Protein–RNA interactions for Protein: Q86VI4

LAPTM4B, Lysosomal-associated transmembrane protein 4B, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4BQ86VI4 AC103810.8-201ENST00000607347 118 ntBASIC2.56□□□□□ -2
LAPTM4BQ86VI4 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
LAPTM4BQ86VI4 RNU6-934P-201ENST00000365154 107 ntBASIC2.55□□□□□ -2
LAPTM4BQ86VI4 MIR9-1-201ENST00000385198 89 ntBASIC2.55□□□□□ -2
LAPTM4BQ86VI4 SNORD75.2-201ENST00000408784 58 ntBASIC2.55□□□□□ -2
LAPTM4BQ86VI4 RNU7-193P-201ENST00000516723 65 ntBASIC2.55□□□□□ -2
LAPTM4BQ86VI4 MIR4771-2-201ENST00000577758 74 ntBASIC2.55□□□□□ -2
LAPTM4BQ86VI4 MIR3162-201ENST00000581818 82 ntBASIC2.55□□□□□ -2
LAPTM4BQ86VI4 MIR4771-1-201ENST00000582617 74 ntBASIC2.55□□□□□ -2
LAPTM4BQ86VI4 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
LAPTM4BQ86VI4 AC016717.2-201ENST00000609089 5141 ntBASIC2.54□□□□□ -2
LAPTM4BQ86VI4 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
LAPTM4BQ86VI4 MIR26A1-201ENST00000362205 77 ntBASIC2.54□□□□□ -2
LAPTM4BQ86VI4 SNORA3A-201ENST00000364113 130 ntBASIC2.54□□□□□ -2
LAPTM4BQ86VI4 RNU6-1039P-201ENST00000383931 107 ntBASIC2.54□□□□□ -2
LAPTM4BQ86VI4 RNU6-936P-201ENST00000384005 107 ntBASIC2.54□□□□□ -2
LAPTM4BQ86VI4 MIR196B-201ENST00000384852 84 ntBASIC2.54□□□□□ -2
LAPTM4BQ86VI4 MIR125B2-201ENST00000385128 89 ntBASIC2.54□□□□□ -2
LAPTM4BQ86VI4 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC2.54□□□□□ -2
LAPTM4BQ86VI4 IGLVVI-22-1-201ENST00000521183 211 ntBASIC2.54□□□□□ -2
LAPTM4BQ86VI4 NAMPTP3-201ENST00000569273 224 ntBASIC2.54□□□□□ -2
LAPTM4BQ86VI4 MIR3670-2-201ENST00000582974 65 ntBASIC2.54□□□□□ -2
LAPTM4BQ86VI4 MIR3670-1-201ENST00000584160 65 ntBASIC2.54□□□□□ -2
LAPTM4BQ86VI4 MIR3670-3-201ENST00000584855 65 ntBASIC2.54□□□□□ -2
LAPTM4BQ86VI4 MIR3670-4-201ENST00000612260 65 ntBASIC2.54□□□□□ -2
LAPTM4BQ86VI4 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.53□□□□□ -2
LAPTM4BQ86VI4 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
LAPTM4BQ86VI4 RNA5SP276-201ENST00000362580 94 ntBASIC2.53□□□□□ -2
LAPTM4BQ86VI4 U8.2-201ENST00000363156 134 ntBASIC2.53□□□□□ -2
LAPTM4BQ86VI4 RNU6-808P-201ENST00000391233 108 ntBASIC2.53□□□□□ -2
LAPTM4BQ86VI4 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.53□□□□□ -2
LAPTM4BQ86VI4 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.53□□□□□ -2
LAPTM4BQ86VI4 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.53□□□□□ -2
LAPTM4BQ86VI4 MIR449A-201ENST00000362113 91 ntBASIC2.52□□□□□ -2.01
LAPTM4BQ86VI4 RNU6-859P-201ENST00000362728 107 ntBASIC2.52□□□□□ -2.01
LAPTM4BQ86VI4 RNU6-446P-201ENST00000362827 106 ntBASIC2.52□□□□□ -2.01
LAPTM4BQ86VI4 SCARNA21.1-201ENST00000515996 128 ntBASIC2.52□□□□□ -2.01
LAPTM4BQ86VI4 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
LAPTM4BQ86VI4 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.52□□□□□ -2.01
LAPTM4BQ86VI4 Y_RNA.330-201ENST00000365230 109 ntBASIC2.51□□□□□ -2.01
LAPTM4BQ86VI4 SNORD115-44-201ENST00000365391 82 ntBASIC2.51□□□□□ -2.01
LAPTM4BQ86VI4 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC2.51□□□□□ -2.01
LAPTM4BQ86VI4 AL645939.4-201ENST00000604495 135 ntBASIC2.51□□□□□ -2.01
LAPTM4BQ86VI4 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.51□□□□□ -2.01
LAPTM4BQ86VI4 AC073869.9-201ENST00000641610 120 ntBASIC2.51□□□□□ -2.01
LAPTM4BQ86VI4 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
LAPTM4BQ86VI4 RNU6-645P-201ENST00000364649 106 ntBASIC2.5□□□□□ -2.01
LAPTM4BQ86VI4 RNA5SP126-201ENST00000365092 109 ntBASIC2.5□□□□□ -2.01
LAPTM4BQ86VI4 RPL23AP42-201ENST00000471152 471 ntBASIC2.5□□□□□ -2.01
