Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 MIR92A1-201ENST00000385233 78 ntBASIC0.54□□□□□ -2.32
RAB40AQ8WXH6 MIR548M-201ENST00000408260 86 ntBASIC0.54□□□□□ -2.32
RAB40AQ8WXH6 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.54□□□□□ -2.32
RAB40AQ8WXH6 RNU6-521P-201ENST00000516663 105 ntBASIC0.54□□□□□ -2.32
RAB40AQ8WXH6 MIR548H5-201ENST00000580314 60 ntBASIC0.54□□□□□ -2.32
RAB40AQ8WXH6 MIR376B-201ENST00000614515 100 ntBASIC0.54□□□□□ -2.32
RAB40AQ8WXH6 SNORD18A-201ENST00000363753 72 ntBASIC0.53□□□□□ -2.32
RAB40AQ8WXH6 SNORD71-201ENST00000411292 86 ntBASIC0.53□□□□□ -2.32
RAB40AQ8WXH6 RNU7-107P-201ENST00000459121 61 ntBASIC0.53□□□□□ -2.32
RAB40AQ8WXH6 RNU7-10P-201ENST00000607194 63 ntBASIC0.53□□□□□ -2.32
RAB40AQ8WXH6 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.53□□□□□ -2.32
RAB40AQ8WXH6 MIR1255B1-201ENST00000636325 63 ntBASIC0.53□□□□□ -2.32
RAB40AQ8WXH6 SNORA63.5-201ENST00000363548 123 ntBASIC0.52□□□□□ -2.33
RAB40AQ8WXH6 RNA5SP517-201ENST00000364724 117 ntBASIC0.52□□□□□ -2.33
RAB40AQ8WXH6 MIR598-201ENST00000384868 97 ntBASIC0.52□□□□□ -2.33
RAB40AQ8WXH6 uc_338.17-201ENST00000619633 179 ntBASIC0.52□□□□□ -2.33
RAB40AQ8WXH6 Y_RNA.630-201ENST00000411370 108 ntBASIC0.51□□□□□ -2.33
RAB40AQ8WXH6 AC138869.1-201ENST00000568623 124 ntBASIC0.51□□□□□ -2.33
RAB40AQ8WXH6 MIR6513-201ENST00000621188 64 ntBASIC0.51□□□□□ -2.33
RAB40AQ8WXH6 RNA5SP347-201ENST00000362445 119 ntBASIC0.5□□□□□ -2.33
RAB40AQ8WXH6 Y_RNA.218-201ENST00000364218 104 ntBASIC0.5□□□□□ -2.33
RAB40AQ8WXH6 RNA5SP245-201ENST00000364239 121 ntBASIC0.5□□□□□ -2.33
RAB40AQ8WXH6 RNU4-67P-201ENST00000364569 141 ntBASIC0.5□□□□□ -2.33
RAB40AQ8WXH6 SNORA8.2-201ENST00000384372 139 ntBASIC0.5□□□□□ -2.33
RAB40AQ8WXH6 MIR34C-201ENST00000384831 77 ntBASIC0.5□□□□□ -2.33
RAB40AQ8WXH6 SNORA40.8-201ENST00000411034 126 ntBASIC0.5□□□□□ -2.33
RAB40AQ8WXH6 RNA5SP436-201ENST00000516020 115 ntBASIC0.5□□□□□ -2.33
RAB40AQ8WXH6 MIR4639-201ENST00000584938 69 ntBASIC0.5□□□□□ -2.33
RAB40AQ8WXH6 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
RAB40AQ8WXH6 Y_RNA.344-201ENST00000365381 112 ntBASIC0.49□□□□□ -2.33
RAB40AQ8WXH6 Y_RNA.360-201ENST00000365512 102 ntBASIC0.49□□□□□ -2.33
RAB40AQ8WXH6 SNORD38.2-201ENST00000384470 69 ntBASIC0.49□□□□□ -2.33
RAB40AQ8WXH6 MIR635-201ENST00000384830 98 ntBASIC0.49□□□□□ -2.33
RAB40AQ8WXH6 SNORA7.5-201ENST00000410672 110 ntBASIC0.49□□□□□ -2.33
