Protein–RNA interactions for Protein: Q8NA58

PNLDC1, Poly(A)-specific ribonuclease PNLDC1, humanhuman

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNLDC1Q8NA58 MIR4781-201ENST00000585250 76 ntBASIC1.12□□□□□ -2.23
PNLDC1Q8NA58 RNU6-90P-201ENST00000606352 106 ntBASIC1.12□□□□□ -2.23
PNLDC1Q8NA58 RNU6-86P-201ENST00000606534 107 ntBASIC1.12□□□□□ -2.23
PNLDC1Q8NA58 AL353770.2-201ENST00000620024 78 ntBASIC1.12□□□□□ -2.23
PNLDC1Q8NA58 Y_RNA.42-201ENST00000362660 108 ntBASIC1.11□□□□□ -2.23
PNLDC1Q8NA58 SNORD38.2-201ENST00000384470 69 ntBASIC1.11□□□□□ -2.23
PNLDC1Q8NA58 RNU6-813P-201ENST00000384691 107 ntBASIC1.11□□□□□ -2.23
PNLDC1Q8NA58 Y_RNA.567-201ENST00000384736 106 ntBASIC1.11□□□□□ -2.23
PNLDC1Q8NA58 RNY1P7-201ENST00000384743 110 ntBASIC1.11□□□□□ -2.23
PNLDC1Q8NA58 RNU4-83P-201ENST00000410863 133 ntBASIC1.11□□□□□ -2.23
PNLDC1Q8NA58 RNU1-123P-201ENST00000458950 160 ntBASIC1.11□□□□□ -2.23
PNLDC1Q8NA58 MIR4676-201ENST00000583078 72 ntBASIC1.11□□□□□ -2.23
PNLDC1Q8NA58 U7.3-201ENST00000616123 62 ntBASIC1.11□□□□□ -2.23
PNLDC1Q8NA58 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.11□□□□□ -2.23
PNLDC1Q8NA58 Y_RNA.13-201ENST00000362403 112 ntBASIC1.1□□□□□ -2.23
PNLDC1Q8NA58 RNU6-403P-201ENST00000363163 104 ntBASIC1.1□□□□□ -2.23
PNLDC1Q8NA58 MIR19B1-201ENST00000384829 87 ntBASIC1.1□□□□□ -2.23
PNLDC1Q8NA58 SPINT5P-201ENST00000448174 155 ntBASIC1.1□□□□□ -2.23
PNLDC1Q8NA58 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.1□□□□□ -2.23
PNLDC1Q8NA58 AL359821.1-201ENST00000605519 182 ntBASIC1.1□□□□□ -2.23
PNLDC1Q8NA58 MIR6082-201ENST00000613604 109 ntBASIC1.1□□□□□ -2.23
PNLDC1Q8NA58 MIR337-201ENST00000362281 93 ntBASIC1.09□□□□□ -2.23
PNLDC1Q8NA58 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
PNLDC1Q8NA58 BX276092.1-201ENST00000427368 251 ntBASIC1.09□□□□□ -2.23
PNLDC1Q8NA58 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.09□□□□□ -2.23
PNLDC1Q8NA58 RNU6-162P-201ENST00000516228 103 ntBASIC1.09□□□□□ -2.23
PNLDC1Q8NA58 Y_RNA.705-201ENST00000516862 110 ntBASIC1.09□□□□□ -2.23
PNLDC1Q8NA58 MTND5P40-201ENST00000559945 246 ntBASIC1.09□□□□□ -2.23
PNLDC1Q8NA58 AC103810.7-201ENST00000607821 91 ntBASIC1.09□□□□□ -2.23
PNLDC1Q8NA58 MIR6078-201ENST00000611069 100 ntBASIC1.09□□□□□ -2.23
PNLDC1Q8NA58 RNY1P10-201ENST00000363268 113 ntBASIC1.08□□□□□ -2.24
PNLDC1Q8NA58 Y_RNA.327-201ENST00000365201 102 ntBASIC1.08□□□□□ -2.24
