Protein–RNA interactions for Protein: Q92890

UFD1, Ubiquitin recognition factor in ER-associated degradation protein 1, humanhuman

Predictions only

Length 307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1Q92890 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.42□□□□□ -2.48
UFD1Q92890 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.42□□□□□ -2.48
UFD1Q92890 RNU6-918P-201ENST00000391219 106 ntBASIC-0.42□□□□□ -2.48
UFD1Q92890 MIR3920-201ENST00000581751 86 ntBASIC-0.42□□□□□ -2.48
UFD1Q92890 MIR4645-201ENST00000583158 77 ntBASIC-0.42□□□□□ -2.48
UFD1Q92890 AL670379.3-201ENST00000605040 251 ntBASIC-0.42□□□□□ -2.48
UFD1Q92890 RNU6-865P-201ENST00000364772 107 ntBASIC-0.43□□□□□ -2.48
UFD1Q92890 Y_RNA.435-201ENST00000384095 112 ntBASIC-0.43□□□□□ -2.48
UFD1Q92890 SNORD63B-201ENST00000411005 70 ntBASIC-0.43□□□□□ -2.48
UFD1Q92890 RNU7-195P-201ENST00000458793 62 ntBASIC-0.43□□□□□ -2.48
UFD1Q92890 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.43□□□□□ -2.48
UFD1Q92890 RNU7-2P-201ENST00000516096 62 ntBASIC-0.43□□□□□ -2.48
UFD1Q92890 RNU4-71P-201ENST00000516258 113 ntBASIC-0.43□□□□□ -2.48
UFD1Q92890 SNORA25.13-201ENST00000516395 103 ntBASIC-0.43□□□□□ -2.48
UFD1Q92890 RNU7-13P-201ENST00000516413 62 ntBASIC-0.43□□□□□ -2.48
UFD1Q92890 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.43□□□□□ -2.48
UFD1Q92890 MIR6844-201ENST00000637122 62 ntBASIC-0.43□□□□□ -2.48
UFD1Q92890 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.44□□□□□ -2.48
UFD1Q92890 Y_RNA.466-201ENST00000384294 113 ntBASIC-0.44□□□□□ -2.48
UFD1Q92890 Y_RNA.478-201ENST00000384358 107 ntBASIC-0.44□□□□□ -2.48
UFD1Q92890 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.44□□□□□ -2.48
UFD1Q92890 MIR7-2-201ENST00000384970 110 ntBASIC-0.44□□□□□ -2.48
UFD1Q92890 RNU7-74P-201ENST00000459104 62 ntBASIC-0.44□□□□□ -2.48
UFD1Q92890 RNU6-170P-201ENST00000362832 104 ntBASIC-0.45□□□□□ -2.48
UFD1Q92890 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.45□□□□□ -2.48
UFD1Q92890 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.45□□□□□ -2.48
UFD1Q92890 RNU6-312P-201ENST00000364629 107 ntBASIC-0.45□□□□□ -2.48
UFD1Q92890 Y_RNA.556-201ENST00000384677 113 ntBASIC-0.45□□□□□ -2.48
UFD1Q92890 MIR106A-201ENST00000384870 81 ntBASIC-0.45□□□□□ -2.48
UFD1Q92890 RNU6-588P-201ENST00000410281 105 ntBASIC-0.45□□□□□ -2.48
UFD1Q92890 AC109327.2-201ENST00000448339 378 ntBASIC-0.45□□□□□ -2.48
UFD1Q92890 Y_RNA.651-201ENST00000459380 103 ntBASIC-0.45□□□□□ -2.48
UFD1Q92890 MIR4802-201ENST00000581881 80 ntBASIC-0.45□□□□□ -2.48
UFD1Q92890 AC009779.6-201ENST00000603972 165 ntBASIC-0.45□□□□□ -2.48
UFD1Q92890 MIR6759-201ENST00000638110 65 ntBASIC-0.45□□□□□ -2.48
UFD1Q92890 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.46□□□□□ -2.48
UFD1Q92890 Y_RNA.350-201ENST00000365409 98 ntBASIC-0.46□□□□□ -2.48
UFD1Q92890 SNORD18B-201ENST00000365659 72 ntBASIC-0.46□□□□□ -2.48
UFD1Q92890 Y_RNA.459-201ENST00000384251 102 ntBASIC-0.46□□□□□ -2.48
UFD1Q92890 RNU6-524P-201ENST00000384270 107 ntBASIC-0.46□□□□□ -2.48
UFD1Q92890 SNORA32.3-201ENST00000384772 121 ntBASIC-0.46□□□□□ -2.48
UFD1Q92890 MIR516B1-201ENST00000385211 90 ntBASIC-0.46□□□□□ -2.48
UFD1Q92890 MTND5P40-201ENST00000559945 246 ntBASIC-0.46□□□□□ -2.48
UFD1Q92890 MIR3646-201ENST00000578301 84 ntBASIC-0.46□□□□□ -2.48
UFD1Q92890 MIR376B-201ENST00000614515 100 ntBASIC-0.46□□□□□ -2.48
UFD1Q92890 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.46□□□□□ -2.48
UFD1Q92890 RNA5SP98-201ENST00000363158 137 ntBASIC-0.47□□□□□ -2.48
UFD1Q92890 SNORD115-35-201ENST00000365122 82 ntBASIC-0.47□□□□□ -2.48
UFD1Q92890 RNU6-571P-201ENST00000384128 107 ntBASIC-0.47□□□□□ -2.48
