Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 RNA5SP94-201ENST00000516917 108 ntBASIC0.62□□□□□ -2.31
SYNE3Q6ZMZ3 MIR3678-201ENST00000578455 94 ntBASIC0.62□□□□□ -2.31
SYNE3Q6ZMZ3 RNA5SP347-201ENST00000362445 119 ntBASIC0.61□□□□□ -2.31
SYNE3Q6ZMZ3 Y_RNA.56-201ENST00000362798 112 ntBASIC0.61□□□□□ -2.31
SYNE3Q6ZMZ3 SNORD18A-201ENST00000363753 72 ntBASIC0.61□□□□□ -2.31
SYNE3Q6ZMZ3 RNU6-81P-201ENST00000365608 104 ntBASIC0.61□□□□□ -2.31
SYNE3Q6ZMZ3 RNU6-945P-201ENST00000383947 107 ntBASIC0.61□□□□□ -2.31
SYNE3Q6ZMZ3 SNORA36.2-201ENST00000384004 127 ntBASIC0.61□□□□□ -2.31
SYNE3Q6ZMZ3 RNU6-535P-201ENST00000384722 107 ntBASIC0.61□□□□□ -2.31
SYNE3Q6ZMZ3 RNU7-107P-201ENST00000459121 61 ntBASIC0.61□□□□□ -2.31
SYNE3Q6ZMZ3 RNA5SP121-201ENST00000516537 101 ntBASIC0.61□□□□□ -2.31
SYNE3Q6ZMZ3 MIR376B-201ENST00000614515 100 ntBASIC0.61□□□□□ -2.31
SYNE3Q6ZMZ3 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
SYNE3Q6ZMZ3 AL157777.2-201ENST00000258070 137 ntBASIC0.6□□□□□ -2.31
SYNE3Q6ZMZ3 RNY4P6-201ENST00000363667 96 ntBASIC0.6□□□□□ -2.31
SYNE3Q6ZMZ3 MIR7-2-201ENST00000384970 110 ntBASIC0.6□□□□□ -2.31
SYNE3Q6ZMZ3 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.6□□□□□ -2.31
SYNE3Q6ZMZ3 DEFB131E-201ENST00000532329 154 ntBASIC0.6□□□□□ -2.31
SYNE3Q6ZMZ3 MIR4679-2-201ENST00000578358 77 ntBASIC0.6□□□□□ -2.31
SYNE3Q6ZMZ3 RN7SL793P-201ENST00000583259 296 ntBASIC0.6□□□□□ -2.31
SYNE3Q6ZMZ3 MIR1255B1-201ENST00000636325 63 ntBASIC0.6□□□□□ -2.31
SYNE3Q6ZMZ3 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.6□□□□□ -2.31
SYNE3Q6ZMZ3 SNORD116-14-201ENST00000383894 92 ntBASIC0.59□□□□□ -2.31
SYNE3Q6ZMZ3 SNORD116-17-201ENST00000383929 92 ntBASIC0.59□□□□□ -2.31
SYNE3Q6ZMZ3 SNORD116-15-201ENST00000384445 92 ntBASIC0.59□□□□□ -2.31
SYNE3Q6ZMZ3 SNORD116-19-201ENST00000384729 92 ntBASIC0.59□□□□□ -2.31
SYNE3Q6ZMZ3 AC244505.6-201ENST00000452829 130 ntBASIC0.59□□□□□ -2.31
SYNE3Q6ZMZ3 AL157398.1-201ENST00000452981 186 ntBASIC0.59□□□□□ -2.31
SYNE3Q6ZMZ3 MIR6828-201ENST00000636181 60 ntBASIC0.59□□□□□ -2.31
SYNE3Q6ZMZ3 Y_RNA.71-201ENST00000362892 104 ntBASIC0.58□□□□□ -2.32
SYNE3Q6ZMZ3 RNU6-363P-201ENST00000362895 105 ntBASIC0.58□□□□□ -2.32
SYNE3Q6ZMZ3 RNU6-865P-201ENST00000364772 107 ntBASIC0.58□□□□□ -2.32
SYNE3Q6ZMZ3 Y_RNA.344-201ENST00000365381 112 ntBASIC0.58□□□□□ -2.32
