Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.44□□□□□ -2.18
TRIM48Q8IWZ4 ZNF209P-201ENST00000593450 2304 ntBASIC1.44□□□□□ -2.18
TRIM48Q8IWZ4 Y_RNA.13-201ENST00000362403 112 ntBASIC1.44□□□□□ -2.18
TRIM48Q8IWZ4 MIR222-201ENST00000384992 110 ntBASIC1.44□□□□□ -2.18
TRIM48Q8IWZ4 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.44□□□□□ -2.18
TRIM48Q8IWZ4 RNU6-994P-201ENST00000410507 111 ntBASIC1.44□□□□□ -2.18
TRIM48Q8IWZ4 SNRPGP12-201ENST00000449481 213 ntBASIC1.44□□□□□ -2.18
TRIM48Q8IWZ4 AL513043.2-201ENST00000573941 143 ntBASIC1.44□□□□□ -2.18
TRIM48Q8IWZ4 AC062037.1-201ENST00000605302 128 ntBASIC1.44□□□□□ -2.18
TRIM48Q8IWZ4 snoU13.31-201ENST00000607291 104 ntBASIC1.44□□□□□ -2.18
TRIM48Q8IWZ4 Y_RNA.17-201ENST00000362433 111 ntBASIC1.43□□□□□ -2.18
TRIM48Q8IWZ4 RNU4-58P-201ENST00000363192 141 ntBASIC1.43□□□□□ -2.18
TRIM48Q8IWZ4 RNY1P10-201ENST00000363268 113 ntBASIC1.43□□□□□ -2.18
TRIM48Q8IWZ4 Y_RNA.593-201ENST00000410292 98 ntBASIC1.43□□□□□ -2.18
TRIM48Q8IWZ4 AP1B1P2-201ENST00000416196 106 ntBASIC1.43□□□□□ -2.18
TRIM48Q8IWZ4 RPS26P5-201ENST00000418544 335 ntBASIC1.43□□□□□ -2.18
TRIM48Q8IWZ4 RNU7-95P-201ENST00000459222 64 ntBASIC1.43□□□□□ -2.18
TRIM48Q8IWZ4 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
TRIM48Q8IWZ4 MIR494-201ENST00000349529 81 ntBASIC1.42□□□□□ -2.18
TRIM48Q8IWZ4 Y_RNA.57-201ENST00000362806 113 ntBASIC1.42□□□□□ -2.18
TRIM48Q8IWZ4 RNU6-1125P-201ENST00000363601 107 ntBASIC1.42□□□□□ -2.18
TRIM48Q8IWZ4 SNORD116-10-201ENST00000363791 102 ntBASIC1.42□□□□□ -2.18
TRIM48Q8IWZ4 RNU6-53P-201ENST00000365367 106 ntBASIC1.42□□□□□ -2.18
TRIM48Q8IWZ4 Y_RNA.388-201ENST00000383919 113 ntBASIC1.42□□□□□ -2.18
TRIM48Q8IWZ4 RNU6-480P-201ENST00000384332 107 ntBASIC1.42□□□□□ -2.18
TRIM48Q8IWZ4 MIR125B2-201ENST00000385128 89 ntBASIC1.42□□□□□ -2.18
TRIM48Q8IWZ4 SNORA26.2-201ENST00000390922 122 ntBASIC1.42□□□□□ -2.18
TRIM48Q8IWZ4 RNU6-402P-201ENST00000410678 103 ntBASIC1.42□□□□□ -2.18
TRIM48Q8IWZ4 RNY4P29-201ENST00000410801 97 ntBASIC1.42□□□□□ -2.18
TRIM48Q8IWZ4 SNORA72.7-201ENST00000516349 94 ntBASIC1.42□□□□□ -2.18
TRIM48Q8IWZ4 MIR4676-201ENST00000583078 72 ntBASIC1.42□□□□□ -2.18
TRIM48Q8IWZ4 MIR6082-201ENST00000613604 109 ntBASIC1.42□□□□□ -2.18
TRIM48Q8IWZ4 Y_RNA.609-201ENST00000410669 89 ntBASIC1.41□□□□□ -2.18
TRIM48Q8IWZ4 AC002429.1-201ENST00000437672 148 ntBASIC1.41□□□□□ -2.18
