Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 JTBP1-201ENST00000441314 247 ntBASIC3.36□□□□□ -1.87
TRIM41Q8WV44 MIR2115-201ENST00000516657 100 ntBASIC3.36□□□□□ -1.87
TRIM41Q8WV44 Y_RNA.283-201ENST00000364798 112 ntBASIC3.35□□□□□ -1.87
TRIM41Q8WV44 RNA5SP160-201ENST00000364866 120 ntBASIC3.35□□□□□ -1.87
TRIM41Q8WV44 SNORA6-201ENST00000384033 151 ntBASIC3.35□□□□□ -1.87
TRIM41Q8WV44 MIR635-201ENST00000384830 98 ntBASIC3.35□□□□□ -1.87
TRIM41Q8WV44 SUMO1P4-201ENST00000429430 302 ntBASIC3.35□□□□□ -1.87
TRIM41Q8WV44 AC098934.3-201ENST00000430450 190 ntBASIC3.35□□□□□ -1.87
TRIM41Q8WV44 AC104996.3-201ENST00000590718 94 ntBASIC3.35□□□□□ -1.87
TRIM41Q8WV44 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
TRIM41Q8WV44 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
TRIM41Q8WV44 RNU6-132P-201ENST00000383863 107 ntBASIC3.34□□□□□ -1.87
TRIM41Q8WV44 RNU1-52P-201ENST00000384190 164 ntBASIC3.34□□□□□ -1.87
TRIM41Q8WV44 SNORA67.5-201ENST00000391036 107 ntBASIC3.34□□□□□ -1.87
TRIM41Q8WV44 SNORA25.16-201ENST00000516741 121 ntBASIC3.34□□□□□ -1.87
TRIM41Q8WV44 MIR5194-201ENST00000582634 120 ntBASIC3.34□□□□□ -1.87
TRIM41Q8WV44 uc_338.6-201ENST00000613544 171 ntBASIC3.34□□□□□ -1.87
TRIM41Q8WV44 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
TRIM41Q8WV44 RNU6-411P-201ENST00000384451 107 ntBASIC3.33□□□□□ -1.88
TRIM41Q8WV44 MIR548U-201ENST00000390728 81 ntBASIC3.33□□□□□ -1.88
TRIM41Q8WV44 SNORD93-201ENST00000408813 74 ntBASIC3.33□□□□□ -1.88
TRIM41Q8WV44 Y_RNA.660-201ENST00000516002 120 ntBASIC3.33□□□□□ -1.88
TRIM41Q8WV44 MIR3064-201ENST00000581130 66 ntBASIC3.33□□□□□ -1.88
TRIM41Q8WV44 AP000553.5-201ENST00000641933 54 ntBASIC3.33□□□□□ -1.88
TRIM41Q8WV44 MIRLET7F1-201ENST00000362202 87 ntBASIC3.32□□□□□ -1.88
TRIM41Q8WV44 Y_RNA.491-201ENST00000384417 107 ntBASIC3.32□□□□□ -1.88
TRIM41Q8WV44 AL161935.2-201ENST00000414627 60 ntBASIC3.32□□□□□ -1.88
TRIM41Q8WV44 RN7SL274P-201ENST00000492268 272 ntBASIC3.32□□□□□ -1.88
TRIM41Q8WV44 RNU6-523P-201ENST00000516304 54 ntBASIC3.32□□□□□ -1.88
TRIM41Q8WV44 MIR96-201ENST00000362288 78 ntBASIC3.31□□□□□ -1.88
TRIM41Q8WV44 RNU6-403P-201ENST00000363163 104 ntBASIC3.31□□□□□ -1.88
TRIM41Q8WV44 SNORD77.2-201ENST00000391045 68 ntBASIC3.31□□□□□ -1.88
TRIM41Q8WV44 AC015818.7-201ENST00000428754 109 ntBASIC3.31□□□□□ -1.88
TRIM41Q8WV44 RNU7-106P-201ENST00000459514 67 ntBASIC3.31□□□□□ -1.88
TRIM41Q8WV44 RNA5SP436-201ENST00000516020 115 ntBASIC3.31□□□□□ -1.88
TRIM41Q8WV44 RNU6-1223P-201ENST00000517124 104 ntBASIC3.31□□□□□ -1.88
TRIM41Q8WV44 MIR4446-201ENST00000578505 67 ntBASIC3.31□□□□□ -1.88
TRIM41Q8WV44 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC3.31□□□□□ -1.88
TRIM41Q8WV44 RNU4-58P-201ENST00000363192 141 ntBASIC3.3□□□□□ -1.88
TRIM41Q8WV44 MT-TF-201ENST00000387314 71 ntBASIC3.3□□□□□ -1.88
TRIM41Q8WV44 RNA5SP95-201ENST00000410319 137 ntBASIC3.3□□□□□ -1.88
TRIM41Q8WV44 RNU6-807P-201ENST00000516805 107 ntBASIC3.3□□□□□ -1.88
TRIM41Q8WV44 SNORD92-201ENST00000585078 85 ntBASIC3.3□□□□□ -1.88
TRIM41Q8WV44 GHRLOS.1-201ENST00000610995 70 ntBASIC3.3□□□□□ -1.88
TRIM41Q8WV44 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TRIM41Q8WV44 AC025033.1-201ENST00000463883 194 ntBASIC3.29□□□□□ -1.88
TRIM41Q8WV44 AC079804.2-201ENST00000490376 200 ntBASIC3.29□□□□□ -1.88
TRIM41Q8WV44 RNU6-75P-201ENST00000515944 104 ntBASIC3.29□□□□□ -1.88
TRIM41Q8WV44 RNU2-19P-201ENST00000517288 84 ntBASIC3.29□□□□□ -1.88
TRIM41Q8WV44 AC121758.2-201ENST00000553271 193 ntBASIC3.29□□□□□ -1.88
