Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 RNU6-228P-201ENST00000362700 106 ntBASIC1.43□□□□□ -2.18
SIMC1Q8NDZ2 Y_RNA.168-201ENST00000363740 102 ntBASIC1.43□□□□□ -2.18
SIMC1Q8NDZ2 RNU6-979P-201ENST00000383896 107 ntBASIC1.43□□□□□ -2.18
SIMC1Q8NDZ2 RNU6-242P-201ENST00000384359 107 ntBASIC1.43□□□□□ -2.18
SIMC1Q8NDZ2 SNORA2B-201ENST00000384583 137 ntBASIC1.43□□□□□ -2.18
SIMC1Q8NDZ2 MIR181B2-201ENST00000385004 89 ntBASIC1.43□□□□□ -2.18
SIMC1Q8NDZ2 RNU6-1165P-201ENST00000410119 107 ntBASIC1.43□□□□□ -2.18
SIMC1Q8NDZ2 Y_RNA.609-201ENST00000410669 89 ntBASIC1.43□□□□□ -2.18
SIMC1Q8NDZ2 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.43□□□□□ -2.18
SIMC1Q8NDZ2 AC138749.4-201ENST00000563970 127 ntBASIC1.43□□□□□ -2.18
SIMC1Q8NDZ2 MIR5588-201ENST00000581890 63 ntBASIC1.43□□□□□ -2.18
SIMC1Q8NDZ2 uc_338.6-201ENST00000613544 171 ntBASIC1.43□□□□□ -2.18
SIMC1Q8NDZ2 RNU6-1124P-201ENST00000384169 107 ntBASIC1.42□□□□□ -2.18
SIMC1Q8NDZ2 RNU6-613P-201ENST00000410412 108 ntBASIC1.42□□□□□ -2.18
SIMC1Q8NDZ2 RNU7-62P-201ENST00000458856 62 ntBASIC1.42□□□□□ -2.18
SIMC1Q8NDZ2 RNU11-2P-201ENST00000516898 142 ntBASIC1.42□□□□□ -2.18
SIMC1Q8NDZ2 AL513043.2-201ENST00000573941 143 ntBASIC1.42□□□□□ -2.18
SIMC1Q8NDZ2 AC090897.1-201ENST00000580909 226 ntBASIC1.42□□□□□ -2.18
SIMC1Q8NDZ2 MIR4452-201ENST00000583004 71 ntBASIC1.42□□□□□ -2.18
SIMC1Q8NDZ2 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.42□□□□□ -2.18
SIMC1Q8NDZ2 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.42□□□□□ -2.18
SIMC1Q8NDZ2 RNA5SP264-201ENST00000363115 107 ntBASIC1.41□□□□□ -2.18
SIMC1Q8NDZ2 RNU6-1125P-201ENST00000363601 107 ntBASIC1.41□□□□□ -2.18
SIMC1Q8NDZ2 RNU1-42P-201ENST00000364033 160 ntBASIC1.41□□□□□ -2.18
SIMC1Q8NDZ2 RNU6-654P-201ENST00000364373 107 ntBASIC1.41□□□□□ -2.18
SIMC1Q8NDZ2 RNU6-480P-201ENST00000384332 107 ntBASIC1.41□□□□□ -2.18
SIMC1Q8NDZ2 MIR320A-201ENST00000385302 82 ntBASIC1.41□□□□□ -2.18
SIMC1Q8NDZ2 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
SIMC1Q8NDZ2 MIR1304-201ENST00000408243 91 ntBASIC1.41□□□□□ -2.18
SIMC1Q8NDZ2 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.41□□□□□ -2.18
SIMC1Q8NDZ2 RNU6-638P-201ENST00000516582 104 ntBASIC1.41□□□□□ -2.18
SIMC1Q8NDZ2 MIR4500-201ENST00000579472 76 ntBASIC1.41□□□□□ -2.18
SIMC1Q8NDZ2 MIR6734-201ENST00000621166 68 ntBASIC1.41□□□□□ -2.18