PNLDC1Q8NA58 RNU6-939P-201ENST00000384634 107 ntBASIC1.08□□□□□ -2.24
PNLDC1Q8NA58 MIR222-201ENST00000384992 110 ntBASIC1.08□□□□□ -2.24
PNLDC1Q8NA58 MIR1827-201ENST00000408549 66 ntBASIC1.08□□□□□ -2.24
PNLDC1Q8NA58 RNU6-887P-201ENST00000410660 100 ntBASIC1.08□□□□□ -2.24
PNLDC1Q8NA58 TRMT112P2-201ENST00000512910 132 ntBASIC1.08□□□□□ -2.24
PNLDC1Q8NA58 RNU6-1194P-201ENST00000516208 104 ntBASIC1.08□□□□□ -2.24
PNLDC1Q8NA58 RNU6-850P-201ENST00000516934 103 ntBASIC1.08□□□□□ -2.24
PNLDC1Q8NA58 MIR4804-201ENST00000581683 73 ntBASIC1.08□□□□□ -2.24
PNLDC1Q8NA58 SNORD92-201ENST00000585078 85 ntBASIC1.08□□□□□ -2.24
PNLDC1Q8NA58 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.07□□□□□ -2.24
PNLDC1Q8NA58 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
PNLDC1Q8NA58 RNU4-58P-201ENST00000363192 141 ntBASIC1.07□□□□□ -2.24
PNLDC1Q8NA58 SNORD58A-201ENST00000383875 65 ntBASIC1.07□□□□□ -2.24
PNLDC1Q8NA58 RNU6-571P-201ENST00000384128 107 ntBASIC1.07□□□□□ -2.24
PNLDC1Q8NA58 SNORA72.6-201ENST00000384520 129 ntBASIC1.07□□□□□ -2.24
PNLDC1Q8NA58 RNU6-972P-201ENST00000391208 107 ntBASIC1.07□□□□□ -2.24
PNLDC1Q8NA58 RNU6-765P-201ENST00000516916 99 ntBASIC1.07□□□□□ -2.24
PNLDC1Q8NA58 RNU6-844P-201ENST00000517175 102 ntBASIC1.07□□□□□ -2.24
PNLDC1Q8NA58 RNU7-156P-201ENST00000517214 74 ntBASIC1.07□□□□□ -2.24
PNLDC1Q8NA58 AC013244.2-201ENST00000603396 103 ntBASIC1.07□□□□□ -2.24
PNLDC1Q8NA58 Y_RNA.190-201ENST00000363964 101 ntBASIC1.06□□□□□ -2.24
PNLDC1Q8NA58 MIR181B2-201ENST00000385004 89 ntBASIC1.06□□□□□ -2.24
PNLDC1Q8NA58 SNORA40.6-201ENST00000391153 128 ntBASIC1.06□□□□□ -2.24
PNLDC1Q8NA58 RNU6-994P-201ENST00000410507 111 ntBASIC1.06□□□□□ -2.24
PNLDC1Q8NA58 RNU7-56P-201ENST00000458744 62 ntBASIC1.06□□□□□ -2.24
PNLDC1Q8NA58 AC008608.1-201ENST00000603910 127 ntBASIC1.06□□□□□ -2.24
PNLDC1Q8NA58 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.06□□□□□ -2.24
PNLDC1Q8NA58 MIR4679-1-201ENST00000637619 75 ntBASIC1.06□□□□□ -2.24
PNLDC1Q8NA58 Y_RNA.96-201ENST00000363092 109 ntBASIC1.05□□□□□ -2.24
PNLDC1Q8NA58 Y_RNA.220-201ENST00000364244 109 ntBASIC1.05□□□□□ -2.24
PNLDC1Q8NA58 MIR938-201ENST00000401216 83 ntBASIC1.05□□□□□ -2.24
PNLDC1Q8NA58 SNORD100-201ENST00000408573 76 ntBASIC1.05□□□□□ -2.24
PNLDC1Q8NA58 RNU6-321P-201ENST00000410912 106 ntBASIC1.05□□□□□ -2.24
PNLDC1Q8NA58 AC019288.1-201ENST00000557918 224 ntBASIC1.05□□□□□ -2.24
