Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 Y_RNA.377-201ENST00000365644 108 ntBASIC1.14□□□□□ -2.23
ATP2A3Q93084 Y_RNA.467-201ENST00000384297 102 ntBASIC1.14□□□□□ -2.23
ATP2A3Q93084 SNORD111-201ENST00000408139 94 ntBASIC1.14□□□□□ -2.23
ATP2A3Q93084 RNY4P30-201ENST00000410216 95 ntBASIC1.14□□□□□ -2.23
ATP2A3Q93084 MTATP8P2-201ENST00000435212 202 ntBASIC1.14□□□□□ -2.23
ATP2A3Q93084 SCARNA23-201ENST00000516060 130 ntBASIC1.14□□□□□ -2.23
ATP2A3Q93084 AC023827.1-201ENST00000569247 97 ntBASIC1.14□□□□□ -2.23
ATP2A3Q93084 AL442128.1-201ENST00000615151 90 ntBASIC1.14□□□□□ -2.23
ATP2A3Q93084 Y_RNA.818-201ENST00000618813 71 ntBASIC1.14□□□□□ -2.23
ATP2A3Q93084 MIR6788-201ENST00000618842 66 ntBASIC1.14□□□□□ -2.23
ATP2A3Q93084 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.14□□□□□ -2.23
ATP2A3Q93084 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
ATP2A3Q93084 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
ATP2A3Q93084 Y_RNA.107-201ENST00000363190 121 ntBASIC1.13□□□□□ -2.23
ATP2A3Q93084 SNORD114-10-201ENST00000363409 72 ntBASIC1.13□□□□□ -2.23
ATP2A3Q93084 Y_RNA.544-201ENST00000384650 113 ntBASIC1.13□□□□□ -2.23
ATP2A3Q93084 RNU6-644P-201ENST00000391155 98 ntBASIC1.13□□□□□ -2.23
ATP2A3Q93084 SNORD124-201ENST00000459577 104 ntBASIC1.13□□□□□ -2.23
ATP2A3Q93084 RNU7-61P-201ENST00000515897 61 ntBASIC1.13□□□□□ -2.23
ATP2A3Q93084 RNU6-1018P-201ENST00000516577 106 ntBASIC1.13□□□□□ -2.23
ATP2A3Q93084 AC036111.3-201ENST00000526389 112 ntBASIC1.13□□□□□ -2.23
ATP2A3Q93084 AC138749.4-201ENST00000563970 127 ntBASIC1.13□□□□□ -2.23
ATP2A3Q93084 AC106800.4-201ENST00000614905 153 ntBASIC1.13□□□□□ -2.23
ATP2A3Q93084 AL512310.12-203ENST00000640543 90 ntBASIC1.13□□□□□ -2.23
ATP2A3Q93084 RNU4-36P-201ENST00000364294 144 ntBASIC1.12□□□□□ -2.23
ATP2A3Q93084 RNU6-1113P-201ENST00000384348 107 ntBASIC1.12□□□□□ -2.23
ATP2A3Q93084 MIR19B1-201ENST00000384829 87 ntBASIC1.12□□□□□ -2.23
ATP2A3Q93084 MIR548J-201ENST00000408833 112 ntBASIC1.12□□□□□ -2.23
ATP2A3Q93084 Y_RNA.601-201ENST00000410500 113 ntBASIC1.12□□□□□ -2.23
ATP2A3Q93084 SNORD83.1-201ENST00000411362 77 ntBASIC1.12□□□□□ -2.23
ATP2A3Q93084 RNU7-48P-201ENST00000458875 63 ntBASIC1.12□□□□□ -2.23
ATP2A3Q93084 SNORA40.13-201ENST00000516379 120 ntBASIC1.12□□□□□ -2.23
ATP2A3Q93084 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.12□□□□□ -2.23