SYNE3Q6ZMZ3 Y_RNA.563-201ENST00000384707 108 ntBASIC0.58□□□□□ -2.32
SYNE3Q6ZMZ3 AC092628.1-201ENST00000436250 252 ntBASIC0.58□□□□□ -2.32
SYNE3Q6ZMZ3 RNU6-469P-201ENST00000516253 101 ntBASIC0.58□□□□□ -2.32
SYNE3Q6ZMZ3 RNU4-54P-201ENST00000516428 129 ntBASIC0.58□□□□□ -2.32
SYNE3Q6ZMZ3 RNY1P4-201ENST00000384595 115 ntBASIC0.57□□□□□ -2.32
SYNE3Q6ZMZ3 MIR519A1-201ENST00000385257 85 ntBASIC0.57□□□□□ -2.32
SYNE3Q6ZMZ3 MIR548I2-201ENST00000408348 149 ntBASIC0.57□□□□□ -2.32
SYNE3Q6ZMZ3 SUMO1P3-201ENST00000439961 304 ntBASIC0.57□□□□□ -2.32
SYNE3Q6ZMZ3 AL353813.1-201ENST00000440700 253 ntBASIC0.57□□□□□ -2.32
SYNE3Q6ZMZ3 RNU6-521P-201ENST00000516663 105 ntBASIC0.57□□□□□ -2.32
SYNE3Q6ZMZ3 MIR4639-201ENST00000584938 69 ntBASIC0.57□□□□□ -2.32
SYNE3Q6ZMZ3 U6.95-201ENST00000636931 70 ntBASIC0.57□□□□□ -2.32
SYNE3Q6ZMZ3 MIR101-2-201ENST00000362195 79 ntBASIC0.56□□□□□ -2.32
SYNE3Q6ZMZ3 RNU6-1313P-201ENST00000362622 102 ntBASIC0.56□□□□□ -2.32
SYNE3Q6ZMZ3 SNORA36.1-201ENST00000363424 132 ntBASIC0.56□□□□□ -2.32
SYNE3Q6ZMZ3 RNU4-67P-201ENST00000364569 141 ntBASIC0.56□□□□□ -2.32
SYNE3Q6ZMZ3 Y_RNA.360-201ENST00000365512 102 ntBASIC0.56□□□□□ -2.32
SYNE3Q6ZMZ3 RNU6-959P-201ENST00000384671 107 ntBASIC0.56□□□□□ -2.32
SYNE3Q6ZMZ3 MIR34C-201ENST00000384831 77 ntBASIC0.56□□□□□ -2.32
SYNE3Q6ZMZ3 MIR644A-201ENST00000385262 94 ntBASIC0.56□□□□□ -2.32
SYNE3Q6ZMZ3 AC114737.2-201ENST00000421583 173 ntBASIC0.56□□□□□ -2.32
SYNE3Q6ZMZ3 TMSB4XP3-201ENST00000445144 114 ntBASIC0.56□□□□□ -2.32
SYNE3Q6ZMZ3 SNRPGP12-201ENST00000449481 213 ntBASIC0.56□□□□□ -2.32
SYNE3Q6ZMZ3 RNU6-1018P-201ENST00000516577 106 ntBASIC0.56□□□□□ -2.32
SYNE3Q6ZMZ3 RNU6-229P-201ENST00000516614 102 ntBASIC0.56□□□□□ -2.32
SYNE3Q6ZMZ3 RNA5SP47-201ENST00000517230 109 ntBASIC0.56□□□□□ -2.32
SYNE3Q6ZMZ3 MIR548H5-201ENST00000580314 60 ntBASIC0.56□□□□□ -2.32
SYNE3Q6ZMZ3 RNU7-10P-201ENST00000607194 63 ntBASIC0.56□□□□□ -2.32
SYNE3Q6ZMZ3 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.56□□□□□ -2.32
SYNE3Q6ZMZ3 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.56□□□□□ -2.32
SYNE3Q6ZMZ3 RNA5SP245-201ENST00000364239 121 ntBASIC0.55□□□□□ -2.32
SYNE3Q6ZMZ3 RNA5SP517-201ENST00000364724 117 ntBASIC0.55□□□□□ -2.32
SYNE3Q6ZMZ3 Y_RNA.362-201ENST00000365518 110 ntBASIC0.55□□□□□ -2.32
SYNE3Q6ZMZ3 RNU6-571P-201ENST00000384128 107 ntBASIC0.55□□□□□ -2.32
