Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 MTCYBP6-201ENST00000441810 138 ntBASIC-0.57□□□□□ -2.5
PKNOX2Q96KN3 RNU7-164P-201ENST00000459221 62 ntBASIC-0.57□□□□□ -2.5
PKNOX2Q96KN3 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.57□□□□□ -2.5
PKNOX2Q96KN3 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.57□□□□□ -2.5
PKNOX2Q96KN3 MIR548AZ-201ENST00000616567 95 ntBASIC-0.57□□□□□ -2.5
PKNOX2Q96KN3 AP001362.1-201ENST00000625165 124 ntBASIC-0.57□□□□□ -2.5
PKNOX2Q96KN3 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.58□□□□□ -2.5
PKNOX2Q96KN3 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.58□□□□□ -2.5
PKNOX2Q96KN3 SNORD63B-201ENST00000411005 70 ntBASIC-0.58□□□□□ -2.5
PKNOX2Q96KN3 MTATP6P21-201ENST00000440681 189 ntBASIC-0.58□□□□□ -2.5
PKNOX2Q96KN3 RNU7-195P-201ENST00000458793 62 ntBASIC-0.58□□□□□ -2.5
PKNOX2Q96KN3 MTND5P40-201ENST00000559945 246 ntBASIC-0.58□□□□□ -2.5
PKNOX2Q96KN3 MIR4308-201ENST00000580634 81 ntBASIC-0.58□□□□□ -2.5
PKNOX2Q96KN3 MIR4263-201ENST00000584745 83 ntBASIC-0.58□□□□□ -2.5
PKNOX2Q96KN3 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.59□□□□□ -2.5
PKNOX2Q96KN3 RNU1-141P-201ENST00000364623 158 ntBASIC-0.59□□□□□ -2.5
PKNOX2Q96KN3 SNORD77B-201ENST00000391112 67 ntBASIC-0.59□□□□□ -2.5
PKNOX2Q96KN3 RNA5SP25-201ENST00000410815 110 ntBASIC-0.59□□□□□ -2.5
PKNOX2Q96KN3 RNU7-123P-201ENST00000515911 60 ntBASIC-0.59□□□□□ -2.5
PKNOX2Q96KN3 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.59□□□□□ -2.5
PKNOX2Q96KN3 RN7SL660P-201ENST00000614852 299 ntBASIC-0.59□□□□□ -2.5
PKNOX2Q96KN3 FTX_2.1-201ENST00000618816 94 ntBASIC-0.59□□□□□ -2.5
PKNOX2Q96KN3 RNU6-170P-201ENST00000362832 104 ntBASIC-0.6□□□□□ -2.51
PKNOX2Q96KN3 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.6□□□□□ -2.51
PKNOX2Q96KN3 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.6□□□□□ -2.51
PKNOX2Q96KN3 RNU6-811P-201ENST00000384069 107 ntBASIC-0.6□□□□□ -2.51
PKNOX2Q96KN3 RNU6-768P-201ENST00000384683 107 ntBASIC-0.6□□□□□ -2.51
PKNOX2Q96KN3 AC244250.2-201ENST00000418731 148 ntBASIC-0.6□□□□□ -2.51
PKNOX2Q96KN3 RPS29P8-201ENST00000445109 171 ntBASIC-0.6□□□□□ -2.51
PKNOX2Q96KN3 MTATP8P1-201ENST00000467115 207 ntBASIC-0.6□□□□□ -2.51
PKNOX2Q96KN3 MIR6507-201ENST00000613630 70 ntBASIC-0.6□□□□□ -2.51
PKNOX2Q96KN3 MIR4788-201ENST00000639104 80 ntBASIC-0.6□□□□□ -2.51
PKNOX2Q96KN3 MIR655-201ENST00000362159 97 ntBASIC-0.61□□□□□ -2.51