ATP2A3Q93084 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
ATP2A3Q93084 RNU6-1163P-201ENST00000364516 107 ntBASIC1.11□□□□□ -2.23
ATP2A3Q93084 Y_RNA.290-201ENST00000364879 114 ntBASIC1.11□□□□□ -2.23
ATP2A3Q93084 RNU6-994P-201ENST00000410507 111 ntBASIC1.11□□□□□ -2.23
ATP2A3Q93084 AC004941.2-201ENST00000427009 228 ntBASIC1.11□□□□□ -2.23
ATP2A3Q93084 AC109327.2-201ENST00000448339 378 ntBASIC1.11□□□□□ -2.23
ATP2A3Q93084 Y_RNA.659-201ENST00000515994 113 ntBASIC1.11□□□□□ -2.23
ATP2A3Q93084 RNU6-162P-201ENST00000516228 103 ntBASIC1.11□□□□□ -2.23
ATP2A3Q93084 RNU6-158P-201ENST00000517104 100 ntBASIC1.11□□□□□ -2.23
ATP2A3Q93084 MALAT1.1-201ENST00000618249 95 ntBASIC1.11□□□□□ -2.23
ATP2A3Q93084 AC012676.2-201ENST00000619258 186 ntBASIC1.11□□□□□ -2.23
ATP2A3Q93084 U6.109-201ENST00000636749 87 ntBASIC1.11□□□□□ -2.23
ATP2A3Q93084 RNU6-369P-201ENST00000362515 102 ntBASIC1.1□□□□□ -2.23
ATP2A3Q93084 Y_RNA.93-201ENST00000363066 109 ntBASIC1.1□□□□□ -2.23
ATP2A3Q93084 Y_RNA.95-201ENST00000363079 95 ntBASIC1.1□□□□□ -2.23
ATP2A3Q93084 RNU6-865P-201ENST00000364772 107 ntBASIC1.1□□□□□ -2.23
ATP2A3Q93084 Y_RNA.694-201ENST00000516677 117 ntBASIC1.1□□□□□ -2.23
ATP2A3Q93084 AC090897.1-201ENST00000580909 226 ntBASIC1.1□□□□□ -2.23
ATP2A3Q93084 SNORD114-21-201ENST00000606412 72 ntBASIC1.1□□□□□ -2.23
ATP2A3Q93084 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.1□□□□□ -2.23
ATP2A3Q93084 MIR6767-201ENST00000637302 66 ntBASIC1.1□□□□□ -2.23
ATP2A3Q93084 RNA5SP133-201ENST00000363368 119 ntBASIC1.09□□□□□ -2.23
ATP2A3Q93084 Y_RNA.588-201ENST00000391254 102 ntBASIC1.09□□□□□ -2.23
ATP2A3Q93084 AC067940.1-201ENST00000458411 300 ntBASIC1.09□□□□□ -2.23
ATP2A3Q93084 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.09□□□□□ -2.23
ATP2A3Q93084 SNORD114-24-201ENST00000365029 72 ntBASIC1.08□□□□□ -2.24
ATP2A3Q93084 MIR200A-201ENST00000384875 90 ntBASIC1.08□□□□□ -2.24
ATP2A3Q93084 MT-TF-201ENST00000387314 71 ntBASIC1.08□□□□□ -2.24
ATP2A3Q93084 SNORA25.16-201ENST00000516741 121 ntBASIC1.08□□□□□ -2.24
ATP2A3Q93084 MIR4491-201ENST00000581087 68 ntBASIC1.08□□□□□ -2.24
ATP2A3Q93084 MIR4661-201ENST00000582720 75 ntBASIC1.08□□□□□ -2.24
ATP2A3Q93084 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.08□□□□□ -2.24
ATP2A3Q93084 U7.3-201ENST00000616123 62 ntBASIC1.08□□□□□ -2.24
ATP2A3Q93084 AP001362.1-201ENST00000625165 124 ntBASIC1.08□□□□□ -2.24
