Protein–RNA interactions for Protein: Q6Q0C0

TRAF7, E3 ubiquitin-protein ligase TRAF7, humanhuman

Predictions only

Length 670 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF7Q6Q0C0 Y_RNA.588-201ENST00000391254 102 ntBASIC2.81□□□□□ -1.96
TRAF7Q6Q0C0 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.81□□□□□ -1.96
TRAF7Q6Q0C0 ZNF355P-201ENST00000427301 3216 ntBASIC2.81□□□□□ -1.96
TRAF7Q6Q0C0 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
TRAF7Q6Q0C0 RNU4-53P-201ENST00000410828 140 ntBASIC2.8□□□□□ -1.96
TRAF7Q6Q0C0 AC009474.2-201ENST00000451383 136 ntBASIC2.8□□□□□ -1.96
TRAF7Q6Q0C0 snoU13.15-201ENST00000459407 104 ntBASIC2.8□□□□□ -1.96
TRAF7Q6Q0C0 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
TRAF7Q6Q0C0 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.79□□□□□ -1.96
TRAF7Q6Q0C0 U8.2-201ENST00000363156 134 ntBASIC2.79□□□□□ -1.96
TRAF7Q6Q0C0 RNA5SP100-201ENST00000410903 110 ntBASIC2.79□□□□□ -1.96
TRAF7Q6Q0C0 RNA5SP59-201ENST00000410922 110 ntBASIC2.79□□□□□ -1.96
TRAF7Q6Q0C0 snoU13.26-201ENST00000459452 105 ntBASIC2.79□□□□□ -1.96
TRAF7Q6Q0C0 AC025033.1-201ENST00000463883 194 ntBASIC2.79□□□□□ -1.96
TRAF7Q6Q0C0 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.79□□□□□ -1.96
TRAF7Q6Q0C0 MIR548H5-201ENST00000580314 60 ntBASIC2.79□□□□□ -1.96
TRAF7Q6Q0C0 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.79□□□□□ -1.96
TRAF7Q6Q0C0 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.79□□□□□ -1.96
TRAF7Q6Q0C0 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.78□□□□□ -1.96
TRAF7Q6Q0C0 SNORA25.3-201ENST00000363205 127 ntBASIC2.78□□□□□ -1.96
TRAF7Q6Q0C0 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
TRAF7Q6Q0C0 RNA5SP450-201ENST00000411206 102 ntBASIC2.78□□□□□ -1.96
TRAF7Q6Q0C0 RNU7-41P-201ENST00000515917 61 ntBASIC2.78□□□□□ -1.96
TRAF7Q6Q0C0 RNU6-231P-201ENST00000517122 103 ntBASIC2.78□□□□□ -1.96
TRAF7Q6Q0C0 AC013244.2-201ENST00000603396 103 ntBASIC2.78□□□□□ -1.96
TRAF7Q6Q0C0 RNU6-53P-201ENST00000365367 106 ntBASIC2.77□□□□□ -1.97
TRAF7Q6Q0C0 RNU6-260P-201ENST00000384092 107 ntBASIC2.77□□□□□ -1.97
TRAF7Q6Q0C0 RNU6-1165P-201ENST00000410119 107 ntBASIC2.77□□□□□ -1.97
TRAF7Q6Q0C0 RNU6-237P-201ENST00000515985 71 ntBASIC2.77□□□□□ -1.97
TRAF7Q6Q0C0 RNU6-322P-201ENST00000516010 103 ntBASIC2.77□□□□□ -1.97
TRAF7Q6Q0C0 SNORA31.17-201ENST00000516953 127 ntBASIC2.77□□□□□ -1.97
TRAF7Q6Q0C0 SNORA40.16-201ENST00000517238 121 ntBASIC2.77□□□□□ -1.97
TRAF7Q6Q0C0 SNORA31.25-201ENST00000517242 134 ntBASIC2.77□□□□□ -1.97
TRAF7Q6Q0C0 RNU7-10P-201ENST00000607194 63 ntBASIC2.77□□□□□ -1.97
TRAF7Q6Q0C0 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
TRAF7Q6Q0C0 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
TRAF7Q6Q0C0 MIR101-2-201ENST00000362195 79 ntBASIC2.76□□□□□ -1.97
TRAF7Q6Q0C0 RNU6-54P-201ENST00000365563 107 ntBASIC2.76□□□□□ -1.97
TRAF7Q6Q0C0 RN7SKP223-201ENST00000410582 62 ntBASIC2.76□□□□□ -1.97
TRAF7Q6Q0C0 RNU6-1265P-201ENST00000516342 103 ntBASIC2.76□□□□□ -1.97
TRAF7Q6Q0C0 SNORA40.17-201ENST00000517256 115 ntBASIC2.76□□□□□ -1.97
TRAF7Q6Q0C0 uc_338.6-201ENST00000613544 171 ntBASIC2.76□□□□□ -1.97
TRAF7Q6Q0C0 MIR7843-201ENST00000622274 79 ntBASIC2.76□□□□□ -1.97
TRAF7Q6Q0C0 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.76□□□□□ -1.97
TRAF7Q6Q0C0 U6.103-201ENST00000637085 61 ntBASIC2.76□□□□□ -1.97
TRAF7Q6Q0C0 VTRNA1-1-201ENST00000363120 99 ntBASIC2.75□□□□□ -1.97
TRAF7Q6Q0C0 SNORD114-30-201ENST00000364448 72 ntBASIC2.75□□□□□ -1.97
TRAF7Q6Q0C0 AL359511.1-201ENST00000402970 211 ntBASIC2.75□□□□□ -1.97
TRAF7Q6Q0C0 MIR1302-7-201ENST00000408841 72 ntBASIC2.75□□□□□ -1.97
