Protein–RNA interactions for Protein: Q96QK1

VPS35, Vacuolar protein sorting-associated protein 35, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35Q96QK1 Y_RNA.298-201ENST00000364960 107 ntBASIC-0.42□□□□□ -2.48
VPS35Q96QK1 Y_RNA.337-201ENST00000365312 102 ntBASIC-0.42□□□□□ -2.48
VPS35Q96QK1 Y_RNA.435-201ENST00000384095 112 ntBASIC-0.42□□□□□ -2.48
VPS35Q96QK1 AC109327.2-201ENST00000448339 378 ntBASIC-0.42□□□□□ -2.48
VPS35Q96QK1 MIR4645-201ENST00000583158 77 ntBASIC-0.42□□□□□ -2.48
VPS35Q96QK1 MIR148A-201ENST00000362215 68 ntBASIC-0.43□□□□□ -2.48
VPS35Q96QK1 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.43□□□□□ -2.48
VPS35Q96QK1 Y_RNA.459-201ENST00000384251 102 ntBASIC-0.43□□□□□ -2.48
VPS35Q96QK1 Y_RNA.478-201ENST00000384358 107 ntBASIC-0.43□□□□□ -2.48
VPS35Q96QK1 Y_RNA.556-201ENST00000384677 113 ntBASIC-0.43□□□□□ -2.48
VPS35Q96QK1 MIR106A-201ENST00000384870 81 ntBASIC-0.43□□□□□ -2.48
VPS35Q96QK1 MIR519A1-201ENST00000385257 85 ntBASIC-0.43□□□□□ -2.48
VPS35Q96QK1 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.43□□□□□ -2.48
VPS35Q96QK1 RNA5SP300-201ENST00000391197 107 ntBASIC-0.43□□□□□ -2.48
VPS35Q96QK1 RNU7-2P-201ENST00000516096 62 ntBASIC-0.43□□□□□ -2.48
VPS35Q96QK1 RNU6-320P-201ENST00000516511 106 ntBASIC-0.43□□□□□ -2.48
VPS35Q96QK1 MIR3666-201ENST00000607845 111 ntBASIC-0.43□□□□□ -2.48
VPS35Q96QK1 MIR655-201ENST00000362159 97 ntBASIC-0.44□□□□□ -2.48
VPS35Q96QK1 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.44□□□□□ -2.48
VPS35Q96QK1 SNORA63-201ENST00000363450 132 ntBASIC-0.44□□□□□ -2.48
VPS35Q96QK1 RNU6-865P-201ENST00000364772 107 ntBASIC-0.44□□□□□ -2.48
VPS35Q96QK1 Y_RNA.350-201ENST00000365409 98 ntBASIC-0.44□□□□□ -2.48
VPS35Q96QK1 SNORD63B-201ENST00000411005 70 ntBASIC-0.44□□□□□ -2.48
VPS35Q96QK1 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.44□□□□□ -2.48
VPS35Q96QK1 Y_RNA.668-201ENST00000516233 93 ntBASIC-0.44□□□□□ -2.48
VPS35Q96QK1 RNU7-13P-201ENST00000516413 62 ntBASIC-0.44□□□□□ -2.48
VPS35Q96QK1 MIR3920-201ENST00000581751 86 ntBASIC-0.44□□□□□ -2.48
VPS35Q96QK1 AC084368.1-201ENST00000620935 65 ntBASIC-0.44□□□□□ -2.48
VPS35Q96QK1 MIR6844-201ENST00000637122 62 ntBASIC-0.44□□□□□ -2.48
VPS35Q96QK1 RNU6-170P-201ENST00000362832 104 ntBASIC-0.45□□□□□ -2.48
VPS35Q96QK1 SNORD49B-201ENST00000365172 72 ntBASIC-0.45□□□□□ -2.48
VPS35Q96QK1 RNU7-195P-201ENST00000458793 62 ntBASIC-0.45□□□□□ -2.48