ATP2A3Q93084 RNU6-1244P-201ENST00000363614 108 ntBASIC1.07□□□□□ -2.24
ATP2A3Q93084 SNORD38.1-201ENST00000363863 68 ntBASIC1.07□□□□□ -2.24
ATP2A3Q93084 RNY1P2-201ENST00000364820 117 ntBASIC1.07□□□□□ -2.24
ATP2A3Q93084 Y_RNA.369-201ENST00000365568 117 ntBASIC1.07□□□□□ -2.24
ATP2A3Q93084 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.07□□□□□ -2.24
ATP2A3Q93084 RNU4-83P-201ENST00000410863 133 ntBASIC1.07□□□□□ -2.24
ATP2A3Q93084 MIR18B-201ENST00000454574 71 ntBASIC1.07□□□□□ -2.24
ATP2A3Q93084 AC133485.1-201ENST00000567176 124 ntBASIC1.07□□□□□ -2.24
ATP2A3Q93084 RNU6-86P-201ENST00000606534 107 ntBASIC1.07□□□□□ -2.24
ATP2A3Q93084 HSBP1P2-201ENST00000299671 229 ntBASIC1.06□□□□□ -2.24
ATP2A3Q93084 Y_RNA.98-201ENST00000363109 102 ntBASIC1.06□□□□□ -2.24
ATP2A3Q93084 SNORD45B-201ENST00000364617 72 ntBASIC1.06□□□□□ -2.24
ATP2A3Q93084 RNU1-36P-201ENST00000365130 165 ntBASIC1.06□□□□□ -2.24
ATP2A3Q93084 RNU6-934P-201ENST00000365154 107 ntBASIC1.06□□□□□ -2.24
ATP2A3Q93084 RNY1P4-201ENST00000384595 115 ntBASIC1.06□□□□□ -2.24
ATP2A3Q93084 MIR942-201ENST00000401111 86 ntBASIC1.06□□□□□ -2.24
ATP2A3Q93084 MIR548G-201ENST00000408442 89 ntBASIC1.06□□□□□ -2.24
ATP2A3Q93084 FABP5P4-201ENST00000437203 171 ntBASIC1.06□□□□□ -2.24
ATP2A3Q93084 RNU7-185P-201ENST00000459215 60 ntBASIC1.06□□□□□ -2.24
ATP2A3Q93084 Y_RNA.10-201ENST00000362371 110 ntBASIC1.05□□□□□ -2.24
ATP2A3Q93084 Y_RNA.119-201ENST00000363301 96 ntBASIC1.05□□□□□ -2.24
ATP2A3Q93084 Y_RNA.173-201ENST00000363776 113 ntBASIC1.05□□□□□ -2.24
ATP2A3Q93084 Y_RNA.190-201ENST00000363964 101 ntBASIC1.05□□□□□ -2.24
ATP2A3Q93084 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.05□□□□□ -2.24
ATP2A3Q93084 RNU6-447P-201ENST00000410293 104 ntBASIC1.05□□□□□ -2.24
ATP2A3Q93084 RNU6-1118P-201ENST00000410382 104 ntBASIC1.05□□□□□ -2.24
ATP2A3Q93084 RNU6-1076P-201ENST00000410397 104 ntBASIC1.05□□□□□ -2.24
ATP2A3Q93084 RNU6-355P-201ENST00000410427 104 ntBASIC1.05□□□□□ -2.24
ATP2A3Q93084 RNU6-791P-201ENST00000410467 104 ntBASIC1.05□□□□□ -2.24
ATP2A3Q93084 RNU6-705P-201ENST00000410601 104 ntBASIC1.05□□□□□ -2.24
ATP2A3Q93084 RNU6-1100P-201ENST00000410691 104 ntBASIC1.05□□□□□ -2.24
ATP2A3Q93084 RNU6-860P-201ENST00000410860 104 ntBASIC1.05□□□□□ -2.24
ATP2A3Q93084 RNU6-1217P-201ENST00000411276 104 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 167.9 ms