TRIM41Q8WV44 MIR4491-201ENST00000581087 68 ntBASIC3.29□□□□□ -1.88
TRIM41Q8WV44 MIR6516-201ENST00000630554 81 ntBASIC3.29□□□□□ -1.88
TRIM41Q8WV44 RNA5SP393-201ENST00000363423 117 ntBASIC3.28□□□□□ -1.88
TRIM41Q8WV44 RNU6-957P-201ENST00000363652 99 ntBASIC3.28□□□□□ -1.88
TRIM41Q8WV44 SNORD63B-201ENST00000411005 70 ntBASIC3.28□□□□□ -1.88
TRIM41Q8WV44 RNU6-871P-201ENST00000516122 100 ntBASIC3.28□□□□□ -1.88
TRIM41Q8WV44 RNU6-70P-201ENST00000516438 60 ntBASIC3.28□□□□□ -1.88
TRIM41Q8WV44 RNU6-448P-201ENST00000517052 107 ntBASIC3.28□□□□□ -1.88
TRIM41Q8WV44 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
TRIM41Q8WV44 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
TRIM41Q8WV44 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC3.27□□□□□ -1.89
TRIM41Q8WV44 RNU6-208P-201ENST00000362431 107 ntBASIC3.27□□□□□ -1.89
TRIM41Q8WV44 RNU6-590P-201ENST00000365039 107 ntBASIC3.27□□□□□ -1.89
TRIM41Q8WV44 RPL30P7-201ENST00000479312 323 ntBASIC3.27□□□□□ -1.89
TRIM41Q8WV44 AC084768.2-201ENST00000622736 221 ntBASIC3.27□□□□□ -1.89
TRIM41Q8WV44 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
TRIM41Q8WV44 MIR103A2-201ENST00000362154 78 ntBASIC3.26□□□□□ -1.89
TRIM41Q8WV44 MT-TN-201ENST00000387400 73 ntBASIC3.26□□□□□ -1.89
TRIM41Q8WV44 RNA5SP338-201ENST00000410495 85 ntBASIC3.26□□□□□ -1.89
TRIM41Q8WV44 RN7SL793P-201ENST00000583259 296 ntBASIC3.26□□□□□ -1.89
TRIM41Q8WV44 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
TRIM41Q8WV44 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
TRIM41Q8WV44 MIR101-2-201ENST00000362195 79 ntBASIC3.25□□□□□ -1.89
TRIM41Q8WV44 RNU6-654P-201ENST00000364373 107 ntBASIC3.25□□□□□ -1.89
TRIM41Q8WV44 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
TRIM41Q8WV44 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC3.25□□□□□ -1.89
TRIM41Q8WV44 Y_RNA.532-201ENST00000384590 113 ntBASIC3.24□□□□□ -1.89
TRIM41Q8WV44 snoU13.25-201ENST00000458945 104 ntBASIC3.24□□□□□ -1.89
TRIM41Q8WV44 RPS29P1-201ENST00000465274 159 ntBASIC3.24□□□□□ -1.89
TRIM41Q8WV44 AC055731.1-201ENST00000474387 401 ntBASIC3.24□□□□□ -1.89
TRIM41Q8WV44 RNU6-1015P-201ENST00000517121 99 ntBASIC3.24□□□□□ -1.89
TRIM41Q8WV44 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC3.23□□□□□ -1.89
TRIM41Q8WV44 RNU6-717P-201ENST00000459076 104 ntBASIC3.23□□□□□ -1.89
TRIM41Q8WV44 AC245884.12-201ENST00000615364 59 ntBASIC3.23□□□□□ -1.89
TRIM41Q8WV44 MIR8063-201ENST00000621930 81 ntBASIC3.23□□□□□ -1.89
TRIM41Q8WV44 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TRIM41Q8WV44 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TRIM41Q8WV44 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
TRIM41Q8WV44 RNA5SP212-201ENST00000391223 107 ntBASIC3.22□□□□□ -1.89
TRIM41Q8WV44 RNA5SP82-201ENST00000516707 92 ntBASIC3.22□□□□□ -1.89
TRIM41Q8WV44 Y_RNA.264-201ENST00000364665 102 ntBASIC3.21□□□□□ -1.9
TRIM41Q8WV44 SNORD90-201ENST00000391145 111 ntBASIC3.21□□□□□ -1.9
TRIM41Q8WV44 VPS35-212ENST00000640313 141 ntTSL 5 BASIC3.21□□□□□ -1.9
TRIM41Q8WV44 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
TRIM41Q8WV44 RNU1-36P-201ENST00000365130 165 ntBASIC3.2□□□□□ -1.9
TRIM41Q8WV44 Y_RNA.588-201ENST00000391254 102 ntBASIC3.2□□□□□ -1.9
TRIM41Q8WV44 MIR1185-1-201ENST00000408598 86 ntBASIC3.2□□□□□ -1.9
TRIM41Q8WV44 AL133373.1-201ENST00000497098 94 ntBASIC3.2□□□□□ -1.9
TRIM41Q8WV44 RNU6-539P-201ENST00000516665 103 ntBASIC3.2□□□□□ -1.9
TRIM41Q8WV44 RNU1-40P-201ENST00000516816 164 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 210.6 ms