Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 MIR3666-201ENST00000607845 111 ntBASIC-0.5□□□□□ -2.49
NUDCD3Q8IVD9 RNU6-170P-201ENST00000362832 104 ntBASIC-0.51□□□□□ -2.49
NUDCD3Q8IVD9 RNU6-524P-201ENST00000384270 107 ntBASIC-0.51□□□□□ -2.49
NUDCD3Q8IVD9 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.51□□□□□ -2.49
NUDCD3Q8IVD9 SNORA75.5-201ENST00000391291 81 ntBASIC-0.51□□□□□ -2.49
NUDCD3Q8IVD9 SNORD58.1-201ENST00000391313 66 ntBASIC-0.51□□□□□ -2.49
NUDCD3Q8IVD9 RNU7-74P-201ENST00000459104 62 ntBASIC-0.51□□□□□ -2.49
NUDCD3Q8IVD9 RNU6-320P-201ENST00000516511 106 ntBASIC-0.51□□□□□ -2.49
NUDCD3Q8IVD9 AL117187.1-201ENST00000555482 181 ntBASIC-0.51□□□□□ -2.49
NUDCD3Q8IVD9 RNU6-918P-201ENST00000391219 106 ntBASIC-0.52□□□□□ -2.49
NUDCD3Q8IVD9 AC107027.2-201ENST00000512197 115 ntBASIC-0.52□□□□□ -2.49
NUDCD3Q8IVD9 MTND5P40-201ENST00000559945 246 ntBASIC-0.52□□□□□ -2.49
NUDCD3Q8IVD9 MIR376B-201ENST00000614515 100 ntBASIC-0.52□□□□□ -2.49
NUDCD3Q8IVD9 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.53□□□□□ -2.49
NUDCD3Q8IVD9 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.53□□□□□ -2.49
NUDCD3Q8IVD9 RNU6-508P-201ENST00000363231 103 ntBASIC-0.53□□□□□ -2.49
NUDCD3Q8IVD9 RNU1-141P-201ENST00000364623 158 ntBASIC-0.53□□□□□ -2.49
NUDCD3Q8IVD9 RNU6-616P-201ENST00000384353 107 ntBASIC-0.53□□□□□ -2.49
NUDCD3Q8IVD9 RNU6-588P-201ENST00000410281 105 ntBASIC-0.53□□□□□ -2.49
NUDCD3Q8IVD9 Y_RNA.651-201ENST00000459380 103 ntBASIC-0.53□□□□□ -2.49
NUDCD3Q8IVD9 RNA5SP285-201ENST00000516619 119 ntBASIC-0.53□□□□□ -2.49
NUDCD3Q8IVD9 Y_RNA.20-201ENST00000362479 113 ntBASIC-0.54□□□□□ -2.5
NUDCD3Q8IVD9 SNORD114-31-201ENST00000363219 75 ntBASIC-0.54□□□□□ -2.5
NUDCD3Q8IVD9 Y_RNA.149-201ENST00000363558 117 ntBASIC-0.54□□□□□ -2.5
NUDCD3Q8IVD9 Y_RNA.337-201ENST00000365312 102 ntBASIC-0.54□□□□□ -2.5
NUDCD3Q8IVD9 RNA5SP300-201ENST00000391197 107 ntBASIC-0.54□□□□□ -2.5
NUDCD3Q8IVD9 RNU7-106P-201ENST00000459514 67 ntBASIC-0.54□□□□□ -2.5
NUDCD3Q8IVD9 MIR4645-201ENST00000583158 77 ntBASIC-0.54□□□□□ -2.5
NUDCD3Q8IVD9 MIR4473-201ENST00000583731 91 ntBASIC-0.54□□□□□ -2.5
NUDCD3Q8IVD9 AC008737.2-201ENST00000599446 118 ntBASIC-0.54□□□□□ -2.5
NUDCD3Q8IVD9 RN7SL660P-201ENST00000614852 299 ntBASIC-0.54□□□□□ -2.5
NUDCD3Q8IVD9 MIR6844-201ENST00000637122 62 ntBASIC-0.54□□□□□ -2.5
NUDCD3Q8IVD9 SNORD115-35-201ENST00000365122 82 ntBASIC-0.55□□□□□ -2.5
