Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 RNU6-535P-201ENST00000384722 107 ntBASIC0.68□□□□□ -2.3
HMGB4Q8WW32 TMSB4XP3-201ENST00000445144 114 ntBASIC0.68□□□□□ -2.3
HMGB4Q8WW32 SNORA31.14-201ENST00000516728 116 ntBASIC0.68□□□□□ -2.3
HMGB4Q8WW32 AP001362.1-201ENST00000625165 124 ntBASIC0.68□□□□□ -2.3
HMGB4Q8WW32 MIR1255B1-201ENST00000636325 63 ntBASIC0.68□□□□□ -2.3
HMGB4Q8WW32 Y_RNA.32-201ENST00000362589 110 ntBASIC0.67□□□□□ -2.3
HMGB4Q8WW32 Y_RNA.127-201ENST00000363386 109 ntBASIC0.67□□□□□ -2.3
HMGB4Q8WW32 RNU6-865P-201ENST00000364772 107 ntBASIC0.67□□□□□ -2.3
HMGB4Q8WW32 RNU6-81P-201ENST00000365608 104 ntBASIC0.67□□□□□ -2.3
HMGB4Q8WW32 SNORD116-14-201ENST00000383894 92 ntBASIC0.67□□□□□ -2.3
HMGB4Q8WW32 SNORD116-17-201ENST00000383929 92 ntBASIC0.67□□□□□ -2.3
HMGB4Q8WW32 SNORD116-15-201ENST00000384445 92 ntBASIC0.67□□□□□ -2.3
HMGB4Q8WW32 SNORD116-19-201ENST00000384729 92 ntBASIC0.67□□□□□ -2.3
HMGB4Q8WW32 MIR3678-201ENST00000578455 94 ntBASIC0.67□□□□□ -2.3
HMGB4Q8WW32 MIR376B-201ENST00000614515 100 ntBASIC0.67□□□□□ -2.3
HMGB4Q8WW32 RNA5SP347-201ENST00000362445 119 ntBASIC0.66□□□□□ -2.3
HMGB4Q8WW32 SNORD114-23-201ENST00000363536 72 ntBASIC0.66□□□□□ -2.3
HMGB4Q8WW32 Y_RNA.344-201ENST00000365381 112 ntBASIC0.66□□□□□ -2.3
HMGB4Q8WW32 RNU6-959P-201ENST00000384671 107 ntBASIC0.66□□□□□ -2.3
HMGB4Q8WW32 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.66□□□□□ -2.3
HMGB4Q8WW32 RNU6-521P-201ENST00000516663 105 ntBASIC0.66□□□□□ -2.3
HMGB4Q8WW32 MIR101-2-201ENST00000362195 79 ntBASIC0.65□□□□□ -2.31
HMGB4Q8WW32 MIR644A-201ENST00000385262 94 ntBASIC0.65□□□□□ -2.31
HMGB4Q8WW32 AL603908.1-201ENST00000406098 201 ntBASIC0.65□□□□□ -2.31
HMGB4Q8WW32 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.65□□□□□ -2.31
HMGB4Q8WW32 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.65□□□□□ -2.31
HMGB4Q8WW32 MIR1273G-201ENST00000577677 100 ntBASIC0.65□□□□□ -2.31
HMGB4Q8WW32 Y_RNA.56-201ENST00000362798 112 ntBASIC0.64□□□□□ -2.31
HMGB4Q8WW32 RNU6-363P-201ENST00000362895 105 ntBASIC0.64□□□□□ -2.31
HMGB4Q8WW32 RNU4-67P-201ENST00000364569 141 ntBASIC0.64□□□□□ -2.31
HMGB4Q8WW32 MIR4500-201ENST00000579472 76 ntBASIC0.64□□□□□ -2.31
HMGB4Q8WW32 U6.95-201ENST00000636931 70 ntBASIC0.64□□□□□ -2.31
HMGB4Q8WW32 Y_RNA.362-201ENST00000365518 110 ntBASIC0.63□□□□□ -2.31
