Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 Y_RNA.164-201ENST00000363709 102 ntBASIC0.87□□□□□ -2.27
CDK5RAP3Q96JB5 RNU6-291P-201ENST00000384720 107 ntBASIC0.87□□□□□ -2.27
CDK5RAP3Q96JB5 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.87□□□□□ -2.27
CDK5RAP3Q96JB5 MIR373-201ENST00000362273 69 ntBASIC0.86□□□□□ -2.27
CDK5RAP3Q96JB5 RNU1-93P-201ENST00000364704 169 ntBASIC0.86□□□□□ -2.27
CDK5RAP3Q96JB5 RNU6-1056P-201ENST00000383996 107 ntBASIC0.86□□□□□ -2.27
CDK5RAP3Q96JB5 RNU6-1081P-201ENST00000384537 107 ntBASIC0.86□□□□□ -2.27
CDK5RAP3Q96JB5 MIR18A-201ENST00000362310 71 ntBASIC0.85□□□□□ -2.27
CDK5RAP3Q96JB5 RNU6-1313P-201ENST00000362622 102 ntBASIC0.85□□□□□ -2.27
CDK5RAP3Q96JB5 SNORA36.2-201ENST00000384004 127 ntBASIC0.85□□□□□ -2.27
CDK5RAP3Q96JB5 SNORD38.2-201ENST00000384470 69 ntBASIC0.85□□□□□ -2.27
CDK5RAP3Q96JB5 MIR1276-201ENST00000408707 83 ntBASIC0.85□□□□□ -2.27
CDK5RAP3Q96JB5 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.85□□□□□ -2.27
CDK5RAP3Q96JB5 AL353813.1-201ENST00000440700 253 ntBASIC0.85□□□□□ -2.27
CDK5RAP3Q96JB5 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.85□□□□□ -2.27
CDK5RAP3Q96JB5 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.85□□□□□ -2.27
CDK5RAP3Q96JB5 AC068339.1-201ENST00000526965 141 ntBASIC0.85□□□□□ -2.27
CDK5RAP3Q96JB5 MIR8070-201ENST00000616510 88 ntBASIC0.85□□□□□ -2.27
CDK5RAP3Q96JB5 Y_RNA.32-201ENST00000362589 110 ntBASIC0.84□□□□□ -2.27
CDK5RAP3Q96JB5 Y_RNA.49-201ENST00000362714 112 ntBASIC0.84□□□□□ -2.27
CDK5RAP3Q96JB5 RNU6-110P-201ENST00000384508 104 ntBASIC0.84□□□□□ -2.27
CDK5RAP3Q96JB5 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.84□□□□□ -2.27
CDK5RAP3Q96JB5 AC004941.2-201ENST00000427009 228 ntBASIC0.84□□□□□ -2.27
CDK5RAP3Q96JB5 BX276092.1-201ENST00000427368 251 ntBASIC0.84□□□□□ -2.27
CDK5RAP3Q96JB5 RNU6-1018P-201ENST00000516577 106 ntBASIC0.84□□□□□ -2.27
CDK5RAP3Q96JB5 MIR6129-201ENST00000616087 109 ntBASIC0.84□□□□□ -2.27
CDK5RAP3Q96JB5 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.84□□□□□ -2.27
CDK5RAP3Q96JB5 RNU6-834P-201ENST00000362367 110 ntBASIC0.83□□□□□ -2.28
CDK5RAP3Q96JB5 Y_RNA.174-201ENST00000363781 105 ntBASIC0.83□□□□□ -2.28
CDK5RAP3Q96JB5 Y_RNA.281-201ENST00000364774 94 ntBASIC0.83□□□□□ -2.28
CDK5RAP3Q96JB5 U8.6-201ENST00000364939 135 ntBASIC0.83□□□□□ -2.28
CDK5RAP3Q96JB5 RNU6-412P-201ENST00000516434 106 ntBASIC0.83□□□□□ -2.28
CDK5RAP3Q96JB5 SNORA31.14-201ENST00000516728 116 ntBASIC0.83□□□□□ -2.28
