Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 Y_RNA.377-201ENST00000365644 108 ntBASIC0.91□□□□□ -2.26
CLIP4Q8N3C7 MIR590-201ENST00000385008 97 ntBASIC0.91□□□□□ -2.26
CLIP4Q8N3C7 MIR942-201ENST00000401111 86 ntBASIC0.91□□□□□ -2.26
CLIP4Q8N3C7 MIR1827-201ENST00000408549 66 ntBASIC0.91□□□□□ -2.26
CLIP4Q8N3C7 FABP5P4-201ENST00000437203 171 ntBASIC0.91□□□□□ -2.26
CLIP4Q8N3C7 RNU7-56P-201ENST00000458744 62 ntBASIC0.91□□□□□ -2.26
CLIP4Q8N3C7 RNU6-1006P-201ENST00000516998 103 ntBASIC0.91□□□□□ -2.26
CLIP4Q8N3C7 AC090897.1-201ENST00000580909 226 ntBASIC0.91□□□□□ -2.26
CLIP4Q8N3C7 AC096720.1-201ENST00000604441 183 ntBASIC0.91□□□□□ -2.26
CLIP4Q8N3C7 MIR6082-201ENST00000613604 109 ntBASIC0.91□□□□□ -2.26
CLIP4Q8N3C7 Y_RNA.10-201ENST00000362371 110 ntBASIC0.9□□□□□ -2.27
CLIP4Q8N3C7 RNU4-58P-201ENST00000363192 141 ntBASIC0.9□□□□□ -2.27
CLIP4Q8N3C7 SNORD38.2-201ENST00000384470 69 ntBASIC0.9□□□□□ -2.27
CLIP4Q8N3C7 MIR520F-201ENST00000384824 87 ntBASIC0.9□□□□□ -2.27
CLIP4Q8N3C7 MIR200A-201ENST00000384875 90 ntBASIC0.9□□□□□ -2.27
CLIP4Q8N3C7 MIR1287-201ENST00000408492 90 ntBASIC0.9□□□□□ -2.27
CLIP4Q8N3C7 Y_RNA.601-201ENST00000410500 113 ntBASIC0.9□□□□□ -2.27
CLIP4Q8N3C7 RNU6-904P-201ENST00000516206 101 ntBASIC0.9□□□□□ -2.27
CLIP4Q8N3C7 MTND5P40-201ENST00000559945 246 ntBASIC0.9□□□□□ -2.27
CLIP4Q8N3C7 SNORD114-24-201ENST00000365029 72 ntBASIC0.89□□□□□ -2.27
CLIP4Q8N3C7 MIR499A-201ENST00000384903 122 ntBASIC0.89□□□□□ -2.27
CLIP4Q8N3C7 SPINT5P-201ENST00000448174 155 ntBASIC0.89□□□□□ -2.27
CLIP4Q8N3C7 RNU7-102P-201ENST00000458948 62 ntBASIC0.89□□□□□ -2.27
CLIP4Q8N3C7 U7.7-201ENST00000459276 60 ntBASIC0.89□□□□□ -2.27
CLIP4Q8N3C7 Y_RNA.659-201ENST00000515994 113 ntBASIC0.89□□□□□ -2.27
CLIP4Q8N3C7 RNA5SP102-201ENST00000516865 106 ntBASIC0.89□□□□□ -2.27
CLIP4Q8N3C7 SNORD92-201ENST00000585078 85 ntBASIC0.89□□□□□ -2.27
CLIP4Q8N3C7 AC013244.2-201ENST00000603396 103 ntBASIC0.89□□□□□ -2.27
CLIP4Q8N3C7 RNU6-90P-201ENST00000606352 106 ntBASIC0.89□□□□□ -2.27
CLIP4Q8N3C7 AL136317.1-201ENST00000612653 226 ntBASIC0.89□□□□□ -2.27
CLIP4Q8N3C7 MIR8066-201ENST00000617280 78 ntBASIC0.89□□□□□ -2.27
CLIP4Q8N3C7 RNU1-119P-201ENST00000391122 165 ntBASIC0.88□□□□□ -2.27
CLIP4Q8N3C7 MIR548G-201ENST00000408442 89 ntBASIC0.88□□□□□ -2.27
