Protein–RNA interactions for Protein: Q6P087

RPUSD3, Mitochondrial mRNA pseudouridine synthase RPUSD3, humanhuman

Known RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3Q6P087 AC108059.2-201ENST00000434626 151 ntBASIC-0.16□□□□□ -2.44
RPUSD3Q6P087 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.16□□□□□ -2.44
RPUSD3Q6P087 IGLVI-20-201ENST00000519296 130 ntBASIC-0.16□□□□□ -2.44
RPUSD3Q6P087 MIR4752-201ENST00000579672 72 ntBASIC-0.16□□□□□ -2.44
RPUSD3Q6P087 AC072026.1-201ENST00000605023 201 ntBASIC-0.16□□□□□ -2.44
RPUSD3Q6P087 AL162376.1-201ENST00000624117 175 ntBASIC-0.16□□□□□ -2.44
RPUSD3Q6P087 MIR499B-201ENST00000636498 73 ntBASIC-0.16□□□□□ -2.44
RPUSD3Q6P087 Y_RNA.298-201ENST00000364960 107 ntBASIC-0.17□□□□□ -2.44
RPUSD3Q6P087 RNU6-449P-201ENST00000383914 107 ntBASIC-0.17□□□□□ -2.44
RPUSD3Q6P087 Y_RNA.489-201ENST00000384410 101 ntBASIC-0.17□□□□□ -2.44
RPUSD3Q6P087 MIR501-201ENST00000390204 84 ntBASIC-0.17□□□□□ -2.44
RPUSD3Q6P087 RNU6-588P-201ENST00000410281 105 ntBASIC-0.17□□□□□ -2.44
RPUSD3Q6P087 RNU7-165P-201ENST00000458864 60 ntBASIC-0.17□□□□□ -2.44
RPUSD3Q6P087 RNU7-123P-201ENST00000515911 60 ntBASIC-0.17□□□□□ -2.44
RPUSD3Q6P087 MIR4500-201ENST00000579472 76 ntBASIC-0.17□□□□□ -2.44
RPUSD3Q6P087 MIR655-201ENST00000362159 97 ntBASIC-0.18□□□□□ -2.44
RPUSD3Q6P087 Y_RNA.452-201ENST00000384202 108 ntBASIC-0.18□□□□□ -2.44
RPUSD3Q6P087 RNU6-269P-201ENST00000391077 97 ntBASIC-0.18□□□□□ -2.44
RPUSD3Q6P087 AC097635.1-201ENST00000450678 155 ntBASIC-0.18□□□□□ -2.44
RPUSD3Q6P087 RNU7-161P-201ENST00000517289 62 ntBASIC-0.18□□□□□ -2.44
RPUSD3Q6P087 AC009779.6-201ENST00000603972 165 ntBASIC-0.18□□□□□ -2.44
RPUSD3Q6P087 AL670379.3-201ENST00000605040 251 ntBASIC-0.18□□□□□ -2.44
RPUSD3Q6P087 AP001362.1-201ENST00000625165 124 ntBASIC-0.18□□□□□ -2.44
RPUSD3Q6P087 RNA5SP403-201ENST00000363598 108 ntBASIC-0.19□□□□□ -2.44
RPUSD3Q6P087 Y_RNA.307-201ENST00000365022 117 ntBASIC-0.19□□□□□ -2.44
RPUSD3Q6P087 RNU6-47P-201ENST00000383866 107 ntBASIC-0.19□□□□□ -2.44
RPUSD3Q6P087 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.19□□□□□ -2.44
RPUSD3Q6P087 MTND3P2-201ENST00000438452 342 ntBASIC-0.19□□□□□ -2.44
RPUSD3Q6P087 RNU6-1219P-201ENST00000516143 112 ntBASIC-0.19□□□□□ -2.44
RPUSD3Q6P087 RNA5SP476-201ENST00000516613 103 ntBASIC-0.19□□□□□ -2.44
RPUSD3Q6P087 MIR3925-201ENST00000584674 77 ntBASIC-0.19□□□□□ -2.44
RPUSD3Q6P087 DNAJC19P2-201ENST00000593340 302 ntBASIC-0.19□□□□□ -2.44
RPUSD3Q6P087 RNU6-509P-201ENST00000363519 107 ntBASIC-0.2□□□□□ -2.44
RPUSD3Q6P087 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.2□□□□□ -2.44
RPUSD3Q6P087 RNU6-865P-201ENST00000364772 107 ntBASIC-0.2□□□□□ -2.44
RPUSD3Q6P087 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.2□□□□□ -2.44
RPUSD3Q6P087 MIR206-201ENST00000384872 86 ntBASIC-0.2□□□□□ -2.44
RPUSD3Q6P087 SNORD41.1-201ENST00000391000 69 ntBASIC-0.2□□□□□ -2.44
RPUSD3Q6P087 AL603914.1-201ENST00000401964 204 ntBASIC-0.2□□□□□ -2.44
RPUSD3Q6P087 RNU7-159P-201ENST00000459284 62 ntBASIC-0.2□□□□□ -2.44
RPUSD3Q6P087 Y_RNA.680-201ENST00000516441 93 ntBASIC-0.2□□□□□ -2.44
RPUSD3Q6P087 Y_RNA.690-201ENST00000516603 95 ntBASIC-0.2□□□□□ -2.44
RPUSD3Q6P087 MIR5589-201ENST00000579442 60 ntBASIC-0.2□□□□□ -2.44
RPUSD3Q6P087 RNU4-84P-201ENST00000364200 139 ntBASIC-0.21□□□□□ -2.44
RPUSD3Q6P087 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.21□□□□□ -2.44