RAB40AQ8WXH6 BX276092.1-201ENST00000427368 251 ntBASIC0.49□□□□□ -2.33
RAB40AQ8WXH6 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
RAB40AQ8WXH6 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.48□□□□□ -2.33
RAB40AQ8WXH6 Y_RNA.71-201ENST00000362892 104 ntBASIC0.48□□□□□ -2.33
RAB40AQ8WXH6 Y_RNA.507-201ENST00000384500 99 ntBASIC0.48□□□□□ -2.33
RAB40AQ8WXH6 Y_RNA.525-201ENST00000384570 113 ntBASIC0.48□□□□□ -2.33
RAB40AQ8WXH6 SNORD28-201ENST00000384706 75 ntBASIC0.48□□□□□ -2.33
RAB40AQ8WXH6 MIR518A1-201ENST00000385068 85 ntBASIC0.48□□□□□ -2.33
RAB40AQ8WXH6 AC092628.1-201ENST00000436250 252 ntBASIC0.48□□□□□ -2.33
RAB40AQ8WXH6 SCARNA16.5-201ENST00000517114 183 ntBASIC0.48□□□□□ -2.33
RAB40AQ8WXH6 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.48□□□□□ -2.33
RAB40AQ8WXH6 SNORA25.18-201ENST00000607153 114 ntBASIC0.48□□□□□ -2.33
RAB40AQ8WXH6 MIR3914-2-201ENST00000637339 95 ntBASIC0.48□□□□□ -2.33
RAB40AQ8WXH6 RNU6-363P-201ENST00000362895 105 ntBASIC0.47□□□□□ -2.33
RAB40AQ8WXH6 SNORA36.1-201ENST00000363424 132 ntBASIC0.47□□□□□ -2.33
RAB40AQ8WXH6 Y_RNA.155-201ENST00000363632 101 ntBASIC0.47□□□□□ -2.33
RAB40AQ8WXH6 MIR548I2-201ENST00000408348 149 ntBASIC0.47□□□□□ -2.33
RAB40AQ8WXH6 SNORA68.3-201ENST00000515906 83 ntBASIC0.47□□□□□ -2.33
RAB40AQ8WXH6 RNA5SP268-201ENST00000516828 124 ntBASIC0.47□□□□□ -2.33
RAB40AQ8WXH6 Y_RNA.712-201ENST00000517011 92 ntBASIC0.47□□□□□ -2.33
RAB40AQ8WXH6 RNA5SP47-201ENST00000517230 109 ntBASIC0.47□□□□□ -2.33
RAB40AQ8WXH6 PVT1_3.1-201ENST00000620853 95 ntBASIC0.47□□□□□ -2.33
RAB40AQ8WXH6 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.47□□□□□ -2.33
RAB40AQ8WXH6 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.47□□□□□ -2.33
RAB40AQ8WXH6 AL512310.12-203ENST00000640543 90 ntBASIC0.47□□□□□ -2.33
RAB40AQ8WXH6 Y_RNA.49-201ENST00000362714 112 ntBASIC0.46□□□□□ -2.34
RAB40AQ8WXH6 Y_RNA.362-201ENST00000365518 110 ntBASIC0.46□□□□□ -2.34
RAB40AQ8WXH6 SNORD116-14-201ENST00000383894 92 ntBASIC0.46□□□□□ -2.34
RAB40AQ8WXH6 SNORD116-17-201ENST00000383929 92 ntBASIC0.46□□□□□ -2.34
RAB40AQ8WXH6 SNORD116-15-201ENST00000384445 92 ntBASIC0.46□□□□□ -2.34
RAB40AQ8WXH6 SNORD116-19-201ENST00000384729 92 ntBASIC0.46□□□□□ -2.34
RAB40AQ8WXH6 SUMO1P3-201ENST00000439961 304 ntBASIC0.46□□□□□ -2.34
RAB40AQ8WXH6 AC244505.6-201ENST00000452829 130 ntBASIC0.46□□□□□ -2.34