HMGB4Q8WW32 MIR34C-201ENST00000384831 77 ntBASIC0.63□□□□□ -2.31
HMGB4Q8WW32 RNU6-679P-201ENST00000391003 106 ntBASIC0.63□□□□□ -2.31
HMGB4Q8WW32 RNU6-469P-201ENST00000516253 101 ntBASIC0.63□□□□□ -2.31
HMGB4Q8WW32 RNA5SP94-201ENST00000516917 108 ntBASIC0.63□□□□□ -2.31
HMGB4Q8WW32 AC018659.1-201ENST00000551083 169 ntBASIC0.63□□□□□ -2.31
HMGB4Q8WW32 MIR4711-201ENST00000578274 70 ntBASIC0.63□□□□□ -2.31
HMGB4Q8WW32 SNORD18A-201ENST00000363753 72 ntBASIC0.62□□□□□ -2.31
HMGB4Q8WW32 RNA5SP245-201ENST00000364239 121 ntBASIC0.62□□□□□ -2.31
HMGB4Q8WW32 Y_RNA.360-201ENST00000365512 102 ntBASIC0.62□□□□□ -2.31
HMGB4Q8WW32 RNU6-945P-201ENST00000383947 107 ntBASIC0.62□□□□□ -2.31
HMGB4Q8WW32 RNA5SP193-201ENST00000410353 107 ntBASIC0.62□□□□□ -2.31
HMGB4Q8WW32 AC098934.3-201ENST00000430450 190 ntBASIC0.62□□□□□ -2.31
HMGB4Q8WW32 SNORD33.1-201ENST00000516213 88 ntBASIC0.62□□□□□ -2.31
HMGB4Q8WW32 RNU6-135P-201ENST00000516769 101 ntBASIC0.62□□□□□ -2.31
HMGB4Q8WW32 AC243829.3-201ENST00000622177 108 ntBASIC0.62□□□□□ -2.31
HMGB4Q8WW32 SNORA63.5-201ENST00000363548 123 ntBASIC0.61□□□□□ -2.31
HMGB4Q8WW32 SNORA7.5-201ENST00000410672 110 ntBASIC0.61□□□□□ -2.31
HMGB4Q8WW32 Y_RNA.649-201ENST00000459077 103 ntBASIC0.61□□□□□ -2.31
HMGB4Q8WW32 RNU6-1333P-201ENST00000516162 93 ntBASIC0.61□□□□□ -2.31
HMGB4Q8WW32 RNU6-229P-201ENST00000516614 102 ntBASIC0.61□□□□□ -2.31
HMGB4Q8WW32 MIR4679-2-201ENST00000578358 77 ntBASIC0.61□□□□□ -2.31
HMGB4Q8WW32 MIR548H5-201ENST00000580314 60 ntBASIC0.61□□□□□ -2.31
HMGB4Q8WW32 MIR3910-1-201ENST00000580936 111 ntBASIC0.61□□□□□ -2.31
HMGB4Q8WW32 AC010487.4-201ENST00000637027 61 ntBASIC0.61□□□□□ -2.31
HMGB4Q8WW32 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
HMGB4Q8WW32 RPL39P34-201ENST00000477141 156 ntBASIC0.6□□□□□ -2.31
HMGB4Q8WW32 RNU4-54P-201ENST00000516428 129 ntBASIC0.6□□□□□ -2.31
HMGB4Q8WW32 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.6□□□□□ -2.31
HMGB4Q8WW32 RNA5SP517-201ENST00000364724 117 ntBASIC0.59□□□□□ -2.31
HMGB4Q8WW32 Y_RNA.507-201ENST00000384500 99 ntBASIC0.59□□□□□ -2.31
HMGB4Q8WW32 Y_RNA.563-201ENST00000384707 108 ntBASIC0.59□□□□□ -2.31
HMGB4Q8WW32 BX276092.1-201ENST00000427368 251 ntBASIC0.59□□□□□ -2.31
HMGB4Q8WW32 AL353813.1-201ENST00000440700 253 ntBASIC0.59□□□□□ -2.31
HMGB4Q8WW32 AC008267.6-201ENST00000441664 139 ntBASIC0.59□□□□□ -2.31