SIMC1Q8NDZ2 AC025521.1-201ENST00000621624 286 ntBASIC1.41□□□□□ -2.18
SIMC1Q8NDZ2 U6.109-201ENST00000636749 87 ntBASIC1.41□□□□□ -2.18
SIMC1Q8NDZ2 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
SIMC1Q8NDZ2 MIR103A2-201ENST00000362154 78 ntBASIC1.4□□□□□ -2.19
SIMC1Q8NDZ2 RNA5SP133-201ENST00000363368 119 ntBASIC1.4□□□□□ -2.19
SIMC1Q8NDZ2 RNU6-787P-201ENST00000384032 107 ntBASIC1.4□□□□□ -2.19
SIMC1Q8NDZ2 RNA5SP95-201ENST00000410319 137 ntBASIC1.4□□□□□ -2.19
SIMC1Q8NDZ2 RNU6-1054P-201ENST00000411293 104 ntBASIC1.4□□□□□ -2.19
SIMC1Q8NDZ2 RNA5SP480-201ENST00000516840 109 ntBASIC1.4□□□□□ -2.19
SIMC1Q8NDZ2 MIR3202-2-201ENST00000635980 79 ntBASIC1.4□□□□□ -2.19
SIMC1Q8NDZ2 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
SIMC1Q8NDZ2 MIR377-201ENST00000362145 69 ntBASIC1.39□□□□□ -2.19
SIMC1Q8NDZ2 MIR26B-201ENST00000362251 77 ntBASIC1.39□□□□□ -2.19
SIMC1Q8NDZ2 RNU6-633P-201ENST00000362612 103 ntBASIC1.39□□□□□ -2.19
SIMC1Q8NDZ2 Y_RNA.119-201ENST00000363301 96 ntBASIC1.39□□□□□ -2.19
SIMC1Q8NDZ2 RNU6-509P-201ENST00000363519 107 ntBASIC1.39□□□□□ -2.19
SIMC1Q8NDZ2 SNORA7.1-201ENST00000363750 139 ntBASIC1.39□□□□□ -2.19
SIMC1Q8NDZ2 MIR222-201ENST00000384992 110 ntBASIC1.39□□□□□ -2.19
SIMC1Q8NDZ2 MIR1255A-201ENST00000408338 113 ntBASIC1.39□□□□□ -2.19
SIMC1Q8NDZ2 RNU4-83P-201ENST00000410863 133 ntBASIC1.39□□□□□ -2.19
SIMC1Q8NDZ2 RNU7-171P-201ENST00000459581 62 ntBASIC1.39□□□□□ -2.19
SIMC1Q8NDZ2 RNU1-92P-201ENST00000517017 135 ntBASIC1.39□□□□□ -2.19
SIMC1Q8NDZ2 RNU6-165P-201ENST00000517170 99 ntBASIC1.39□□□□□ -2.19
SIMC1Q8NDZ2 AC019288.1-201ENST00000557918 224 ntBASIC1.39□□□□□ -2.19
SIMC1Q8NDZ2 MIR548BB-201ENST00000626714 66 ntBASIC1.39□□□□□ -2.19
SIMC1Q8NDZ2 RNU6-580P-201ENST00000365159 107 ntBASIC1.38□□□□□ -2.19
SIMC1Q8NDZ2 MT-TF-201ENST00000387314 71 ntBASIC1.38□□□□□ -2.19
SIMC1Q8NDZ2 SNORA67.6-201ENST00000391093 99 ntBASIC1.38□□□□□ -2.19
SIMC1Q8NDZ2 Y_RNA.611-201ENST00000410682 108 ntBASIC1.38□□□□□ -2.19
SIMC1Q8NDZ2 RNA5SP225-201ENST00000410874 135 ntBASIC1.38□□□□□ -2.19
SIMC1Q8NDZ2 AL354695.1-201ENST00000427935 228 ntBASIC1.38□□□□□ -2.19
SIMC1Q8NDZ2 SNRPGP12-201ENST00000449481 213 ntBASIC1.38□□□□□ -2.19
SIMC1Q8NDZ2 RNU1-123P-201ENST00000458950 160 ntBASIC1.38□□□□□ -2.19
SIMC1Q8NDZ2 RNA5SP395-201ENST00000516567 118 ntBASIC1.38□□□□□ -2.19