RAB40AQ8WXH6 RNA5SP227-201ENST00000516184 113 ntBASIC0.46□□□□□ -2.34
RAB40AQ8WXH6 RNU6-659P-201ENST00000516454 104 ntBASIC0.46□□□□□ -2.34
RAB40AQ8WXH6 AC244669.1-204ENST00000621564 178 ntBASIC0.46□□□□□ -2.34
RAB40AQ8WXH6 U6.95-201ENST00000636931 70 ntBASIC0.46□□□□□ -2.34
RAB40AQ8WXH6 SNORD115-24-201ENST00000363528 82 ntBASIC0.45□□□□□ -2.34
RAB40AQ8WXH6 SNORD118-201ENST00000363593 134 ntBASIC0.45□□□□□ -2.34
RAB40AQ8WXH6 RNU6-409P-201ENST00000384114 104 ntBASIC0.45□□□□□ -2.34
RAB40AQ8WXH6 RNU6-571P-201ENST00000384128 107 ntBASIC0.45□□□□□ -2.34
RAB40AQ8WXH6 MIR936-201ENST00000401264 98 ntBASIC0.45□□□□□ -2.34
RAB40AQ8WXH6 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.45□□□□□ -2.34
RAB40AQ8WXH6 TMSB4XP3-201ENST00000445144 114 ntBASIC0.45□□□□□ -2.34
RAB40AQ8WXH6 AL157398.1-201ENST00000452981 186 ntBASIC0.45□□□□□ -2.34
RAB40AQ8WXH6 Y_RNA.649-201ENST00000459077 103 ntBASIC0.45□□□□□ -2.34
RAB40AQ8WXH6 AC091304.10-201ENST00000641554 121 ntBASIC0.45□□□□□ -2.34
RAB40AQ8WXH6 RNU6-1313P-201ENST00000362622 102 ntBASIC0.44□□□□□ -2.34
RAB40AQ8WXH6 RNU6-170P-201ENST00000362832 104 ntBASIC0.44□□□□□ -2.34
RAB40AQ8WXH6 RNU6-816P-201ENST00000390914 107 ntBASIC0.44□□□□□ -2.34
RAB40AQ8WXH6 RNU6-1268P-201ENST00000391214 107 ntBASIC0.44□□□□□ -2.34
RAB40AQ8WXH6 RNU6-1239P-201ENST00000391310 107 ntBASIC0.44□□□□□ -2.34
RAB40AQ8WXH6 MIR1912-201ENST00000410389 80 ntBASIC0.44□□□□□ -2.34
RAB40AQ8WXH6 SNRPGP12-201ENST00000449481 213 ntBASIC0.44□□□□□ -2.34
RAB40AQ8WXH6 TRAJ51-201ENST00000504127 63 ntBASIC0.44□□□□□ -2.34
RAB40AQ8WXH6 MTND5P40-201ENST00000559945 246 ntBASIC0.44□□□□□ -2.34
RAB40AQ8WXH6 MIR6828-201ENST00000636181 60 ntBASIC0.44□□□□□ -2.34
RAB40AQ8WXH6 AL162726.3-218ENST00000636401 95 ntBASIC0.44□□□□□ -2.34
RAB40AQ8WXH6 Y_RNA.85-201ENST00000363014 111 ntBASIC0.43□□□□□ -2.34
RAB40AQ8WXH6 AC098934.3-201ENST00000430450 190 ntBASIC0.43□□□□□ -2.34
RAB40AQ8WXH6 AC097635.1-201ENST00000450678 155 ntBASIC0.43□□□□□ -2.34
RAB40AQ8WXH6 RPL39P34-201ENST00000477141 156 ntBASIC0.43□□□□□ -2.34
RAB40AQ8WXH6 SNORD33.1-201ENST00000516213 88 ntBASIC0.43□□□□□ -2.34
RAB40AQ8WXH6 RNU6-1018P-201ENST00000516577 106 ntBASIC0.43□□□□□ -2.34
RAB40AQ8WXH6 MIRLET7D-201ENST00000362263 87 ntBASIC0.42□□□□□ -2.34
RAB40AQ8WXH6 RNA5SP499-201ENST00000363982 119 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 236 ms