Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 RNU6-1163P-201ENST00000364516 107 ntBASIC-1.29□□□□□ -2.62
TOPBP1Q92547 Y_RNA.252-201ENST00000364556 101 ntBASIC-1.29□□□□□ -2.62
TOPBP1Q92547 RNU6-290P-201ENST00000365212 101 ntBASIC-1.29□□□□□ -2.62
TOPBP1Q92547 SNORA51.5-201ENST00000384126 131 ntBASIC-1.29□□□□□ -2.62
TOPBP1Q92547 SNORD116-29-201ENST00000384516 83 ntBASIC-1.29□□□□□ -2.62
TOPBP1Q92547 MIR517B-201ENST00000385102 67 ntBASIC-1.29□□□□□ -2.62
TOPBP1Q92547 AC022137.1-201ENST00000483735 151 ntBASIC-1.29□□□□□ -2.62
TOPBP1Q92547 RNU6-720P-201ENST00000516363 108 ntBASIC-1.29□□□□□ -2.62
TOPBP1Q92547 SNORA40.17-201ENST00000517256 115 ntBASIC-1.29□□□□□ -2.62
TOPBP1Q92547 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-1.3□□□□□ -2.62
TOPBP1Q92547 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.3□□□□□ -2.62
TOPBP1Q92547 RNU6-571P-201ENST00000384128 107 ntBASIC-1.3□□□□□ -2.62
TOPBP1Q92547 Y_RNA.785-201ENST00000384290 109 ntBASIC-1.3□□□□□ -2.62
TOPBP1Q92547 RNU4-69P-201ENST00000410677 143 ntBASIC-1.3□□□□□ -2.62
TOPBP1Q92547 AP000533.3-201ENST00000447704 118 ntBASIC-1.3□□□□□ -2.62
TOPBP1Q92547 AC007012.1-201ENST00000567192 175 ntBASIC-1.3□□□□□ -2.62
TOPBP1Q92547 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.3□□□□□ -2.62
TOPBP1Q92547 AC021146.9-201ENST00000512503 156 ntBASIC-1.3□□□□□ -2.62
TOPBP1Q92547 RNU2-35P-201ENST00000516446 142 ntBASIC-1.3□□□□□ -2.62
TOPBP1Q92547 MIR6854-201ENST00000614935 69 ntBASIC-1.3□□□□□ -2.62
TOPBP1Q92547 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.31□□□□□ -2.62
TOPBP1Q92547 RNU6-973P-201ENST00000364690 107 ntBASIC-1.31□□□□□ -2.62
TOPBP1Q92547 Y_RNA.516-201ENST00000384541 124 ntBASIC-1.31□□□□□ -2.62
TOPBP1Q92547 Y_RNA.541-201ENST00000384640 113 ntBASIC-1.31□□□□□ -2.62
TOPBP1Q92547 RNY4P36-201ENST00000391116 96 ntBASIC-1.31□□□□□ -2.62
TOPBP1Q92547 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-1.31□□□□□ -2.62
TOPBP1Q92547 AC145423.2-201ENST00000610631 239 ntBASIC-1.31□□□□□ -2.62
TOPBP1Q92547 Y_RNA.5-201ENST00000362334 102 ntBASIC-1.32□□□□□ -2.62
TOPBP1Q92547 Y_RNA.154-201ENST00000363624 102 ntBASIC-1.32□□□□□ -2.62
TOPBP1Q92547 Y_RNA.279-201ENST00000364763 95 ntBASIC-1.32□□□□□ -2.62
TOPBP1Q92547 RNU4-43P-201ENST00000410628 137 ntBASIC-1.32□□□□□ -2.62
TOPBP1Q92547 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.32□□□□□ -2.62
TOPBP1Q92547 RNU6-850P-201ENST00000516934 103 ntBASIC-1.32□□□□□ -2.62