CDK5RAP3Q96JB5 uc_338.16-201ENST00000621804 95 ntBASIC0.83□□□□□ -2.28
CDK5RAP3Q96JB5 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.83□□□□□ -2.28
CDK5RAP3Q96JB5 Y_RNA.56-201ENST00000362798 112 ntBASIC0.82□□□□□ -2.28
CDK5RAP3Q96JB5 RNU4-45P-201ENST00000365469 141 ntBASIC0.82□□□□□ -2.28
CDK5RAP3Q96JB5 RNU6-469P-201ENST00000516253 101 ntBASIC0.82□□□□□ -2.28
CDK5RAP3Q96JB5 MTND5P40-201ENST00000559945 246 ntBASIC0.82□□□□□ -2.28
CDK5RAP3Q96JB5 MIR5009-201ENST00000578736 100 ntBASIC0.82□□□□□ -2.28
CDK5RAP3Q96JB5 MIR548H5-201ENST00000580314 60 ntBASIC0.82□□□□□ -2.28
CDK5RAP3Q96JB5 MIR6504-201ENST00000613520 61 ntBASIC0.82□□□□□ -2.28
CDK5RAP3Q96JB5 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.82□□□□□ -2.28
CDK5RAP3Q96JB5 SNORA25.9-201ENST00000365087 128 ntBASIC0.81□□□□□ -2.28
CDK5RAP3Q96JB5 SNORD114-22-201ENST00000365423 72 ntBASIC0.81□□□□□ -2.28
CDK5RAP3Q96JB5 RNY1P8-201ENST00000383970 114 ntBASIC0.81□□□□□ -2.28
CDK5RAP3Q96JB5 RNU6-1201P-201ENST00000384227 107 ntBASIC0.81□□□□□ -2.28
CDK5RAP3Q96JB5 MIR644A-201ENST00000385262 94 ntBASIC0.81□□□□□ -2.28
CDK5RAP3Q96JB5 MIR6835-201ENST00000621552 64 ntBASIC0.81□□□□□ -2.28
CDK5RAP3Q96JB5 HSBP1P2-201ENST00000299671 229 ntBASIC0.8□□□□□ -2.28
CDK5RAP3Q96JB5 Y_RNA.191-201ENST00000363972 113 ntBASIC0.8□□□□□ -2.28
CDK5RAP3Q96JB5 RNA5SP245-201ENST00000364239 121 ntBASIC0.8□□□□□ -2.28
CDK5RAP3Q96JB5 RNU6-1107P-201ENST00000364817 104 ntBASIC0.8□□□□□ -2.28
CDK5RAP3Q96JB5 MIR520E-201ENST00000384867 87 ntBASIC0.8□□□□□ -2.28
CDK5RAP3Q96JB5 MIR3678-201ENST00000578455 94 ntBASIC0.8□□□□□ -2.28
CDK5RAP3Q96JB5 RNU7-10P-201ENST00000607194 63 ntBASIC0.8□□□□□ -2.28
CDK5RAP3Q96JB5 AL442128.1-201ENST00000615151 90 ntBASIC0.8□□□□□ -2.28
CDK5RAP3Q96JB5 SNORD38.1-201ENST00000363863 68 ntBASIC0.79□□□□□ -2.28
CDK5RAP3Q96JB5 Y_RNA.247-201ENST00000364500 92 ntBASIC0.79□□□□□ -2.28
CDK5RAP3Q96JB5 Y_RNA.273-201ENST00000364703 102 ntBASIC0.79□□□□□ -2.28
CDK5RAP3Q96JB5 MIR635-201ENST00000384830 98 ntBASIC0.79□□□□□ -2.28
CDK5RAP3Q96JB5 SPINT5P-201ENST00000448174 155 ntBASIC0.79□□□□□ -2.28
CDK5RAP3Q96JB5 RNU6-1006P-201ENST00000516998 103 ntBASIC0.79□□□□□ -2.28
CDK5RAP3Q96JB5 MIR548AI-201ENST00000579940 88 ntBASIC0.79□□□□□ -2.28
CDK5RAP3Q96JB5 MIR577-201ENST00000385196 96 ntBASIC0.78□□□□□ -2.28
CDK5RAP3Q96JB5 MIR548I2-201ENST00000408348 149 ntBASIC0.78□□□□□ -2.28
CDK5RAP3Q96JB5 AC092628.1-201ENST00000436250 252 ntBASIC0.78□□□□□ -2.28