PNLDC1Q8NA58 MIR3660-201ENST00000584845 100 ntBASIC1.05□□□□□ -2.24
PNLDC1Q8NA58 AC025521.1-201ENST00000621624 286 ntBASIC1.05□□□□□ -2.24
PNLDC1Q8NA58 RNU6-53P-201ENST00000365367 106 ntBASIC1.04□□□□□ -2.24
PNLDC1Q8NA58 MIR1285-1-201ENST00000408593 84 ntBASIC1.04□□□□□ -2.24
PNLDC1Q8NA58 RNU7-102P-201ENST00000458948 62 ntBASIC1.04□□□□□ -2.24
PNLDC1Q8NA58 SNORD124-201ENST00000459577 104 ntBASIC1.04□□□□□ -2.24
PNLDC1Q8NA58 AC004223.1-201ENST00000479840 271 ntBASIC1.04□□□□□ -2.24
PNLDC1Q8NA58 RNA5SP404-201ENST00000517118 132 ntBASIC1.04□□□□□ -2.24
PNLDC1Q8NA58 AL513043.2-201ENST00000573941 143 ntBASIC1.04□□□□□ -2.24
PNLDC1Q8NA58 RMST_2.1-201ENST00000617263 136 ntBASIC1.04□□□□□ -2.24
PNLDC1Q8NA58 MIR1-1-201ENST00000362147 71 ntBASIC1.03□□□□□ -2.24
PNLDC1Q8NA58 RNU1-124P-201ENST00000363861 145 ntBASIC1.03□□□□□ -2.24
PNLDC1Q8NA58 RNU6-294P-201ENST00000364999 102 ntBASIC1.03□□□□□ -2.24
PNLDC1Q8NA58 MIR100-201ENST00000385259 80 ntBASIC1.03□□□□□ -2.24
PNLDC1Q8NA58 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.03□□□□□ -2.24
PNLDC1Q8NA58 RNU7-106P-201ENST00000459514 67 ntBASIC1.03□□□□□ -2.24
PNLDC1Q8NA58 RNU6-977P-201ENST00000516411 103 ntBASIC1.03□□□□□ -2.24
PNLDC1Q8NA58 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
PNLDC1Q8NA58 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
PNLDC1Q8NA58 RNU6-1125P-201ENST00000363601 107 ntBASIC1.02□□□□□ -2.25
PNLDC1Q8NA58 SNORD116-10-201ENST00000363791 102 ntBASIC1.02□□□□□ -2.25
PNLDC1Q8NA58 RNU6-392P-201ENST00000364926 101 ntBASIC1.02□□□□□ -2.25
PNLDC1Q8NA58 RNU6-480P-201ENST00000384332 107 ntBASIC1.02□□□□□ -2.25
PNLDC1Q8NA58 TRAJ51-201ENST00000504127 63 ntBASIC1.02□□□□□ -2.25
PNLDC1Q8NA58 AC026421.1-201ENST00000519101 163 ntBASIC1.02□□□□□ -2.25
PNLDC1Q8NA58 Y_RNA.56-201ENST00000362798 112 ntBASIC1.01□□□□□ -2.25
PNLDC1Q8NA58 Y_RNA.57-201ENST00000362806 113 ntBASIC1.01□□□□□ -2.25
PNLDC1Q8NA58 RNU6-364P-201ENST00000384387 107 ntBASIC1.01□□□□□ -2.25
PNLDC1Q8NA58 MIR516A2-201ENST00000384888 90 ntBASIC1.01□□□□□ -2.25
PNLDC1Q8NA58 MIR516A1-201ENST00000385033 90 ntBASIC1.01□□□□□ -2.25
PNLDC1Q8NA58 RNU6-448P-201ENST00000517052 107 ntBASIC1.01□□□□□ -2.25
PNLDC1Q8NA58 AC006254.2-201ENST00000603259 279 ntBASIC1.01□□□□□ -2.25
PNLDC1Q8NA58 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
PNLDC1Q8NA58 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 286.2 ms