VPS35Q96QK1 SNORA25.13-201ENST00000516395 103 ntBASIC-0.45□□□□□ -2.48
VPS35Q96QK1 Y_RNA.812-201ENST00000610788 101 ntBASIC-0.45□□□□□ -2.48
VPS35Q96QK1 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.45□□□□□ -2.48
VPS35Q96QK1 Y_RNA.784-201ENST00000613803 101 ntBASIC-0.45□□□□□ -2.48
VPS35Q96QK1 Y_RNA.787-201ENST00000616522 101 ntBASIC-0.45□□□□□ -2.48
VPS35Q96QK1 Y_RNA.780-201ENST00000617336 101 ntBASIC-0.45□□□□□ -2.48
VPS35Q96QK1 Y_RNA.801-201ENST00000619005 101 ntBASIC-0.45□□□□□ -2.48
VPS35Q96QK1 RNA5SP98-201ENST00000363158 137 ntBASIC-0.46□□□□□ -2.48
VPS35Q96QK1 RNU6-312P-201ENST00000364629 107 ntBASIC-0.46□□□□□ -2.48
VPS35Q96QK1 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.46□□□□□ -2.48
VPS35Q96QK1 RNU6-738P-201ENST00000384531 106 ntBASIC-0.46□□□□□ -2.48
VPS35Q96QK1 RNU6-588P-201ENST00000410281 105 ntBASIC-0.46□□□□□ -2.48
VPS35Q96QK1 AC244250.2-201ENST00000418731 148 ntBASIC-0.46□□□□□ -2.48
VPS35Q96QK1 RNU7-74P-201ENST00000459104 62 ntBASIC-0.46□□□□□ -2.48
VPS35Q96QK1 Y_RNA.651-201ENST00000459380 103 ntBASIC-0.46□□□□□ -2.48
VPS35Q96QK1 AC009779.6-201ENST00000603972 165 ntBASIC-0.46□□□□□ -2.48
VPS35Q96QK1 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.47□□□□□ -2.48
VPS35Q96QK1 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.47□□□□□ -2.48
VPS35Q96QK1 SNORD114-28-201ENST00000363610 72 ntBASIC-0.47□□□□□ -2.48
VPS35Q96QK1 SNORD18B-201ENST00000365659 72 ntBASIC-0.47□□□□□ -2.48
VPS35Q96QK1 MIR3646-201ENST00000578301 84 ntBASIC-0.47□□□□□ -2.48
VPS35Q96QK1 MIR3128-201ENST00000581957 66 ntBASIC-0.47□□□□□ -2.48
VPS35Q96QK1 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.47□□□□□ -2.48
VPS35Q96QK1 SNORD14C-201ENST00000365382 88 ntBASIC-0.48□□□□□ -2.49
VPS35Q96QK1 RNU6-47P-201ENST00000383866 107 ntBASIC-0.48□□□□□ -2.49
VPS35Q96QK1 RNU6-811P-201ENST00000384069 107 ntBASIC-0.48□□□□□ -2.49
VPS35Q96QK1 RNU6-616P-201ENST00000384353 107 ntBASIC-0.48□□□□□ -2.49
VPS35Q96QK1 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.48□□□□□ -2.49
VPS35Q96QK1 MTCYBP9-201ENST00000431021 303 ntBASIC-0.48□□□□□ -2.49
VPS35Q96QK1 MIR5589-201ENST00000579442 60 ntBASIC-0.48□□□□□ -2.49
VPS35Q96QK1 MIR6507-201ENST00000613630 70 ntBASIC-0.48□□□□□ -2.49
VPS35Q96QK1 MIR376B-201ENST00000614515 100 ntBASIC-0.48□□□□□ -2.49
VPS35Q96QK1 Y_RNA.60-201ENST00000362831 98 ntBASIC-0.49□□□□□ -2.49
VPS35Q96QK1 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.49□□□□□ -2.49