SYNE3Q6ZMZ3 Y_RNA.525-201ENST00000384570 113 ntBASIC0.55□□□□□ -2.32
SYNE3Q6ZMZ3 SNORD28-201ENST00000384706 75 ntBASIC0.55□□□□□ -2.32
SYNE3Q6ZMZ3 MIR936-201ENST00000401264 98 ntBASIC0.55□□□□□ -2.32
SYNE3Q6ZMZ3 RNU6-1006P-201ENST00000516998 103 ntBASIC0.55□□□□□ -2.32
SYNE3Q6ZMZ3 AC092634.7-201ENST00000621022 103 ntBASIC0.55□□□□□ -2.32
SYNE3Q6ZMZ3 Y_RNA.85-201ENST00000363014 111 ntBASIC0.54□□□□□ -2.32
SYNE3Q6ZMZ3 SNORD118-201ENST00000363593 134 ntBASIC0.54□□□□□ -2.32
SYNE3Q6ZMZ3 SNORA8.2-201ENST00000384372 139 ntBASIC0.54□□□□□ -2.32
SYNE3Q6ZMZ3 AC098934.3-201ENST00000430450 190 ntBASIC0.54□□□□□ -2.32
SYNE3Q6ZMZ3 RPL39P34-201ENST00000477141 156 ntBASIC0.54□□□□□ -2.32
SYNE3Q6ZMZ3 SCARNA16.5-201ENST00000517114 183 ntBASIC0.54□□□□□ -2.32
SYNE3Q6ZMZ3 AC138869.1-201ENST00000568623 124 ntBASIC0.54□□□□□ -2.32
SYNE3Q6ZMZ3 MIR5087-201ENST00000635826 76 ntBASIC0.54□□□□□ -2.32
SYNE3Q6ZMZ3 SNORD114-23-201ENST00000363536 72 ntBASIC0.53□□□□□ -2.32
SYNE3Q6ZMZ3 SNORA63.5-201ENST00000363548 123 ntBASIC0.53□□□□□ -2.32
SYNE3Q6ZMZ3 Y_RNA.353-201ENST00000365440 108 ntBASIC0.53□□□□□ -2.32
SYNE3Q6ZMZ3 Y_RNA.567-201ENST00000384736 106 ntBASIC0.53□□□□□ -2.32
SYNE3Q6ZMZ3 RNU6-679P-201ENST00000391003 106 ntBASIC0.53□□□□□ -2.32
SYNE3Q6ZMZ3 AL603908.1-201ENST00000406098 201 ntBASIC0.53□□□□□ -2.32
SYNE3Q6ZMZ3 SNORA40.8-201ENST00000411034 126 ntBASIC0.53□□□□□ -2.32
SYNE3Q6ZMZ3 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.53□□□□□ -2.32
SYNE3Q6ZMZ3 AL162726.3-218ENST00000636401 95 ntBASIC0.53□□□□□ -2.32
SYNE3Q6ZMZ3 MIR518A1-201ENST00000385068 85 ntBASIC0.52□□□□□ -2.33
SYNE3Q6ZMZ3 MIR1912-201ENST00000410389 80 ntBASIC0.52□□□□□ -2.33
SYNE3Q6ZMZ3 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.52□□□□□ -2.33
SYNE3Q6ZMZ3 SNORD33.1-201ENST00000516213 88 ntBASIC0.52□□□□□ -2.33
SYNE3Q6ZMZ3 MIR4711-201ENST00000578274 70 ntBASIC0.52□□□□□ -2.33
SYNE3Q6ZMZ3 MIR4500-201ENST00000579472 76 ntBASIC0.52□□□□□ -2.33
SYNE3Q6ZMZ3 SNORD113-1-201ENST00000365321 69 ntBASIC0.51□□□□□ -2.33
SYNE3Q6ZMZ3 RNA5SP193-201ENST00000410353 107 ntBASIC0.51□□□□□ -2.33
SYNE3Q6ZMZ3 AC097635.1-201ENST00000450678 155 ntBASIC0.51□□□□□ -2.33
SYNE3Q6ZMZ3 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.51□□□□□ -2.33
SYNE3Q6ZMZ3 MIR6779-201ENST00000617283 64 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 230.5 ms