Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 Y_RNA.565-201ENST00000384719 101 ntBASIC1.81□□□□□ -2.12
CNKSR3Q6P9H4 RNU6-129P-201ENST00000391022 107 ntBASIC1.81□□□□□ -2.12
CNKSR3Q6P9H4 uc_338.20-201ENST00000621563 178 ntBASIC1.81□□□□□ -2.12
CNKSR3Q6P9H4 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CNKSR3Q6P9H4 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CNKSR3Q6P9H4 RNU6-315P-201ENST00000362666 107 ntBASIC1.8□□□□□ -2.12
CNKSR3Q6P9H4 Y_RNA.355-201ENST00000365462 98 ntBASIC1.8□□□□□ -2.12
CNKSR3Q6P9H4 SNORA4-201ENST00000584302 138 ntBASIC1.8□□□□□ -2.12
CNKSR3Q6P9H4 AL645939.4-201ENST00000604495 135 ntBASIC1.8□□□□□ -2.12
CNKSR3Q6P9H4 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.8□□□□□ -2.12
CNKSR3Q6P9H4 RNU6-571P-201ENST00000384128 107 ntBASIC1.79□□□□□ -2.12
CNKSR3Q6P9H4 RNU6-205P-201ENST00000390858 107 ntBASIC1.79□□□□□ -2.12
CNKSR3Q6P9H4 MIR934-201ENST00000401241 83 ntBASIC1.79□□□□□ -2.12
CNKSR3Q6P9H4 RNU6-1165P-201ENST00000410119 107 ntBASIC1.79□□□□□ -2.12
CNKSR3Q6P9H4 snoU13.11-201ENST00000459219 104 ntBASIC1.79□□□□□ -2.12
CNKSR3Q6P9H4 Y_RNA.648-201ENST00000459455 110 ntBASIC1.79□□□□□ -2.12
CNKSR3Q6P9H4 AC023790.1-201ENST00000482174 347 ntBASIC1.79□□□□□ -2.12
CNKSR3Q6P9H4 Y_RNA.788-201ENST00000622394 112 ntBASIC1.79□□□□□ -2.12
CNKSR3Q6P9H4 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.79□□□□□ -2.12
CNKSR3Q6P9H4 AC008163.1-202ENST00000636004 2889 ntBASIC1.79□□□□□ -2.12
CNKSR3Q6P9H4 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.78□□□□□ -2.12
CNKSR3Q6P9H4 SNORD33-201ENST00000362761 85 ntBASIC1.78□□□□□ -2.12
CNKSR3Q6P9H4 SNORD36A-201ENST00000362874 73 ntBASIC1.78□□□□□ -2.12
CNKSR3Q6P9H4 RNU1-42P-201ENST00000364033 160 ntBASIC1.78□□□□□ -2.12
CNKSR3Q6P9H4 Y_RNA.327-201ENST00000365201 102 ntBASIC1.78□□□□□ -2.12
CNKSR3Q6P9H4 RNU6-396P-201ENST00000365369 105 ntBASIC1.78□□□□□ -2.12
CNKSR3Q6P9H4 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.78□□□□□ -2.12
CNKSR3Q6P9H4 AP003716.2-201ENST00000528260 108 ntBASIC1.78□□□□□ -2.12
CNKSR3Q6P9H4 AC015688.6-201ENST00000577737 104 ntBASIC1.78□□□□□ -2.12
CNKSR3Q6P9H4 MIR4264-201ENST00000583520 66 ntBASIC1.78□□□□□ -2.12
CNKSR3Q6P9H4 MIR516A2-201ENST00000384888 90 ntBASIC1.77□□□□□ -2.13
CNKSR3Q6P9H4 MIR516A1-201ENST00000385033 90 ntBASIC1.77□□□□□ -2.13
CNKSR3Q6P9H4 MIR518E-201ENST00000385252 88 ntBASIC1.77□□□□□ -2.13