UFD1Q92890 Y_RNA.668-201ENST00000516233 93 ntBASIC-0.47□□□□□ -2.48
UFD1Q92890 AP001180.6-201ENST00000584918 159 ntBASIC-0.47□□□□□ -2.48
UFD1Q92890 MIR3666-201ENST00000607845 111 ntBASIC-0.47□□□□□ -2.48
UFD1Q92890 RNU6-508P-201ENST00000363231 103 ntBASIC-0.48□□□□□ -2.49
UFD1Q92890 SNORA63-201ENST00000363450 132 ntBASIC-0.48□□□□□ -2.49
UFD1Q92890 RNU1-141P-201ENST00000364623 158 ntBASIC-0.48□□□□□ -2.49
UFD1Q92890 SNORD49B-201ENST00000365172 72 ntBASIC-0.48□□□□□ -2.49
UFD1Q92890 RNU6-616P-201ENST00000384353 107 ntBASIC-0.48□□□□□ -2.49
UFD1Q92890 RNU6-738P-201ENST00000384531 106 ntBASIC-0.48□□□□□ -2.49
UFD1Q92890 RNY4P20-201ENST00000516678 93 ntBASIC-0.48□□□□□ -2.49
UFD1Q92890 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.48□□□□□ -2.49
UFD1Q92890 MIR5589-201ENST00000579442 60 ntBASIC-0.48□□□□□ -2.49
UFD1Q92890 MIR3128-201ENST00000581957 66 ntBASIC-0.48□□□□□ -2.49
UFD1Q92890 Y_RNA.812-201ENST00000610788 101 ntBASIC-0.48□□□□□ -2.49
UFD1Q92890 Y_RNA.784-201ENST00000613803 101 ntBASIC-0.48□□□□□ -2.49
UFD1Q92890 Y_RNA.787-201ENST00000616522 101 ntBASIC-0.48□□□□□ -2.49
UFD1Q92890 Y_RNA.780-201ENST00000617336 101 ntBASIC-0.48□□□□□ -2.49
UFD1Q92890 Y_RNA.801-201ENST00000619005 101 ntBASIC-0.48□□□□□ -2.49
UFD1Q92890 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.48□□□□□ -2.49
UFD1Q92890 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.49□□□□□ -2.49
UFD1Q92890 RNU6-47P-201ENST00000383866 107 ntBASIC-0.49□□□□□ -2.49
UFD1Q92890 MTCYBP9-201ENST00000431021 303 ntBASIC-0.49□□□□□ -2.49
UFD1Q92890 RNU6-1020P-201ENST00000363684 107 ntBASIC-0.5□□□□□ -2.49
UFD1Q92890 RNU6-309P-201ENST00000364573 106 ntBASIC-0.5□□□□□ -2.49
UFD1Q92890 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.5□□□□□ -2.49
UFD1Q92890 MIR1302-3-201ENST00000408128 138 ntBASIC-0.5□□□□□ -2.49
UFD1Q92890 RNU7-106P-201ENST00000459514 67 ntBASIC-0.5□□□□□ -2.49
UFD1Q92890 Y_RNA.60-201ENST00000362831 98 ntBASIC-0.51□□□□□ -2.49
UFD1Q92890 Y_RNA.584-201ENST00000391090 114 ntBASIC-0.51□□□□□ -2.49
UFD1Q92890 RNA5SP300-201ENST00000391197 107 ntBASIC-0.51□□□□□ -2.49
UFD1Q92890 AL603914.1-201ENST00000401964 204 ntBASIC-0.51□□□□□ -2.49
UFD1Q92890 RNU6-1219P-201ENST00000516143 112 ntBASIC-0.51□□□□□ -2.49
UFD1Q92890 Y_RNA.680-201ENST00000516441 93 ntBASIC-0.51□□□□□ -2.49
UFD1Q92890 Y_RNA.690-201ENST00000516603 95 ntBASIC-0.51□□□□□ -2.49
UFD1Q92890 RNU6-111P-201ENST00000517179 105 ntBASIC-0.51□□□□□ -2.49
UFD1Q92890 AL137067.1-201ENST00000615933 120 ntBASIC-0.51□□□□□ -2.49
UFD1Q92890 uc_338.36-201ENST00000622331 158 ntBASIC-0.51□□□□□ -2.49
UFD1Q92890 Y_RNA.83-201ENST00000363005 113 ntBASIC-0.52□□□□□ -2.49
UFD1Q92890 RNY1P11-201ENST00000363759 113 ntBASIC-0.52□□□□□ -2.49
UFD1Q92890 Y_RNA.200-201ENST00000364018 102 ntBASIC-0.52□□□□□ -2.49
UFD1Q92890 RNU6-239P-201ENST00000390990 99 ntBASIC-0.52□□□□□ -2.49
UFD1Q92890 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.52□□□□□ -2.49
UFD1Q92890 RNU6-1023P-201ENST00000516137 106 ntBASIC-0.52□□□□□ -2.49
UFD1Q92890 RNU6-850P-201ENST00000516934 103 ntBASIC-0.52□□□□□ -2.49
UFD1Q92890 MIR4473-201ENST00000583731 91 ntBASIC-0.52□□□□□ -2.49
UFD1Q92890 AC062037.2-201ENST00000610137 73 ntBASIC-0.52□□□□□ -2.49
UFD1Q92890 MIR548AZ-201ENST00000616567 95 ntBASIC-0.52□□□□□ -2.49
UFD1Q92890 AL162726.3-218ENST00000636401 95 ntBASIC-0.52□□□□□ -2.49
UFD1Q92890 MIR101-1-201ENST00000362265 75 ntBASIC-0.53□□□□□ -2.49
UFD1Q92890 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.53□□□□□ -2.49
UFD1Q92890 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.53□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 172.8 ms