SIMC1Q8NDZ2 SNORA70.22-201ENST00000517160 124 ntBASIC1.38□□□□□ -2.19
SIMC1Q8NDZ2 AL157834.3-201ENST00000615543 103 ntBASIC1.38□□□□□ -2.19
SIMC1Q8NDZ2 Y_RNA.426-201ENST00000384068 113 ntBASIC1.37□□□□□ -2.19
SIMC1Q8NDZ2 Y_RNA.540-201ENST00000384638 111 ntBASIC1.37□□□□□ -2.19
SIMC1Q8NDZ2 AL161932.1-201ENST00000437408 146 ntBASIC1.37□□□□□ -2.19
SIMC1Q8NDZ2 AC023790.1-201ENST00000482174 347 ntBASIC1.37□□□□□ -2.19
SIMC1Q8NDZ2 SNORA31.2-201ENST00000516019 134 ntBASIC1.37□□□□□ -2.19
SIMC1Q8NDZ2 RNU6-850P-201ENST00000516934 103 ntBASIC1.37□□□□□ -2.19
SIMC1Q8NDZ2 MIR4666B-201ENST00000578142 81 ntBASIC1.37□□□□□ -2.19
SIMC1Q8NDZ2 MIR8066-201ENST00000617280 78 ntBASIC1.37□□□□□ -2.19
SIMC1Q8NDZ2 AC006160.2-201ENST00000637708 154 ntBASIC1.37□□□□□ -2.19
SIMC1Q8NDZ2 AC008163.1-202ENST00000636004 2889 ntBASIC1.37□□□□□ -2.19
SIMC1Q8NDZ2 ZNF209P-201ENST00000593450 2304 ntBASIC1.37□□□□□ -2.19
SIMC1Q8NDZ2 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.36□□□□□ -2.19
SIMC1Q8NDZ2 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
SIMC1Q8NDZ2 SNORD115-27-201ENST00000364430 82 ntBASIC1.36□□□□□ -2.19
SIMC1Q8NDZ2 SNORA25-201ENST00000384384 134 ntBASIC1.36□□□□□ -2.19
SIMC1Q8NDZ2 SNORD12-201ENST00000391002 90 ntBASIC1.36□□□□□ -2.19
SIMC1Q8NDZ2 BX276092.1-201ENST00000427368 251 ntBASIC1.36□□□□□ -2.19
SIMC1Q8NDZ2 RNA5SP102-201ENST00000516865 106 ntBASIC1.36□□□□□ -2.19
SIMC1Q8NDZ2 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.36□□□□□ -2.19
SIMC1Q8NDZ2 RMST_2.1-201ENST00000617263 136 ntBASIC1.36□□□□□ -2.19
SIMC1Q8NDZ2 Y_RNA.57-201ENST00000362806 113 ntBASIC1.35□□□□□ -2.19
SIMC1Q8NDZ2 Y_RNA.313-201ENST00000365095 103 ntBASIC1.35□□□□□ -2.19
SIMC1Q8NDZ2 Y_RNA.437-201ENST00000384113 113 ntBASIC1.35□□□□□ -2.19
SIMC1Q8NDZ2 RNU6-571P-201ENST00000384128 107 ntBASIC1.35□□□□□ -2.19
SIMC1Q8NDZ2 MIR150-201ENST00000385048 84 ntBASIC1.35□□□□□ -2.19
SIMC1Q8NDZ2 MIR517C-201ENST00000385103 95 ntBASIC1.35□□□□□ -2.19
SIMC1Q8NDZ2 MIR618-201ENST00000385287 98 ntBASIC1.35□□□□□ -2.19
SIMC1Q8NDZ2 RNU7-40P-201ENST00000516397 64 ntBASIC1.35□□□□□ -2.19
SIMC1Q8NDZ2 RNA5SP61-201ENST00000516453 100 ntBASIC1.35□□□□□ -2.19
SIMC1Q8NDZ2 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.35□□□□□ -2.19
SIMC1Q8NDZ2 MIR4421-201ENST00000578133 69 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 198.7 ms