CNKSR3Q6P9H4 RNA5SP338-201ENST00000410495 85 ntBASIC1.77□□□□□ -2.13
CNKSR3Q6P9H4 AC245517.4-201ENST00000448601 281 ntBASIC1.77□□□□□ -2.13
CNKSR3Q6P9H4 RNA5SP364-201ENST00000516938 78 ntBASIC1.77□□□□□ -2.13
CNKSR3Q6P9H4 AC012493.3-201ENST00000604494 112 ntBASIC1.77□□□□□ -2.13
CNKSR3Q6P9H4 MIR6516-201ENST00000630554 81 ntBASIC1.77□□□□□ -2.13
CNKSR3Q6P9H4 RNU6-392P-201ENST00000364926 101 ntBASIC1.76□□□□□ -2.13
CNKSR3Q6P9H4 RNA5SP292-201ENST00000390974 118 ntBASIC1.76□□□□□ -2.13
CNKSR3Q6P9H4 MIR1185-1-201ENST00000408598 86 ntBASIC1.76□□□□□ -2.13
CNKSR3Q6P9H4 RNU7-62P-201ENST00000458856 62 ntBASIC1.76□□□□□ -2.13
CNKSR3Q6P9H4 AC079140.2-201ENST00000506193 142 ntBASIC1.76□□□□□ -2.13
CNKSR3Q6P9H4 MIR4422-201ENST00000581938 83 ntBASIC1.76□□□□□ -2.13
CNKSR3Q6P9H4 GHRLOS.1-201ENST00000610995 70 ntBASIC1.76□□□□□ -2.13
CNKSR3Q6P9H4 U7.4-201ENST00000614961 63 ntBASIC1.76□□□□□ -2.13
CNKSR3Q6P9H4 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.76□□□□□ -2.13
CNKSR3Q6P9H4 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
CNKSR3Q6P9H4 SNORD1A-201ENST00000364968 72 ntBASIC1.75□□□□□ -2.13
CNKSR3Q6P9H4 MT-TN-201ENST00000387400 73 ntBASIC1.75□□□□□ -2.13
CNKSR3Q6P9H4 AC004223.1-201ENST00000479840 271 ntBASIC1.75□□□□□ -2.13
CNKSR3Q6P9H4 RN7SL274P-201ENST00000492268 272 ntBASIC1.75□□□□□ -2.13
CNKSR3Q6P9H4 RNU6-75P-201ENST00000515944 104 ntBASIC1.75□□□□□ -2.13
CNKSR3Q6P9H4 RNU6-523P-201ENST00000516304 54 ntBASIC1.75□□□□□ -2.13
CNKSR3Q6P9H4 MIR4796-201ENST00000580742 81 ntBASIC1.75□□□□□ -2.13
CNKSR3Q6P9H4 AL357312.1-201ENST00000603879 298 ntBASIC1.75□□□□□ -2.13
CNKSR3Q6P9H4 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.75□□□□□ -2.13
CNKSR3Q6P9H4 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.75□□□□□ -2.13
CNKSR3Q6P9H4 SNORA63.2-201ENST00000362603 126 ntBASIC1.74□□□□□ -2.13
CNKSR3Q6P9H4 RNU6-654P-201ENST00000364373 107 ntBASIC1.74□□□□□ -2.13
CNKSR3Q6P9H4 SNORA72.6-201ENST00000384520 129 ntBASIC1.74□□□□□ -2.13
CNKSR3Q6P9H4 SNORA67.6-201ENST00000391093 99 ntBASIC1.74□□□□□ -2.13
CNKSR3Q6P9H4 RNU1-78P-201ENST00000391248 165 ntBASIC1.74□□□□□ -2.13
CNKSR3Q6P9H4 RNU7-106P-201ENST00000459514 67 ntBASIC1.74□□□□□ -2.13
CNKSR3Q6P9H4 RPL30P7-201ENST00000479312 323 ntBASIC1.74□□□□□ -2.13
CNKSR3Q6P9H4 RNU6-947P-201ENST00000516264 106 ntBASIC1.74□□□□□ -2.13
CNKSR3Q6P9H4 RNU6-557P-201ENST00000516842 110 ntBASIC1.74□□□□□ -2.13