TOPBP1Q92547 RNU2-4P-201ENST00000606190 192 ntBASIC-1.32□□□□□ -2.62
TOPBP1Q92547 AC090574.1-201ENST00000623186 233 ntBASIC-1.32□□□□□ -2.62
TOPBP1Q92547 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.33□□□□□ -2.62
TOPBP1Q92547 SNORA63.7-201ENST00000365579 123 ntBASIC-1.33□□□□□ -2.62
TOPBP1Q92547 MIR1302-11-201ENST00000408051 138 ntBASIC-1.33□□□□□ -2.62
TOPBP1Q92547 MIR1302-9-201ENST00000408365 138 ntBASIC-1.33□□□□□ -2.62
TOPBP1Q92547 MIR1302-10-201ENST00000408734 138 ntBASIC-1.33□□□□□ -2.62
TOPBP1Q92547 Y_RNA.596-201ENST00000410462 109 ntBASIC-1.33□□□□□ -2.62
TOPBP1Q92547 RNU7-2P-201ENST00000516096 62 ntBASIC-1.33□□□□□ -2.62
TOPBP1Q92547 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.33□□□□□ -2.62
TOPBP1Q92547 MIR1302-2-201ENST00000607096 138 ntBASIC-1.33□□□□□ -2.62
TOPBP1Q92547 AC084782.3-201ENST00000612282 578 ntBASIC-1.33□□□□□ -2.62
TOPBP1Q92547 SNORD115-35-201ENST00000365122 82 ntBASIC-1.34□□□□□ -2.62
TOPBP1Q92547 RNU6-690P-201ENST00000365242 106 ntBASIC-1.34□□□□□ -2.62
TOPBP1Q92547 RNU6-1289P-201ENST00000384431 106 ntBASIC-1.34□□□□□ -2.62
TOPBP1Q92547 RNU6-24P-201ENST00000384440 107 ntBASIC-1.34□□□□□ -2.62
TOPBP1Q92547 SNORA49-201ENST00000386157 136 ntBASIC-1.34□□□□□ -2.62
TOPBP1Q92547 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.34□□□□□ -2.62
TOPBP1Q92547 AC092794.1-201ENST00000612734 582 ntBASIC-1.34□□□□□ -2.62
TOPBP1Q92547 Y_RNA.207-201ENST00000364142 106 ntBASIC-1.35□□□□□ -2.62
TOPBP1Q92547 RNU4-24P-201ENST00000364565 139 ntBASIC-1.35□□□□□ -2.62
TOPBP1Q92547 Y_RNA.384-201ENST00000383909 102 ntBASIC-1.35□□□□□ -2.62
TOPBP1Q92547 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.35□□□□□ -2.62
TOPBP1Q92547 SNORD116-6-201ENST00000384711 96 ntBASIC-1.35□□□□□ -2.62
TOPBP1Q92547 MIR376B-201ENST00000614515 100 ntBASIC-1.35□□□□□ -2.62
TOPBP1Q92547 Y_RNA.31-201ENST00000362574 102 ntBASIC-1.35□□□□□ -2.63
TOPBP1Q92547 snoU2_19.2-201ENST00000363024 80 ntBASIC-1.35□□□□□ -2.63
TOPBP1Q92547 Y_RNA.160-201ENST00000363677 92 ntBASIC-1.35□□□□□ -2.63
TOPBP1Q92547 RNU6-978P-201ENST00000364371 103 ntBASIC-1.35□□□□□ -2.63
TOPBP1Q92547 AL121914.1-201ENST00000450188 156 ntBASIC-1.35□□□□□ -2.63
TOPBP1Q92547 AL500527.2-201ENST00000454105 95 ntBASIC-1.35□□□□□ -2.63
TOPBP1Q92547 MIR3115-201ENST00000577915 68 ntBASIC-1.35□□□□□ -2.63
TOPBP1Q92547 MIR5704-201ENST00000584029 77 ntBASIC-1.35□□□□□ -2.63
TOPBP1Q92547 U4.1-201ENST00000620349 87 ntBASIC-1.35□□□□□ -2.63