PKNOX2Q96KN3 Y_RNA.75-201ENST00000362927 97 ntBASIC-0.61□□□□□ -2.51
PKNOX2Q96KN3 RNU6-818P-201ENST00000364837 108 ntBASIC-0.61□□□□□ -2.51
PKNOX2Q96KN3 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.61□□□□□ -2.51
PKNOX2Q96KN3 RNU6-524P-201ENST00000384270 107 ntBASIC-0.61□□□□□ -2.51
PKNOX2Q96KN3 Y_RNA.574-201ENST00000384766 95 ntBASIC-0.61□□□□□ -2.51
PKNOX2Q96KN3 MIR224-201ENST00000384889 81 ntBASIC-0.61□□□□□ -2.51
PKNOX2Q96KN3 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.61□□□□□ -2.51
PKNOX2Q96KN3 MIR548H3-201ENST00000408771 118 ntBASIC-0.61□□□□□ -2.51
PKNOX2Q96KN3 RNU7-2P-201ENST00000516096 62 ntBASIC-0.61□□□□□ -2.51
PKNOX2Q96KN3 U6.106-201ENST00000636360 105 ntBASIC-0.61□□□□□ -2.51
PKNOX2Q96KN3 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.61□□□□□ -2.51
PKNOX2Q96KN3 SNORD95.1-201ENST00000364099 68 ntBASIC-0.62□□□□□ -2.51
PKNOX2Q96KN3 U8.6-201ENST00000364939 135 ntBASIC-0.62□□□□□ -2.51
PKNOX2Q96KN3 RNU6-284P-201ENST00000411105 106 ntBASIC-0.62□□□□□ -2.51
PKNOX2Q96KN3 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.62□□□□□ -2.51
PKNOX2Q96KN3 Y_RNA.298-201ENST00000364960 107 ntBASIC-0.63□□□□□ -2.51
PKNOX2Q96KN3 Y_RNA.396-201ENST00000383949 103 ntBASIC-0.63□□□□□ -2.51
PKNOX2Q96KN3 RNU6-571P-201ENST00000384128 107 ntBASIC-0.63□□□□□ -2.51
PKNOX2Q96KN3 Y_RNA.626-201ENST00000411288 95 ntBASIC-0.63□□□□□ -2.51
PKNOX2Q96KN3 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-0.63□□□□□ -2.51
PKNOX2Q96KN3 MIR3149-201ENST00000584629 83 ntBASIC-0.63□□□□□ -2.51
PKNOX2Q96KN3 AC009779.6-201ENST00000603972 165 ntBASIC-0.63□□□□□ -2.51
PKNOX2Q96KN3 AC069503.3-201ENST00000618674 145 ntBASIC-0.63□□□□□ -2.51
PKNOX2Q96KN3 RNA5SP205-201ENST00000364653 136 ntBASIC-0.64□□□□□ -2.51
PKNOX2Q96KN3 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.64□□□□□ -2.51
PKNOX2Q96KN3 SNORD75.1-201ENST00000408373 60 ntBASIC-0.64□□□□□ -2.51
PKNOX2Q96KN3 RNU2-38P-201ENST00000410856 79 ntBASIC-0.64□□□□□ -2.51
PKNOX2Q96KN3 Y_RNA.701-201ENST00000516812 110 ntBASIC-0.64□□□□□ -2.51
PKNOX2Q96KN3 MIR4473-201ENST00000583731 91 ntBASIC-0.64□□□□□ -2.51
PKNOX2Q96KN3 AC044792.1-201ENST00000593294 196 ntBASIC-0.64□□□□□ -2.51
PKNOX2Q96KN3 uc_338.10-201ENST00000621872 182 ntBASIC-0.64□□□□□ -2.51
PKNOX2Q96KN3 Y_RNA.60-201ENST00000362831 98 ntBASIC-0.65□□□□□ -2.51
PKNOX2Q96KN3 SNORD115-35-201ENST00000365122 82 ntBASIC-0.65□□□□□ -2.51
PKNOX2Q96KN3 RNY4P3-201ENST00000365254 95 ntBASIC-0.65□□□□□ -2.51