HMGB4Q8WW32 AC007012.1-201ENST00000567192 175 ntBASIC0.59□□□□□ -2.31
HMGB4Q8WW32 RNU7-10P-201ENST00000607194 63 ntBASIC0.59□□□□□ -2.31
HMGB4Q8WW32 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.59□□□□□ -2.31
HMGB4Q8WW32 AC092634.7-201ENST00000621022 103 ntBASIC0.59□□□□□ -2.31
HMGB4Q8WW32 AL162726.3-218ENST00000636401 95 ntBASIC0.59□□□□□ -2.31
HMGB4Q8WW32 RNU6-1313P-201ENST00000362622 102 ntBASIC0.58□□□□□ -2.32
HMGB4Q8WW32 Y_RNA.85-201ENST00000363014 111 ntBASIC0.58□□□□□ -2.32
HMGB4Q8WW32 RNA5SP499-201ENST00000363982 119 ntBASIC0.58□□□□□ -2.32
HMGB4Q8WW32 Y_RNA.353-201ENST00000365440 108 ntBASIC0.58□□□□□ -2.32
HMGB4Q8WW32 RNU6-409P-201ENST00000384114 104 ntBASIC0.58□□□□□ -2.32
HMGB4Q8WW32 Y_RNA.567-201ENST00000384736 106 ntBASIC0.58□□□□□ -2.32
HMGB4Q8WW32 RNU6-816P-201ENST00000390914 107 ntBASIC0.58□□□□□ -2.32
HMGB4Q8WW32 RNU6-1268P-201ENST00000391214 107 ntBASIC0.58□□□□□ -2.32
HMGB4Q8WW32 RNU6-1239P-201ENST00000391310 107 ntBASIC0.58□□□□□ -2.32
HMGB4Q8WW32 MIR548I2-201ENST00000408348 149 ntBASIC0.58□□□□□ -2.32
HMGB4Q8WW32 AC092628.1-201ENST00000436250 252 ntBASIC0.58□□□□□ -2.32
HMGB4Q8WW32 RN7SKP12-201ENST00000516275 143 ntBASIC0.58□□□□□ -2.32
HMGB4Q8WW32 RNA5SP121-201ENST00000516537 101 ntBASIC0.58□□□□□ -2.32
HMGB4Q8WW32 RNU6-1018P-201ENST00000516577 106 ntBASIC0.58□□□□□ -2.32
HMGB4Q8WW32 AC138869.1-201ENST00000568623 124 ntBASIC0.58□□□□□ -2.32
HMGB4Q8WW32 MIR4639-201ENST00000584938 69 ntBASIC0.58□□□□□ -2.32
HMGB4Q8WW32 AL035470.1-201ENST00000622571 220 ntBASIC0.58□□□□□ -2.32
HMGB4Q8WW32 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.58□□□□□ -2.32
HMGB4Q8WW32 MIR5087-201ENST00000635826 76 ntBASIC0.58□□□□□ -2.32
HMGB4Q8WW32 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.58□□□□□ -2.32
HMGB4Q8WW32 Y_RNA.155-201ENST00000363632 101 ntBASIC0.57□□□□□ -2.32
HMGB4Q8WW32 SNORD28-201ENST00000384706 75 ntBASIC0.57□□□□□ -2.32
HMGB4Q8WW32 MIR635-201ENST00000384830 98 ntBASIC0.57□□□□□ -2.32
HMGB4Q8WW32 MIR548A1-201ENST00000385041 97 ntBASIC0.57□□□□□ -2.32
HMGB4Q8WW32 MIR548A3-201ENST00000385297 97 ntBASIC0.57□□□□□ -2.32
HMGB4Q8WW32 MIR1912-201ENST00000410389 80 ntBASIC0.57□□□□□ -2.32
HMGB4Q8WW32 SNRPGP12-201ENST00000449481 213 ntBASIC0.57□□□□□ -2.32
HMGB4Q8WW32 AC244505.6-201ENST00000452829 130 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 199 ms