Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 FO624990.1-201ENST00000636373 85 ntBASIC2.73□□□□□ -1.97
PTCD2Q8WV60 AL359851.1-201ENST00000569460 4997 ntBASIC2.73□□□□□ -1.97
PTCD2Q8WV60 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
PTCD2Q8WV60 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
PTCD2Q8WV60 RNU6-668P-201ENST00000364180 107 ntBASIC2.72□□□□□ -1.97
PTCD2Q8WV60 SNORA16B-201ENST00000364674 135 ntBASIC2.72□□□□□ -1.97
PTCD2Q8WV60 RNU6-934P-201ENST00000365154 107 ntBASIC2.72□□□□□ -1.97
PTCD2Q8WV60 SNORA6-201ENST00000384033 151 ntBASIC2.72□□□□□ -1.97
PTCD2Q8WV60 MIR9-1-201ENST00000385198 89 ntBASIC2.72□□□□□ -1.97
PTCD2Q8WV60 RNU6ATAC33P-201ENST00000408647 126 ntBASIC2.72□□□□□ -1.97
PTCD2Q8WV60 SNORD109B-201ENST00000458961 67 ntBASIC2.72□□□□□ -1.97
PTCD2Q8WV60 SNORD109A-201ENST00000459128 67 ntBASIC2.72□□□□□ -1.97
PTCD2Q8WV60 SNORA31.11-201ENST00000516528 139 ntBASIC2.72□□□□□ -1.97
PTCD2Q8WV60 MIR4435-1-201ENST00000582552 80 ntBASIC2.72□□□□□ -1.97
PTCD2Q8WV60 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.72□□□□□ -1.97
PTCD2Q8WV60 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.72□□□□□ -1.97
PTCD2Q8WV60 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
PTCD2Q8WV60 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
PTCD2Q8WV60 U8.2-201ENST00000363156 134 ntBASIC2.71□□□□□ -1.98
PTCD2Q8WV60 RNU6-982P-201ENST00000516216 102 ntBASIC2.71□□□□□ -1.98
PTCD2Q8WV60 RNU6-287P-201ENST00000516230 98 ntBASIC2.71□□□□□ -1.98
PTCD2Q8WV60 RNU6-977P-201ENST00000516411 103 ntBASIC2.71□□□□□ -1.98
PTCD2Q8WV60 RNU6-535P-201ENST00000384722 107 ntBASIC2.7□□□□□ -1.98
PTCD2Q8WV60 MIR125B2-201ENST00000385128 89 ntBASIC2.7□□□□□ -1.98
PTCD2Q8WV60 MIR3945-201ENST00000581853 98 ntBASIC2.7□□□□□ -1.98
PTCD2Q8WV60 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
PTCD2Q8WV60 RNA5SP276-201ENST00000362580 94 ntBASIC2.69□□□□□ -1.98
PTCD2Q8WV60 Y_RNA.258-201ENST00000364613 105 ntBASIC2.69□□□□□ -1.98
PTCD2Q8WV60 SNORD115-44-201ENST00000365391 82 ntBASIC2.68□□□□□ -1.98
PTCD2Q8WV60 RNU1-52P-201ENST00000384190 164 ntBASIC2.68□□□□□ -1.98
PTCD2Q8WV60 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
PTCD2Q8WV60 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
PTCD2Q8WV60 RNA5SP184-201ENST00000411071 108 ntBASIC2.68□□□□□ -1.98
PTCD2Q8WV60 IGLVVI-22-1-201ENST00000521183 211 ntBASIC2.68□□□□□ -1.98
PTCD2Q8WV60 MIR4635-201ENST00000583759 79 ntBASIC2.68□□□□□ -1.98
PTCD2Q8WV60 AL049779.4-201ENST00000604500 156 ntBASIC2.68□□□□□ -1.98
PTCD2Q8WV60 MIR6715A-201ENST00000615929 79 ntBASIC2.68□□□□□ -1.98
PTCD2Q8WV60 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.68□□□□□ -1.98
PTCD2Q8WV60 RNU6-542P-201ENST00000516405 103 ntBASIC2.67□□□□□ -1.98
PTCD2Q8WV60 MIR4771-2-201ENST00000577758 74 ntBASIC2.67□□□□□ -1.98
PTCD2Q8WV60 SNORA77B-201ENST00000578179 125 ntBASIC2.67□□□□□ -1.98
PTCD2Q8WV60 MIR3664-201ENST00000579074 99 ntBASIC2.67□□□□□ -1.98
PTCD2Q8WV60 MIR4771-1-201ENST00000582617 74 ntBASIC2.67□□□□□ -1.98
PTCD2Q8WV60 MIR5092-201ENST00000583139 88 ntBASIC2.67□□□□□ -1.98
PTCD2Q8WV60 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
PTCD2Q8WV60 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
PTCD2Q8WV60 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
PTCD2Q8WV60 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
PTCD2Q8WV60 MAPK10-266ENST00000641066 6555 ntBASIC2.66□□□□□ -1.98
PTCD2Q8WV60 MIR449A-201ENST00000362113 91 ntBASIC2.66□□□□□ -1.98