CLIP4Q8N3C7 MIR1276-201ENST00000408707 83 ntBASIC0.88□□□□□ -2.27
CLIP4Q8N3C7 SCARNA23-201ENST00000516060 130 ntBASIC0.88□□□□□ -2.27
CLIP4Q8N3C7 RNU6-109P-201ENST00000516364 107 ntBASIC0.88□□□□□ -2.27
CLIP4Q8N3C7 RNU6-1110P-201ENST00000516462 101 ntBASIC0.88□□□□□ -2.27
CLIP4Q8N3C7 RNU6-184P-201ENST00000516514 107 ntBASIC0.88□□□□□ -2.27
CLIP4Q8N3C7 RNU6-537P-201ENST00000517277 103 ntBASIC0.88□□□□□ -2.27
CLIP4Q8N3C7 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
CLIP4Q8N3C7 Y_RNA.42-201ENST00000362660 108 ntBASIC0.87□□□□□ -2.27
CLIP4Q8N3C7 MTATP6P29-201ENST00000415057 132 ntBASIC0.87□□□□□ -2.27
CLIP4Q8N3C7 BX276092.1-201ENST00000427368 251 ntBASIC0.87□□□□□ -2.27
CLIP4Q8N3C7 AC008608.1-201ENST00000603910 127 ntBASIC0.87□□□□□ -2.27
CLIP4Q8N3C7 RMST_2.1-201ENST00000617263 136 ntBASIC0.87□□□□□ -2.27
CLIP4Q8N3C7 HSBP1P2-201ENST00000299671 229 ntBASIC0.86□□□□□ -2.27
CLIP4Q8N3C7 SNORD45B-201ENST00000364617 72 ntBASIC0.86□□□□□ -2.27
CLIP4Q8N3C7 RNU6-32P-201ENST00000383948 107 ntBASIC0.86□□□□□ -2.27
CLIP4Q8N3C7 RNU6-13P-201ENST00000384248 107 ntBASIC0.86□□□□□ -2.27
CLIP4Q8N3C7 Y_RNA.495-201ENST00000384435 112 ntBASIC0.86□□□□□ -2.27
CLIP4Q8N3C7 RNU6-12P-201ENST00000384604 107 ntBASIC0.86□□□□□ -2.27
CLIP4Q8N3C7 RNU6-41P-201ENST00000384741 107 ntBASIC0.86□□□□□ -2.27
CLIP4Q8N3C7 MIR520H-201ENST00000385126 88 ntBASIC0.86□□□□□ -2.27
CLIP4Q8N3C7 RNU6-795P-201ENST00000516323 103 ntBASIC0.86□□□□□ -2.27
CLIP4Q8N3C7 RNU6-765P-201ENST00000516916 99 ntBASIC0.86□□□□□ -2.27
CLIP4Q8N3C7 AC091304.10-201ENST00000641554 121 ntBASIC0.86□□□□□ -2.27
CLIP4Q8N3C7 MIR101-2-201ENST00000362195 79 ntBASIC0.85□□□□□ -2.27
CLIP4Q8N3C7 RNU6-170P-201ENST00000362832 104 ntBASIC0.85□□□□□ -2.27
CLIP4Q8N3C7 Y_RNA.544-201ENST00000384650 113 ntBASIC0.85□□□□□ -2.27
CLIP4Q8N3C7 SNORD105-201ENST00000386910 85 ntBASIC0.85□□□□□ -2.27
CLIP4Q8N3C7 AC109327.2-201ENST00000448339 378 ntBASIC0.85□□□□□ -2.27
CLIP4Q8N3C7 RNU6-1194P-201ENST00000516208 104 ntBASIC0.85□□□□□ -2.27
CLIP4Q8N3C7 RNU6-86P-201ENST00000606534 107 ntBASIC0.85□□□□□ -2.27
CLIP4Q8N3C7 MIR6504-201ENST00000613520 61 ntBASIC0.85□□□□□ -2.27
CLIP4Q8N3C7 AC012531.4-201ENST00000616509 177 ntBASIC0.85□□□□□ -2.27
CLIP4Q8N3C7 Y_RNA.818-201ENST00000618813 71 ntBASIC0.85□□□□□ -2.27
CLIP4Q8N3C7 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