CNKSR3Q6P9H4 MIR4491-201ENST00000581087 68 ntBASIC1.74□□□□□ -2.13
CNKSR3Q6P9H4 AL161722.3-201ENST00000605789 2983 ntBASIC1.74□□□□□ -2.13
CNKSR3Q6P9H4 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.73□□□□□ -2.13
CNKSR3Q6P9H4 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.73□□□□□ -2.13
CNKSR3Q6P9H4 MIRLET7A1-201ENST00000362295 80 ntBASIC1.73□□□□□ -2.13
CNKSR3Q6P9H4 RNU6-132P-201ENST00000383863 107 ntBASIC1.73□□□□□ -2.13
CNKSR3Q6P9H4 RNU6-788P-201ENST00000390967 104 ntBASIC1.73□□□□□ -2.13
CNKSR3Q6P9H4 Y_RNA.588-201ENST00000391254 102 ntBASIC1.73□□□□□ -2.13
CNKSR3Q6P9H4 RNA5SP95-201ENST00000410319 137 ntBASIC1.73□□□□□ -2.13
CNKSR3Q6P9H4 SCARNA18B-201ENST00000458806 135 ntBASIC1.73□□□□□ -2.13
CNKSR3Q6P9H4 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.73□□□□□ -2.13
CNKSR3Q6P9H4 MIR2115-201ENST00000516657 100 ntBASIC1.73□□□□□ -2.13
CNKSR3Q6P9H4 RNU6-531P-201ENST00000516694 104 ntBASIC1.73□□□□□ -2.13
CNKSR3Q6P9H4 SNORA25.16-201ENST00000516741 121 ntBASIC1.73□□□□□ -2.13
CNKSR3Q6P9H4 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
CNKSR3Q6P9H4 MIR302D-201ENST00000362275 68 ntBASIC1.72□□□□□ -2.13
CNKSR3Q6P9H4 RNU6-1094P-201ENST00000362416 104 ntBASIC1.72□□□□□ -2.13
CNKSR3Q6P9H4 SNORA7.1-201ENST00000363750 139 ntBASIC1.72□□□□□ -2.13
CNKSR3Q6P9H4 RNU6-811P-201ENST00000384069 107 ntBASIC1.72□□□□□ -2.13
CNKSR3Q6P9H4 RNU6-1065P-201ENST00000384513 106 ntBASIC1.72□□□□□ -2.13
CNKSR3Q6P9H4 MIR517C-201ENST00000385103 95 ntBASIC1.72□□□□□ -2.13
CNKSR3Q6P9H4 MT-TF-201ENST00000387314 71 ntBASIC1.72□□□□□ -2.13
CNKSR3Q6P9H4 RNU6-1254P-201ENST00000391266 104 ntBASIC1.72□□□□□ -2.13
CNKSR3Q6P9H4 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.72□□□□□ -2.13
CNKSR3Q6P9H4 MIR1276-201ENST00000408707 83 ntBASIC1.72□□□□□ -2.13
CNKSR3Q6P9H4 AL133373.1-201ENST00000497098 94 ntBASIC1.72□□□□□ -2.13
CNKSR3Q6P9H4 MIR3937-201ENST00000580135 106 ntBASIC1.72□□□□□ -2.13
CNKSR3Q6P9H4 MIR4536-1-201ENST00000583537 88 ntBASIC1.72□□□□□ -2.13
CNKSR3Q6P9H4 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.72□□□□□ -2.13
CNKSR3Q6P9H4 RNU6-161P-201ENST00000363051 106 ntBASIC1.71□□□□□ -2.14
CNKSR3Q6P9H4 Y_RNA.283-201ENST00000364798 112 ntBASIC1.71□□□□□ -2.14
CNKSR3Q6P9H4 SNORA18.5-201ENST00000516616 101 ntBASIC1.71□□□□□ -2.14
CNKSR3Q6P9H4 AC019176.1-201ENST00000518519 225 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 166.9 ms