CDK5RAP3Q96JB5 MIR4694-201ENST00000578534 80 ntBASIC0.78□□□□□ -2.28
CDK5RAP3Q96JB5 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.77□□□□□ -2.29
CDK5RAP3Q96JB5 Y_RNA.323-201ENST00000365157 109 ntBASIC0.77□□□□□ -2.29
CDK5RAP3Q96JB5 RNU6-1014P-201ENST00000383940 103 ntBASIC0.77□□□□□ -2.29
CDK5RAP3Q96JB5 RNU6-571P-201ENST00000384128 107 ntBASIC0.77□□□□□ -2.29
CDK5RAP3Q96JB5 MIR140-201ENST00000385282 100 ntBASIC0.77□□□□□ -2.29
CDK5RAP3Q96JB5 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.77□□□□□ -2.29
CDK5RAP3Q96JB5 SNRPGP12-201ENST00000449481 213 ntBASIC0.77□□□□□ -2.29
CDK5RAP3Q96JB5 RPS29P1-201ENST00000465274 159 ntBASIC0.77□□□□□ -2.29
CDK5RAP3Q96JB5 RNU6-850P-201ENST00000516934 103 ntBASIC0.77□□□□□ -2.29
CDK5RAP3Q96JB5 CYP3A137P-201ENST00000562436 69 ntBASIC0.77□□□□□ -2.29
CDK5RAP3Q96JB5 AC138907.6-201ENST00000568401 126 ntBASIC0.77□□□□□ -2.29
CDK5RAP3Q96JB5 AC138869.1-201ENST00000568623 124 ntBASIC0.77□□□□□ -2.29
CDK5RAP3Q96JB5 AL590095.2-201ENST00000604136 117 ntBASIC0.77□□□□□ -2.29
CDK5RAP3Q96JB5 RNU6-90P-201ENST00000606352 106 ntBASIC0.77□□□□□ -2.29
CDK5RAP3Q96JB5 RNU6-1290P-201ENST00000362957 109 ntBASIC0.76□□□□□ -2.29
CDK5RAP3Q96JB5 MIR508-201ENST00000384857 115 ntBASIC0.76□□□□□ -2.29
CDK5RAP3Q96JB5 MIR548G-201ENST00000408442 89 ntBASIC0.76□□□□□ -2.29
CDK5RAP3Q96JB5 Y_RNA.629-201ENST00000411368 105 ntBASIC0.76□□□□□ -2.29
CDK5RAP3Q96JB5 TRAJ51-201ENST00000504127 63 ntBASIC0.76□□□□□ -2.29
CDK5RAP3Q96JB5 MIR4452-201ENST00000583004 71 ntBASIC0.76□□□□□ -2.29
CDK5RAP3Q96JB5 AC096720.1-201ENST00000604441 183 ntBASIC0.76□□□□□ -2.29
CDK5RAP3Q96JB5 RNY3P2-201ENST00000362918 102 ntBASIC0.75□□□□□ -2.29
CDK5RAP3Q96JB5 RNU6-832P-201ENST00000363319 107 ntBASIC0.75□□□□□ -2.29
CDK5RAP3Q96JB5 Y_RNA.291-201ENST00000364886 113 ntBASIC0.75□□□□□ -2.29
CDK5RAP3Q96JB5 Y_RNA.377-201ENST00000365644 108 ntBASIC0.75□□□□□ -2.29
CDK5RAP3Q96JB5 RNU6-170P-201ENST00000362832 104 ntBASIC0.74□□□□□ -2.29
CDK5RAP3Q96JB5 SNORD18A-201ENST00000363753 72 ntBASIC0.74□□□□□ -2.29
CDK5RAP3Q96JB5 RNU6-589P-201ENST00000516485 107 ntBASIC0.74□□□□□ -2.29
CDK5RAP3Q96JB5 RNU6-135P-201ENST00000516769 101 ntBASIC0.74□□□□□ -2.29
CDK5RAP3Q96JB5 AC141557.1-201ENST00000540982 400 ntBASIC0.74□□□□□ -2.29
CDK5RAP3Q96JB5 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.74□□□□□ -2.29
CDK5RAP3Q96JB5 RNU6-1099P-201ENST00000363533 107 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 195.7 ms