TOPBP1Q92547 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.36□□□□□ -2.63
TOPBP1Q92547 Y_RNA.601-201ENST00000410500 113 ntBASIC-1.36□□□□□ -2.63
TOPBP1Q92547 RNU6-121P-201ENST00000410525 99 ntBASIC-1.36□□□□□ -2.63
TOPBP1Q92547 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-1.36□□□□□ -2.63
TOPBP1Q92547 MIR8068-201ENST00000618032 68 ntBASIC-1.36□□□□□ -2.63
TOPBP1Q92547 SNORD116-2-201ENST00000384274 95 ntBASIC-1.37□□□□□ -2.63
TOPBP1Q92547 RNU6-476P-201ENST00000384726 107 ntBASIC-1.37□□□□□ -2.63
TOPBP1Q92547 SNORD77B-201ENST00000391112 67 ntBASIC-1.37□□□□□ -2.63
TOPBP1Q92547 RNU7-152P-201ENST00000458982 64 ntBASIC-1.37□□□□□ -2.63
TOPBP1Q92547 uc_338.19-201ENST00000616808 99 ntBASIC-1.37□□□□□ -2.63
TOPBP1Q92547 Y_RNA.360-201ENST00000365512 102 ntBASIC-1.38□□□□□ -2.63
TOPBP1Q92547 RNU6-472P-201ENST00000384299 107 ntBASIC-1.38□□□□□ -2.63
TOPBP1Q92547 RNU6-1215P-201ENST00000384441 102 ntBASIC-1.38□□□□□ -2.63
TOPBP1Q92547 SNORD64-201ENST00000386683 67 ntBASIC-1.38□□□□□ -2.63
TOPBP1Q92547 MIR216B-201ENST00000390186 82 ntBASIC-1.38□□□□□ -2.63
TOPBP1Q92547 RNU6-1307P-201ENST00000391012 103 ntBASIC-1.38□□□□□ -2.63
TOPBP1Q92547 RNU6-1254P-201ENST00000391266 104 ntBASIC-1.38□□□□□ -2.63
TOPBP1Q92547 IGHVII-40-1-201ENST00000517316 58 ntBASIC-1.38□□□□□ -2.63
TOPBP1Q92547 MIR4499-201ENST00000584834 69 ntBASIC-1.38□□□□□ -2.63
TOPBP1Q92547 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-1.38□□□□□ -2.63
TOPBP1Q92547 Y_RNA.117-201ENST00000363294 101 ntBASIC-1.39□□□□□ -2.63
TOPBP1Q92547 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.39□□□□□ -2.63
TOPBP1Q92547 MT-TL1-201ENST00000386347 75 ntBASIC-1.39□□□□□ -2.63
TOPBP1Q92547 RNU6-243P-201ENST00000391140 107 ntBASIC-1.39□□□□□ -2.63
TOPBP1Q92547 RNU6-976P-201ENST00000516086 111 ntBASIC-1.39□□□□□ -2.63
TOPBP1Q92547 Y_RNA.437-201ENST00000384113 113 ntBASIC-1.4□□□□□ -2.63
TOPBP1Q92547 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.4□□□□□ -2.63
TOPBP1Q92547 RNU6-381P-201ENST00000391259 108 ntBASIC-1.4□□□□□ -2.63
TOPBP1Q92547 RNU7-164P-201ENST00000459221 62 ntBASIC-1.4□□□□□ -2.63
TOPBP1Q92547 SNORD18.2-201ENST00000459604 70 ntBASIC-1.4□□□□□ -2.63
TOPBP1Q92547 SERF1AP1-201ENST00000514575 187 ntBASIC-1.4□□□□□ -2.63
TOPBP1Q92547 AC138907.4-201ENST00000570107 226 ntBASIC-1.4□□□□□ -2.63
TOPBP1Q92547 AC021443.1-201ENST00000604478 211 ntBASIC-1.4□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 208 ms