PTCD2Q8WV60 RNA5SP282-201ENST00000516355 108 ntBASIC2.66□□□□□ -1.98
PTCD2Q8WV60 MIR4446-201ENST00000578505 67 ntBASIC2.66□□□□□ -1.98
PTCD2Q8WV60 AC103810.8-201ENST00000607347 118 ntBASIC2.66□□□□□ -1.98
PTCD2Q8WV60 MIR8063-201ENST00000621930 81 ntBASIC2.66□□□□□ -1.98
PTCD2Q8WV60 RNA5SP245-201ENST00000364239 121 ntBASIC2.65□□□□□ -1.99
PTCD2Q8WV60 SNORD113.3-201ENST00000364630 78 ntBASIC2.65□□□□□ -1.99
PTCD2Q8WV60 Y_RNA.330-201ENST00000365230 109 ntBASIC2.65□□□□□ -1.99
PTCD2Q8WV60 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.65□□□□□ -1.99
PTCD2Q8WV60 MIR8074-201ENST00000615081 81 ntBASIC2.65□□□□□ -1.99
PTCD2Q8WV60 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.65□□□□□ -1.99
PTCD2Q8WV60 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
PTCD2Q8WV60 SNORA67.3-201ENST00000384366 140 ntBASIC2.64□□□□□ -1.99
PTCD2Q8WV60 RNU6-364P-201ENST00000384387 107 ntBASIC2.64□□□□□ -1.99
PTCD2Q8WV60 SNORD75.2-201ENST00000408784 58 ntBASIC2.64□□□□□ -1.99
PTCD2Q8WV60 AC092634.7-201ENST00000621022 103 ntBASIC2.64□□□□□ -1.99
PTCD2Q8WV60 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.64□□□□□ -1.99
PTCD2Q8WV60 Z82195.2-201ENST00000612348 18351 ntBASIC2.64□□□□□ -1.99
PTCD2Q8WV60 RNU6-859P-201ENST00000362728 107 ntBASIC2.63□□□□□ -1.99
PTCD2Q8WV60 RNU6-829P-201ENST00000363700 112 ntBASIC2.63□□□□□ -1.99
PTCD2Q8WV60 SUMO1P4-201ENST00000429430 302 ntBASIC2.63□□□□□ -1.99
PTCD2Q8WV60 AC008608.1-201ENST00000603910 127 ntBASIC2.63□□□□□ -1.99
PTCD2Q8WV60 AL645939.4-201ENST00000604495 135 ntBASIC2.63□□□□□ -1.99
PTCD2Q8WV60 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.62□□□□□ -1.99
PTCD2Q8WV60 RNU6-1079P-201ENST00000362861 110 ntBASIC2.62□□□□□ -1.99
PTCD2Q8WV60 Y_RNA.236-201ENST00000364427 111 ntBASIC2.62□□□□□ -1.99
PTCD2Q8WV60 RNU6-1335P-201ENST00000365426 107 ntBASIC2.62□□□□□ -1.99
PTCD2Q8WV60 AC055731.1-201ENST00000474387 401 ntBASIC2.62□□□□□ -1.99
PTCD2Q8WV60 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.62□□□□□ -1.99
PTCD2Q8WV60 RNU7-13P-201ENST00000516413 62 ntBASIC2.62□□□□□ -1.99
PTCD2Q8WV60 MIR6509-201ENST00000614603 85 ntBASIC2.62□□□□□ -1.99
PTCD2Q8WV60 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.61□□□□□ -1.99
PTCD2Q8WV60 RNA5SP393-201ENST00000363423 117 ntBASIC2.61□□□□□ -1.99
PTCD2Q8WV60 RNU6-1039P-201ENST00000383931 107 ntBASIC2.61□□□□□ -1.99
PTCD2Q8WV60 MIR196B-201ENST00000384852 84 ntBASIC2.61□□□□□ -1.99
PTCD2Q8WV60 MIR466-201ENST00000580653 84 ntBASIC2.61□□□□□ -1.99
PTCD2Q8WV60 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
PTCD2Q8WV60 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
PTCD2Q8WV60 DEFA7P-201ENST00000382676 285 ntBASIC2.6□□□□□ -1.99
PTCD2Q8WV60 MIR216B-201ENST00000390186 82 ntBASIC2.6□□□□□ -1.99
PTCD2Q8WV60 RNA5SP210-201ENST00000391034 120 ntBASIC2.6□□□□□ -1.99
PTCD2Q8WV60 AC244505.6-201ENST00000452829 130 ntBASIC2.6□□□□□ -1.99
PTCD2Q8WV60 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.6□□□□□ -1.99
PTCD2Q8WV60 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
PTCD2Q8WV60 MIR6073-201ENST00000352083 89 ntBASIC2.59□□□□□ -1.99
PTCD2Q8WV60 RNU6-940P-201ENST00000363433 104 ntBASIC2.59□□□□□ -1.99
PTCD2Q8WV60 SNORA25.5-201ENST00000363782 126 ntBASIC2.59□□□□□ -1.99
PTCD2Q8WV60 Y_RNA.375-201ENST00000365625 101 ntBASIC2.59□□□□□ -1.99
PTCD2Q8WV60 RNU7-24P-201ENST00000458867 62 ntBASIC2.59□□□□□ -1.99
PTCD2Q8WV60 RNA5SP148-201ENST00000516527 94 ntBASIC2.59□□□□□ -1.99
PTCD2Q8WV60 RNA5SP402-201ENST00000517148 110 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 193 ms