TRIM48Q8IWZ4 RNU7-156P-201ENST00000517214 74 ntBASIC1.41□□□□□ -2.18
TRIM48Q8IWZ4 MIR4498-201ENST00000577599 66 ntBASIC1.41□□□□□ -2.18
TRIM48Q8IWZ4 MIR4781-201ENST00000585250 76 ntBASIC1.41□□□□□ -2.18
TRIM48Q8IWZ4 MIR8066-201ENST00000617280 78 ntBASIC1.41□□□□□ -2.18
TRIM48Q8IWZ4 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
TRIM48Q8IWZ4 RNY1P4-201ENST00000384595 115 ntBASIC1.4□□□□□ -2.19
TRIM48Q8IWZ4 RNU6-1053P-201ENST00000515930 101 ntBASIC1.4□□□□□ -2.19
TRIM48Q8IWZ4 RNU6-267P-201ENST00000516714 103 ntBASIC1.4□□□□□ -2.19
TRIM48Q8IWZ4 RNU6-369P-201ENST00000362515 102 ntBASIC1.39□□□□□ -2.19
TRIM48Q8IWZ4 SNORA7.1-201ENST00000363750 139 ntBASIC1.39□□□□□ -2.19
TRIM48Q8IWZ4 RNU6-571P-201ENST00000384128 107 ntBASIC1.39□□□□□ -2.19
TRIM48Q8IWZ4 SNORA25-201ENST00000384384 134 ntBASIC1.39□□□□□ -2.19
TRIM48Q8IWZ4 MIR516A2-201ENST00000384888 90 ntBASIC1.39□□□□□ -2.19
TRIM48Q8IWZ4 MIR450A2-201ENST00000385022 100 ntBASIC1.39□□□□□ -2.19
TRIM48Q8IWZ4 MIR516A1-201ENST00000385033 90 ntBASIC1.39□□□□□ -2.19
TRIM48Q8IWZ4 AL157834.3-201ENST00000615543 103 ntBASIC1.39□□□□□ -2.19
TRIM48Q8IWZ4 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
TRIM48Q8IWZ4 MIR101-2-201ENST00000362195 79 ntBASIC1.38□□□□□ -2.19
TRIM48Q8IWZ4 RNU6-364P-201ENST00000384387 107 ntBASIC1.38□□□□□ -2.19
TRIM48Q8IWZ4 SNORD116-22-201ENST00000384430 92 ntBASIC1.38□□□□□ -2.19
TRIM48Q8IWZ4 MIR100-201ENST00000385259 80 ntBASIC1.38□□□□□ -2.19
TRIM48Q8IWZ4 MIR320A-201ENST00000385302 82 ntBASIC1.38□□□□□ -2.19
TRIM48Q8IWZ4 SNORD100-201ENST00000408573 76 ntBASIC1.38□□□□□ -2.19
TRIM48Q8IWZ4 MIR1302-4-201ENST00000408701 150 ntBASIC1.38□□□□□ -2.19
TRIM48Q8IWZ4 RNU7-106P-201ENST00000459514 67 ntBASIC1.38□□□□□ -2.19
TRIM48Q8IWZ4 RNU6-1194P-201ENST00000516208 104 ntBASIC1.38□□□□□ -2.19
TRIM48Q8IWZ4 MIR4421-201ENST00000578133 69 ntBASIC1.38□□□□□ -2.19
TRIM48Q8IWZ4 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
TRIM48Q8IWZ4 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.37□□□□□ -2.19
TRIM48Q8IWZ4 RNU6-977P-201ENST00000516411 103 ntBASIC1.37□□□□□ -2.19
TRIM48Q8IWZ4 IGLL4P-201ENST00000614590 133 ntBASIC1.37□□□□□ -2.19
TRIM48Q8IWZ4 AC027335.2-201ENST00000624030 375 ntBASIC1.37□□□□□ -2.19
TRIM48Q8IWZ4 MIR1-1-201ENST00000362147 71 ntBASIC1.36□□□□□ -2.19