LAPTM4BQ86VI4 AC008608.1-201ENST00000603910 127 ntBASIC2.5□□□□□ -2.01
LAPTM4BQ86VI4 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
LAPTM4BQ86VI4 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
LAPTM4BQ86VI4 RNU6-495P-201ENST00000362995 107 ntBASIC2.49□□□□□ -2.01
LAPTM4BQ86VI4 RNA5SP68-201ENST00000363885 119 ntBASIC2.49□□□□□ -2.01
LAPTM4BQ86VI4 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
LAPTM4BQ86VI4 RNA5SP299-201ENST00000391203 116 ntBASIC2.49□□□□□ -2.01
LAPTM4BQ86VI4 RNU7-13P-201ENST00000516413 62 ntBASIC2.49□□□□□ -2.01
LAPTM4BQ86VI4 MIR4298-201ENST00000584380 73 ntBASIC2.49□□□□□ -2.01
LAPTM4BQ86VI4 MIR8063-201ENST00000621930 81 ntBASIC2.49□□□□□ -2.01
LAPTM4BQ86VI4 RNU6-364P-201ENST00000384387 107 ntBASIC2.48□□□□□ -2.01
LAPTM4BQ86VI4 RNU7-24P-201ENST00000458867 62 ntBASIC2.48□□□□□ -2.01
LAPTM4BQ86VI4 MIR4513-201ENST00000581077 86 ntBASIC2.48□□□□□ -2.01
LAPTM4BQ86VI4 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
LAPTM4BQ86VI4 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
LAPTM4BQ86VI4 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.47□□□□□ -2.01
LAPTM4BQ86VI4 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
LAPTM4BQ86VI4 SNORD113.3-201ENST00000364630 78 ntBASIC2.47□□□□□ -2.01
LAPTM4BQ86VI4 DEFA7P-201ENST00000382676 285 ntBASIC2.47□□□□□ -2.01
LAPTM4BQ86VI4 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
LAPTM4BQ86VI4 RNA5SP492-201ENST00000411330 114 ntBASIC2.47□□□□□ -2.01
LAPTM4BQ86VI4 RNU1-41P-201ENST00000516161 162 ntBASIC2.47□□□□□ -2.01
LAPTM4BQ86VI4 RNU1-48P-201ENST00000516400 162 ntBASIC2.47□□□□□ -2.01
LAPTM4BQ86VI4 SNORA77B-201ENST00000578179 125 ntBASIC2.47□□□□□ -2.01
LAPTM4BQ86VI4 MIR4635-201ENST00000583759 79 ntBASIC2.47□□□□□ -2.01
LAPTM4BQ86VI4 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
LAPTM4BQ86VI4 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.47□□□□□ -2.01
LAPTM4BQ86VI4 RNU6-1184P-201ENST00000384588 108 ntBASIC2.46□□□□□ -2.02
LAPTM4BQ86VI4 RNA5SP148-201ENST00000516527 94 ntBASIC2.46□□□□□ -2.02
LAPTM4BQ86VI4 MIR3664-201ENST00000579074 99 ntBASIC2.46□□□□□ -2.02
LAPTM4BQ86VI4 MIR6817-201ENST00000615588 66 ntBASIC2.46□□□□□ -2.02
LAPTM4BQ86VI4 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.46□□□□□ -2.02
LAPTM4BQ86VI4 RNA5SP117-201ENST00000365294 118 ntBASIC2.45□□□□□ -2.02
LAPTM4BQ86VI4 AC244505.6-201ENST00000452829 130 ntBASIC2.45□□□□□ -2.02
LAPTM4BQ86VI4 MIR3657-201ENST00000584818 117 ntBASIC2.45□□□□□ -2.02
LAPTM4BQ86VI4 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
LAPTM4BQ86VI4 SNORD113-4-201ENST00000364802 75 ntBASIC2.44□□□□□ -2.02
LAPTM4BQ86VI4 SNORA67.3-201ENST00000384366 140 ntBASIC2.44□□□□□ -2.02
LAPTM4BQ86VI4 RNA5SP212-201ENST00000391223 107 ntBASIC2.44□□□□□ -2.02
LAPTM4BQ86VI4 AL359851.1-201ENST00000569460 4997 ntBASIC2.43□□□□□ -2.02
LAPTM4BQ86VI4 AL513328.1-201ENST00000446460 224 ntBASIC2.43□□□□□ -2.02
LAPTM4BQ86VI4 RNA5SP282-201ENST00000516355 108 ntBASIC2.43□□□□□ -2.02
LAPTM4BQ86VI4 MIR548AG2-201ENST00000581228 64 ntBASIC2.43□□□□□ -2.02
LAPTM4BQ86VI4 MIR4676-201ENST00000583078 72 ntBASIC2.43□□□□□ -2.02
LAPTM4BQ86VI4 AC010297.1-201ENST00000623948 149 ntBASIC2.43□□□□□ -2.02
LAPTM4BQ86VI4 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
LAPTM4BQ86VI4 AC080100.1-201ENST00000624239 5356 ntBASIC2.42□□□□□ -2.02
LAPTM4BQ86VI4 MIR6073-201ENST00000352083 89 ntBASIC2.42□□□□□ -2.02
LAPTM4BQ86VI4 RNU1-52P-201ENST00000384190 164 ntBASIC2.42□□□□□ -2.02
LAPTM4BQ86VI4 AL359511.1-201ENST00000402970 211 ntBASIC2.42□□□□□ -2.02
LAPTM4BQ86VI4 AC019176.1-201ENST00000518519 225 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 185.7 ms