PKNOX2Q96KN3 MIR181B2-201ENST00000385004 89 ntBASIC-0.65□□□□□ -2.51
PKNOX2Q96KN3 MIR617-201ENST00000385030 97 ntBASIC-0.65□□□□□ -2.51
PKNOX2Q96KN3 SNORA75.5-201ENST00000391291 81 ntBASIC-0.65□□□□□ -2.51
PKNOX2Q96KN3 AL603914.1-201ENST00000401964 204 ntBASIC-0.65□□□□□ -2.51
PKNOX2Q96KN3 AC093423.1-201ENST00000440817 142 ntBASIC-0.65□□□□□ -2.51
PKNOX2Q96KN3 RNU7-106P-201ENST00000459514 67 ntBASIC-0.65□□□□□ -2.51
PKNOX2Q96KN3 RNA5SP476-201ENST00000516613 103 ntBASIC-0.65□□□□□ -2.51
PKNOX2Q96KN3 RNU7-188P-201ENST00000517063 64 ntBASIC-0.65□□□□□ -2.51
PKNOX2Q96KN3 Y_RNA.720-201ENST00000517166 92 ntBASIC-0.65□□□□□ -2.51
PKNOX2Q96KN3 MIR376B-201ENST00000614515 100 ntBASIC-0.65□□□□□ -2.51
PKNOX2Q96KN3 SNORD114-15-201ENST00000364687 72 ntBASIC-0.66□□□□□ -2.52
PKNOX2Q96KN3 SNORD115-44-201ENST00000365391 82 ntBASIC-0.66□□□□□ -2.52
PKNOX2Q96KN3 Y_RNA.422-201ENST00000384054 114 ntBASIC-0.66□□□□□ -2.52
PKNOX2Q96KN3 MIR519E-201ENST00000385075 84 ntBASIC-0.66□□□□□ -2.52
PKNOX2Q96KN3 MIR548F4-201ENST00000408515 105 ntBASIC-0.66□□□□□ -2.52
PKNOX2Q96KN3 RNU4-63P-201ENST00000411313 118 ntBASIC-0.66□□□□□ -2.52
PKNOX2Q96KN3 MTND2P23-201ENST00000422990 651 ntBASIC-0.66□□□□□ -2.52
PKNOX2Q96KN3 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.66□□□□□ -2.52
PKNOX2Q96KN3 SNORD127-201ENST00000458892 86 ntBASIC-0.66□□□□□ -2.52
PKNOX2Q96KN3 AC114755.3-201ENST00000481111 251 ntBASIC-0.66□□□□□ -2.52
PKNOX2Q96KN3 AL117351.2-201ENST00000513571 157 ntBASIC-0.66□□□□□ -2.52
PKNOX2Q96KN3 MIR548AG2-201ENST00000581228 64 ntBASIC-0.66□□□□□ -2.52
PKNOX2Q96KN3 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.67□□□□□ -2.52
PKNOX2Q96KN3 SNORD114-11-201ENST00000363738 75 ntBASIC-0.67□□□□□ -2.52
PKNOX2Q96KN3 RNU6-867P-201ENST00000364956 107 ntBASIC-0.67□□□□□ -2.52
PKNOX2Q96KN3 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.67□□□□□ -2.52
PKNOX2Q96KN3 RNU6-480P-201ENST00000384332 107 ntBASIC-0.67□□□□□ -2.52
PKNOX2Q96KN3 RNU6-616P-201ENST00000384353 107 ntBASIC-0.67□□□□□ -2.52
PKNOX2Q96KN3 RNU6-30P-201ENST00000384561 107 ntBASIC-0.67□□□□□ -2.52
PKNOX2Q96KN3 MT-TQ-201ENST00000387372 72 ntBASIC-0.67□□□□□ -2.52
PKNOX2Q96KN3 SNORD58.1-201ENST00000391313 66 ntBASIC-0.67□□□□□ -2.52
PKNOX2Q96KN3 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-0.67□□□□□ -2.52
PKNOX2Q96KN3 YWHAEP2-201ENST00000580066 112 ntBASIC-0.67□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 199.1 ms