NUDCD3Q8IVD9 RNU6-571P-201ENST00000384128 107 ntBASIC-0.55□□□□□ -2.5
NUDCD3Q8IVD9 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.55□□□□□ -2.5
NUDCD3Q8IVD9 MIR606-201ENST00000384851 96 ntBASIC-0.55□□□□□ -2.5
NUDCD3Q8IVD9 AL162726.3-218ENST00000636401 95 ntBASIC-0.55□□□□□ -2.5
NUDCD3Q8IVD9 MIR6759-201ENST00000638110 65 ntBASIC-0.55□□□□□ -2.5
NUDCD3Q8IVD9 RNA5SP275-201ENST00000363936 118 ntBASIC-0.56□□□□□ -2.5
NUDCD3Q8IVD9 Y_RNA.326-201ENST00000365176 113 ntBASIC-0.56□□□□□ -2.5
NUDCD3Q8IVD9 Y_RNA.435-201ENST00000384095 112 ntBASIC-0.56□□□□□ -2.5
NUDCD3Q8IVD9 MIR548AG2-201ENST00000581228 64 ntBASIC-0.56□□□□□ -2.5
NUDCD3Q8IVD9 MIR8064-201ENST00000612863 90 ntBASIC-0.56□□□□□ -2.5
NUDCD3Q8IVD9 MIR6507-201ENST00000613630 70 ntBASIC-0.56□□□□□ -2.5
NUDCD3Q8IVD9 Y_RNA.145-201ENST00000363527 102 ntBASIC-0.57□□□□□ -2.5
NUDCD3Q8IVD9 RNU6-309P-201ENST00000364573 106 ntBASIC-0.57□□□□□ -2.5
NUDCD3Q8IVD9 U8.6-201ENST00000364939 135 ntBASIC-0.57□□□□□ -2.5
NUDCD3Q8IVD9 SNORD18B-201ENST00000365659 72 ntBASIC-0.57□□□□□ -2.5
NUDCD3Q8IVD9 Y_RNA.604-201ENST00000410574 102 ntBASIC-0.57□□□□□ -2.5
NUDCD3Q8IVD9 AC244250.2-201ENST00000418731 148 ntBASIC-0.57□□□□□ -2.5
NUDCD3Q8IVD9 RNU4-71P-201ENST00000516258 113 ntBASIC-0.57□□□□□ -2.5
NUDCD3Q8IVD9 RNY4P20-201ENST00000516678 93 ntBASIC-0.57□□□□□ -2.5
NUDCD3Q8IVD9 RNU7-188P-201ENST00000517063 64 ntBASIC-0.57□□□□□ -2.5
NUDCD3Q8IVD9 SNORD114-28-201ENST00000363610 72 ntBASIC-0.58□□□□□ -2.5
NUDCD3Q8IVD9 RNY1P11-201ENST00000363759 113 ntBASIC-0.58□□□□□ -2.5
NUDCD3Q8IVD9 RNU6-312P-201ENST00000364629 107 ntBASIC-0.58□□□□□ -2.5
NUDCD3Q8IVD9 RNU6-47P-201ENST00000383866 107 ntBASIC-0.58□□□□□ -2.5
NUDCD3Q8IVD9 RNU6-811P-201ENST00000384069 107 ntBASIC-0.58□□□□□ -2.5
NUDCD3Q8IVD9 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.58□□□□□ -2.5
NUDCD3Q8IVD9 MIR519E-201ENST00000385075 84 ntBASIC-0.58□□□□□ -2.5
NUDCD3Q8IVD9 RNU6-850P-201ENST00000516934 103 ntBASIC-0.58□□□□□ -2.5
NUDCD3Q8IVD9 MIR3646-201ENST00000578301 84 ntBASIC-0.58□□□□□ -2.5
NUDCD3Q8IVD9 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.58□□□□□ -2.5
NUDCD3Q8IVD9 MIR4788-201ENST00000639104 80 ntBASIC-0.58□□□□□ -2.5
NUDCD3Q8IVD9 Y_RNA.459-201ENST00000384251 102 ntBASIC-0.59□□□□□ -2.5
NUDCD3Q8IVD9 MIR34C-201ENST00000384831 77 ntBASIC-0.59□□□□□ -2.5
NUDCD3Q8IVD9 AC096531.1-201ENST00000419107 107 ntBASIC-0.59□□□□□ -2.5