CLIP4Q8N3C7 Y_RNA.95-201ENST00000363079 95 ntBASIC0.84□□□□□ -2.27
CLIP4Q8N3C7 Y_RNA.224-201ENST00000364308 111 ntBASIC0.84□□□□□ -2.27
CLIP4Q8N3C7 RNU6-1163P-201ENST00000364516 107 ntBASIC0.84□□□□□ -2.27
CLIP4Q8N3C7 RNU6-1335P-201ENST00000365426 107 ntBASIC0.84□□□□□ -2.27
CLIP4Q8N3C7 Y_RNA.567-201ENST00000384736 106 ntBASIC0.84□□□□□ -2.27
CLIP4Q8N3C7 MIR146A-201ENST00000385201 99 ntBASIC0.84□□□□□ -2.27
CLIP4Q8N3C7 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.84□□□□□ -2.27
CLIP4Q8N3C7 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.84□□□□□ -2.27
CLIP4Q8N3C7 RNA5SP255-201ENST00000516370 107 ntBASIC0.84□□□□□ -2.27
CLIP4Q8N3C7 Y_RNA.697-201ENST00000516776 113 ntBASIC0.84□□□□□ -2.27
CLIP4Q8N3C7 AC025627.3-201ENST00000582078 182 ntBASIC0.84□□□□□ -2.27
CLIP4Q8N3C7 AP001318.4-201ENST00000616637 121 ntBASIC0.84□□□□□ -2.27
CLIP4Q8N3C7 SNORD114-27-201ENST00000363766 70 ntBASIC0.83□□□□□ -2.28
CLIP4Q8N3C7 Y_RNA.173-201ENST00000363776 113 ntBASIC0.83□□□□□ -2.28
CLIP4Q8N3C7 Y_RNA.191-201ENST00000363972 113 ntBASIC0.83□□□□□ -2.28
CLIP4Q8N3C7 SNORD100-201ENST00000408573 76 ntBASIC0.83□□□□□ -2.28
CLIP4Q8N3C7 AC004941.2-201ENST00000427009 228 ntBASIC0.83□□□□□ -2.28
CLIP4Q8N3C7 RNU6-168P-201ENST00000516189 101 ntBASIC0.83□□□□□ -2.28
CLIP4Q8N3C7 RNU6-850P-201ENST00000516934 103 ntBASIC0.83□□□□□ -2.28
CLIP4Q8N3C7 MIR4661-201ENST00000582720 75 ntBASIC0.83□□□□□ -2.28
CLIP4Q8N3C7 MIR4777-201ENST00000583710 86 ntBASIC0.83□□□□□ -2.28
CLIP4Q8N3C7 MIR548Z-201ENST00000584743 97 ntBASIC0.83□□□□□ -2.28
CLIP4Q8N3C7 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.83□□□□□ -2.28
CLIP4Q8N3C7 MIR96-201ENST00000362288 78 ntBASIC0.82□□□□□ -2.28
CLIP4Q8N3C7 Y_RNA.93-201ENST00000363066 109 ntBASIC0.82□□□□□ -2.28
CLIP4Q8N3C7 Y_RNA.107-201ENST00000363190 121 ntBASIC0.82□□□□□ -2.28
CLIP4Q8N3C7 RNU6-571P-201ENST00000384128 107 ntBASIC0.82□□□□□ -2.28
CLIP4Q8N3C7 Y_RNA.467-201ENST00000384297 102 ntBASIC0.82□□□□□ -2.28
CLIP4Q8N3C7 RNA5SP89-201ENST00000410300 108 ntBASIC0.82□□□□□ -2.28
CLIP4Q8N3C7 SNRPGP12-201ENST00000449481 213 ntBASIC0.82□□□□□ -2.28
CLIP4Q8N3C7 RNU6-448P-201ENST00000517052 107 ntBASIC0.82□□□□□ -2.28
CLIP4Q8N3C7 MIR4439-201ENST00000583746 80 ntBASIC0.82□□□□□ -2.28
CLIP4Q8N3C7 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 165.2 ms