VPS35Q96QK1 RNU6-508P-201ENST00000363231 103 ntBASIC-0.49□□□□□ -2.49
VPS35Q96QK1 RNU6-1020P-201ENST00000363684 107 ntBASIC-0.49□□□□□ -2.49
VPS35Q96QK1 RNA5SP205-201ENST00000364653 136 ntBASIC-0.49□□□□□ -2.49
VPS35Q96QK1 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.49□□□□□ -2.49
VPS35Q96QK1 RNU6-571P-201ENST00000384128 107 ntBASIC-0.49□□□□□ -2.49
VPS35Q96QK1 RNU6-524P-201ENST00000384270 107 ntBASIC-0.49□□□□□ -2.49
VPS35Q96QK1 MIR516B1-201ENST00000385211 90 ntBASIC-0.49□□□□□ -2.49
VPS35Q96QK1 MIR1302-3-201ENST00000408128 138 ntBASIC-0.49□□□□□ -2.49
VPS35Q96QK1 SNORD126-201ENST00000459475 77 ntBASIC-0.49□□□□□ -2.49
VPS35Q96QK1 RNY4P20-201ENST00000516678 93 ntBASIC-0.49□□□□□ -2.49
VPS35Q96QK1 MTND5P40-201ENST00000559945 246 ntBASIC-0.49□□□□□ -2.49
VPS35Q96QK1 MIR8064-201ENST00000612863 90 ntBASIC-0.49□□□□□ -2.49
VPS35Q96QK1 RN7SL660P-201ENST00000614852 299 ntBASIC-0.49□□□□□ -2.49
VPS35Q96QK1 RNA5SP275-201ENST00000363936 118 ntBASIC-0.5□□□□□ -2.49
VPS35Q96QK1 SNORD115-35-201ENST00000365122 82 ntBASIC-0.5□□□□□ -2.49
VPS35Q96QK1 AC096531.1-201ENST00000419107 107 ntBASIC-0.5□□□□□ -2.49
VPS35Q96QK1 RNU6-1219P-201ENST00000516143 112 ntBASIC-0.5□□□□□ -2.49
VPS35Q96QK1 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.5□□□□□ -2.49
VPS35Q96QK1 RNU6-111P-201ENST00000517179 105 ntBASIC-0.5□□□□□ -2.49
VPS35Q96QK1 AL590491.3-201ENST00000610731 82 ntBASIC-0.5□□□□□ -2.49
VPS35Q96QK1 Y_RNA.83-201ENST00000363005 113 ntBASIC-0.51□□□□□ -2.49
VPS35Q96QK1 Y_RNA.584-201ENST00000391090 114 ntBASIC-0.51□□□□□ -2.49
VPS35Q96QK1 MIR1912-201ENST00000410389 80 ntBASIC-0.51□□□□□ -2.49
VPS35Q96QK1 RNU6-1023P-201ENST00000516137 106 ntBASIC-0.51□□□□□ -2.49
VPS35Q96QK1 Y_RNA.680-201ENST00000516441 93 ntBASIC-0.51□□□□□ -2.49
VPS35Q96QK1 Y_RNA.690-201ENST00000516603 95 ntBASIC-0.51□□□□□ -2.49
VPS35Q96QK1 AP001180.6-201ENST00000584918 159 ntBASIC-0.51□□□□□ -2.49
VPS35Q96QK1 MIR4788-201ENST00000639104 80 ntBASIC-0.51□□□□□ -2.49
VPS35Q96QK1 Y_RNA.200-201ENST00000364018 102 ntBASIC-0.52□□□□□ -2.49
VPS35Q96QK1 RNU6-309P-201ENST00000364573 106 ntBASIC-0.52□□□□□ -2.49
VPS35Q96QK1 RNU1-141P-201ENST00000364623 158 ntBASIC-0.52□□□□□ -2.49
VPS35Q96QK1 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.52□□□□□ -2.49
VPS35Q96QK1 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.52□□□□□ -2.49
VPS35Q96QK1 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.52□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 232.1 ms