NUDCD3Q8IVD9 Y_RNA.690-201ENST00000516603 95 ntBASIC-0.59□□□□□ -2.5
NUDCD3Q8IVD9 YWHAEP2-201ENST00000580066 112 ntBASIC-0.59□□□□□ -2.5
NUDCD3Q8IVD9 MIR3128-201ENST00000581957 66 ntBASIC-0.59□□□□□ -2.5
NUDCD3Q8IVD9 MIR4263-201ENST00000584745 83 ntBASIC-0.59□□□□□ -2.5
NUDCD3Q8IVD9 AL137067.1-201ENST00000615933 120 ntBASIC-0.59□□□□□ -2.5
NUDCD3Q8IVD9 AC069503.3-201ENST00000618674 145 ntBASIC-0.59□□□□□ -2.5
NUDCD3Q8IVD9 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.6□□□□□ -2.51
NUDCD3Q8IVD9 MIR655-201ENST00000362159 97 ntBASIC-0.6□□□□□ -2.51
NUDCD3Q8IVD9 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.6□□□□□ -2.51
NUDCD3Q8IVD9 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.6□□□□□ -2.51
NUDCD3Q8IVD9 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.6□□□□□ -2.51
NUDCD3Q8IVD9 Y_RNA.350-201ENST00000365409 98 ntBASIC-0.6□□□□□ -2.51
NUDCD3Q8IVD9 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.6□□□□□ -2.51
NUDCD3Q8IVD9 Y_RNA.478-201ENST00000384358 107 ntBASIC-0.6□□□□□ -2.51
NUDCD3Q8IVD9 MIR617-201ENST00000385030 97 ntBASIC-0.6□□□□□ -2.51
NUDCD3Q8IVD9 AC093423.1-201ENST00000440817 142 ntBASIC-0.6□□□□□ -2.51
NUDCD3Q8IVD9 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.6□□□□□ -2.51
NUDCD3Q8IVD9 RNU6-1219P-201ENST00000516143 112 ntBASIC-0.6□□□□□ -2.51
NUDCD3Q8IVD9 Y_RNA.668-201ENST00000516233 93 ntBASIC-0.6□□□□□ -2.51
NUDCD3Q8IVD9 Y_RNA.686-201ENST00000516548 134 ntBASIC-0.6□□□□□ -2.51
NUDCD3Q8IVD9 AC087741.2-201ENST00000619415 172 ntBASIC-0.6□□□□□ -2.51
NUDCD3Q8IVD9 uc_338.10-201ENST00000621872 182 ntBASIC-0.6□□□□□ -2.51
NUDCD3Q8IVD9 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.61□□□□□ -2.51
NUDCD3Q8IVD9 RNA5SP205-201ENST00000364653 136 ntBASIC-0.61□□□□□ -2.51
NUDCD3Q8IVD9 SNORD115-44-201ENST00000365391 82 ntBASIC-0.61□□□□□ -2.51
NUDCD3Q8IVD9 Y_RNA.556-201ENST00000384677 113 ntBASIC-0.61□□□□□ -2.51
NUDCD3Q8IVD9 MIR516A2-201ENST00000384888 90 ntBASIC-0.61□□□□□ -2.51
NUDCD3Q8IVD9 MIR181B2-201ENST00000385004 89 ntBASIC-0.61□□□□□ -2.51
NUDCD3Q8IVD9 MIR516A1-201ENST00000385033 90 ntBASIC-0.61□□□□□ -2.51
NUDCD3Q8IVD9 Y_RNA.584-201ENST00000391090 114 ntBASIC-0.61□□□□□ -2.51
NUDCD3Q8IVD9 Y_RNA.680-201ENST00000516441 93 ntBASIC-0.61□□□□□ -2.51
NUDCD3Q8IVD9 AC108081.1-201ENST00000604358 221 ntBASIC-0.61□□□□□ -2.51
NUDCD3Q8IVD9 MIR3658-201ENST00000636291 56 ntBASIC-0.61□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 166.4 ms