TRIM48Q8IWZ4 Y_RNA.42-201ENST00000362660 108 ntBASIC1.36□□□□□ -2.19
TRIM48Q8IWZ4 Y_RNA.73-201ENST00000362910 113 ntBASIC1.36□□□□□ -2.19
TRIM48Q8IWZ4 Y_RNA.191-201ENST00000363972 113 ntBASIC1.36□□□□□ -2.19
TRIM48Q8IWZ4 RNY1P1-201ENST00000364372 112 ntBASIC1.36□□□□□ -2.19
TRIM48Q8IWZ4 MIR938-201ENST00000401216 83 ntBASIC1.36□□□□□ -2.19
TRIM48Q8IWZ4 RN7SKP12-201ENST00000516275 143 ntBASIC1.36□□□□□ -2.19
TRIM48Q8IWZ4 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.36□□□□□ -2.19
TRIM48Q8IWZ4 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.36□□□□□ -2.19
TRIM48Q8IWZ4 MIR4804-201ENST00000581683 73 ntBASIC1.36□□□□□ -2.19
TRIM48Q8IWZ4 MIR4668-201ENST00000582284 70 ntBASIC1.36□□□□□ -2.19
TRIM48Q8IWZ4 AC008608.1-201ENST00000603910 127 ntBASIC1.36□□□□□ -2.19
TRIM48Q8IWZ4 MIR7974-201ENST00000615835 79 ntBASIC1.36□□□□□ -2.19
TRIM48Q8IWZ4 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
TRIM48Q8IWZ4 SNORD12-201ENST00000391002 90 ntBASIC1.35□□□□□ -2.19
TRIM48Q8IWZ4 SNORD63B-201ENST00000411005 70 ntBASIC1.35□□□□□ -2.19
TRIM48Q8IWZ4 RNU7-102P-201ENST00000458948 62 ntBASIC1.35□□□□□ -2.19
TRIM48Q8IWZ4 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.35□□□□□ -2.19
TRIM48Q8IWZ4 TRAJ51-201ENST00000504127 63 ntBASIC1.35□□□□□ -2.19
TRIM48Q8IWZ4 Y_RNA.697-201ENST00000516776 113 ntBASIC1.35□□□□□ -2.19
TRIM48Q8IWZ4 AL359821.1-201ENST00000605519 182 ntBASIC1.35□□□□□ -2.19
TRIM48Q8IWZ4 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.35□□□□□ -2.19
TRIM48Q8IWZ4 RNU6-219P-201ENST00000364728 107 ntBASIC1.34□□□□□ -2.19
TRIM48Q8IWZ4 RNA5SP173-201ENST00000364857 136 ntBASIC1.34□□□□□ -2.19
TRIM48Q8IWZ4 RNU6-573P-201ENST00000383938 106 ntBASIC1.34□□□□□ -2.19
TRIM48Q8IWZ4 Y_RNA.536-201ENST00000384621 113 ntBASIC1.34□□□□□ -2.19
TRIM48Q8IWZ4 MIR520F-201ENST00000384824 87 ntBASIC1.34□□□□□ -2.19
TRIM48Q8IWZ4 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.34□□□□□ -2.19
TRIM48Q8IWZ4 RNU6-592P-201ENST00000411333 103 ntBASIC1.34□□□□□ -2.19
TRIM48Q8IWZ4 SNORD92-201ENST00000585078 85 ntBASIC1.34□□□□□ -2.19
TRIM48Q8IWZ4 MIR337-201ENST00000362281 93 ntBASIC1.33□□□□□ -2.2
TRIM48Q8IWZ4 MIR635-201ENST00000384830 98 ntBASIC1.33□□□□□ -2.2
TRIM48Q8IWZ4 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
TRIM48Q8IWZ4 RNU6-955P-201ENST00000410497 104 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 407.1 ms