TRAF7Q6Q0C0 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC2.75□□□□□ -1.97
TRAF7Q6Q0C0 RNU6-287P-201ENST00000516230 98 ntBASIC2.75□□□□□ -1.97
TRAF7Q6Q0C0 MIR6739-201ENST00000622461 75 ntBASIC2.75□□□□□ -1.97
TRAF7Q6Q0C0 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.75□□□□□ -1.97
TRAF7Q6Q0C0 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
TRAF7Q6Q0C0 Y_RNA.56-201ENST00000362798 112 ntBASIC2.74□□□□□ -1.97
TRAF7Q6Q0C0 RNU1-52P-201ENST00000384190 164 ntBASIC2.74□□□□□ -1.97
TRAF7Q6Q0C0 SNORD113-2-201ENST00000391082 72 ntBASIC2.74□□□□□ -1.97
TRAF7Q6Q0C0 U4.4-201ENST00000620626 117 ntBASIC2.74□□□□□ -1.97
TRAF7Q6Q0C0 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
TRAF7Q6Q0C0 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.74□□□□□ -1.97
TRAF7Q6Q0C0 MAPK10-266ENST00000641066 6555 ntBASIC2.74□□□□□ -1.97
TRAF7Q6Q0C0 SNORA3A-201ENST00000364113 130 ntBASIC2.73□□□□□ -1.97
TRAF7Q6Q0C0 SNORA41B-201ENST00000384785 128 ntBASIC2.73□□□□□ -1.97
TRAF7Q6Q0C0 MIR7-2-201ENST00000384970 110 ntBASIC2.73□□□□□ -1.97
TRAF7Q6Q0C0 RNU6-696P-201ENST00000390834 107 ntBASIC2.73□□□□□ -1.97
TRAF7Q6Q0C0 MIR514B-201ENST00000516774 80 ntBASIC2.73□□□□□ -1.97
TRAF7Q6Q0C0 DEFB122-202ENST00000569013 197 ntBASIC2.73□□□□□ -1.97
TRAF7Q6Q0C0 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.73□□□□□ -1.97
TRAF7Q6Q0C0 Evf-2_5p.1-201ENST00000614213 142 ntBASIC2.73□□□□□ -1.97
TRAF7Q6Q0C0 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.73□□□□□ -1.97
TRAF7Q6Q0C0 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
TRAF7Q6Q0C0 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
TRAF7Q6Q0C0 MIR504-201ENST00000385065 83 ntBASIC2.72□□□□□ -1.97
TRAF7Q6Q0C0 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.72□□□□□ -1.97
TRAF7Q6Q0C0 AC097635.1-201ENST00000450678 155 ntBASIC2.72□□□□□ -1.97
TRAF7Q6Q0C0 MIR4648-201ENST00000580107 72 ntBASIC2.72□□□□□ -1.97
TRAF7Q6Q0C0 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
TRAF7Q6Q0C0 AC016717.2-201ENST00000609089 5141 ntBASIC2.71□□□□□ -1.97
TRAF7Q6Q0C0 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
TRAF7Q6Q0C0 RNU6-247P-201ENST00000362636 107 ntBASIC2.71□□□□□ -1.98
TRAF7Q6Q0C0 RNU6-698P-201ENST00000363523 107 ntBASIC2.71□□□□□ -1.98
TRAF7Q6Q0C0 RNU6-34P-201ENST00000364874 107 ntBASIC2.71□□□□□ -1.98
TRAF7Q6Q0C0 MT-TF-201ENST00000387314 71 ntBASIC2.71□□□□□ -1.98
TRAF7Q6Q0C0 SNORD116.2-201ENST00000391251 93 ntBASIC2.71□□□□□ -1.98
TRAF7Q6Q0C0 RNA5SP425-201ENST00000410336 112 ntBASIC2.71□□□□□ -1.98
TRAF7Q6Q0C0 RNU7-193P-201ENST00000516723 65 ntBASIC2.71□□□□□ -1.98
TRAF7Q6Q0C0 AP000942.3-201ENST00000603702 160 ntBASIC2.71□□□□□ -1.98
TRAF7Q6Q0C0 AC046143.2-201ENST00000609789 160 ntBASIC2.71□□□□□ -1.98
TRAF7Q6Q0C0 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
TRAF7Q6Q0C0 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
TRAF7Q6Q0C0 RNU6-403P-201ENST00000363163 104 ntBASIC2.7□□□□□ -1.98
TRAF7Q6Q0C0 MIR548C-201ENST00000384815 97 ntBASIC2.7□□□□□ -1.98
TRAF7Q6Q0C0 MIR599-201ENST00000385069 95 ntBASIC2.7□□□□□ -1.98
TRAF7Q6Q0C0 SNORD93-201ENST00000408813 74 ntBASIC2.7□□□□□ -1.98
TRAF7Q6Q0C0 AC004965.1-201ENST00000413033 213 ntBASIC2.7□□□□□ -1.98
TRAF7Q6Q0C0 AL157398.1-201ENST00000452981 186 ntBASIC2.7□□□□□ -1.98
TRAF7Q6Q0C0 RNU7-174P-201ENST00000516248 59 ntBASIC2.7□□□□□ -1.98
TRAF7Q6Q0C0 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
TRAF7Q6Q0C0 SNORA2.1-201ENST00000363089 137 ntBASIC2.69□□□□□ -1.98
TRAF7Q6Q0C0 RNA5SP456-201ENST00000364002 114 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 303.3 ms