RPUSD3Q6P087 MIR599-201ENST00000385069 95 ntBASIC-0.21□□□□□ -2.44
RPUSD3Q6P087 RNU6-180P-201ENST00000516697 61 ntBASIC-0.21□□□□□ -2.44
RPUSD3Q6P087 SNORA70.25-201ENST00000612741 95 ntBASIC-0.21□□□□□ -2.44
RPUSD3Q6P087 RNU7-74P-201ENST00000459104 62 ntBASIC-0.22□□□□□ -2.44
RPUSD3Q6P087 RNU7-121P-201ENST00000516604 62 ntBASIC-0.22□□□□□ -2.44
RPUSD3Q6P087 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.22□□□□□ -2.44
RPUSD3Q6P087 MIR4636-201ENST00000582271 80 ntBASIC-0.22□□□□□ -2.44
RPUSD3Q6P087 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.23□□□□□ -2.45
RPUSD3Q6P087 Y_RNA.644-201ENST00000459006 113 ntBASIC-0.23□□□□□ -2.45
RPUSD3Q6P087 SNORD4A-201ENST00000459174 72 ntBASIC-0.23□□□□□ -2.45
RPUSD3Q6P087 RNU7-2P-201ENST00000516096 62 ntBASIC-0.23□□□□□ -2.45
RPUSD3Q6P087 Y_RNA.674-201ENST00000516362 113 ntBASIC-0.23□□□□□ -2.45
RPUSD3Q6P087 MIR4503-201ENST00000582187 83 ntBASIC-0.23□□□□□ -2.45
RPUSD3Q6P087 MIR548AD-201ENST00000584780 82 ntBASIC-0.23□□□□□ -2.45
RPUSD3Q6P087 AL137067.1-201ENST00000615933 120 ntBASIC-0.23□□□□□ -2.45
RPUSD3Q6P087 SNORD114-31-201ENST00000363219 75 ntBASIC-0.24□□□□□ -2.45
RPUSD3Q6P087 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.24□□□□□ -2.45
RPUSD3Q6P087 MIR106A-201ENST00000384870 81 ntBASIC-0.24□□□□□ -2.45
RPUSD3Q6P087 MIR214-201ENST00000385214 110 ntBASIC-0.24□□□□□ -2.45
RPUSD3Q6P087 AC244250.2-201ENST00000418731 148 ntBASIC-0.24□□□□□ -2.45
RPUSD3Q6P087 SCARNA15.1-201ENST00000516384 125 ntBASIC-0.24□□□□□ -2.45
RPUSD3Q6P087 RNU2-60P-201ENST00000517290 128 ntBASIC-0.24□□□□□ -2.45
RPUSD3Q6P087 AL590491.3-201ENST00000610731 82 ntBASIC-0.24□□□□□ -2.45
RPUSD3Q6P087 MIR6086-201ENST00000638065 55 ntBASIC-0.24□□□□□ -2.45
RPUSD3Q6P087 SNORD114-11-201ENST00000363738 75 ntBASIC-0.25□□□□□ -2.45
RPUSD3Q6P087 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.25□□□□□ -2.45
RPUSD3Q6P087 MIR519A1-201ENST00000385257 85 ntBASIC-0.25□□□□□ -2.45
RPUSD3Q6P087 RNA5SP300-201ENST00000391197 107 ntBASIC-0.25□□□□□ -2.45
RPUSD3Q6P087 MIR1265-201ENST00000408444 86 ntBASIC-0.25□□□□□ -2.45
RPUSD3Q6P087 TRAJ51-201ENST00000504127 63 ntBASIC-0.25□□□□□ -2.45
RPUSD3Q6P087 AC130289.1-201ENST00000577321 73 ntBASIC-0.25□□□□□ -2.45
RPUSD3Q6P087 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.26□□□□□ -2.45
RPUSD3Q6P087 SNORA18.1-201ENST00000363418 128 ntBASIC-0.26□□□□□ -2.45
RPUSD3Q6P087 RNA5SP275-201ENST00000363936 118 ntBASIC-0.26□□□□□ -2.45
RPUSD3Q6P087 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.26□□□□□ -2.45
RPUSD3Q6P087 RNA5SP163-201ENST00000410304 99 ntBASIC-0.26□□□□□ -2.45
RPUSD3Q6P087 AC096531.1-201ENST00000419107 107 ntBASIC-0.26□□□□□ -2.45
RPUSD3Q6P087 RNU6-320P-201ENST00000516511 106 ntBASIC-0.26□□□□□ -2.45
RPUSD3Q6P087 AP002392.1-201ENST00000537692 208 ntBASIC-0.26□□□□□ -2.45
RPUSD3Q6P087 MIR4677-201ENST00000584153 80 ntBASIC-0.26□□□□□ -2.45
RPUSD3Q6P087 uc_338.28-201ENST00000612082 187 ntBASIC-0.26□□□□□ -2.45
RPUSD3Q6P087 MIR6507-201ENST00000613630 70 ntBASIC-0.26□□□□□ -2.45
RPUSD3Q6P087 RNA5SP205-201ENST00000364653 136 ntBASIC-0.27□□□□□ -2.45
RPUSD3Q6P087 Y_RNA.297-201ENST00000364950 91 ntBASIC-0.27□□□□□ -2.45
RPUSD3Q6P087 MIR196A2-201ENST00000385189 110 ntBASIC-0.27□□□□□ -2.45
RPUSD3Q6P087 SNORA75.1-201ENST00000391130 148 ntBASIC-0.27□□□□□ -2.45
RPUSD3Q6P087 MIR1270-201ENST00000459320 83 ntBASIC-0.27□□□□□ -2.45
RPUSD3Q6P087 Y_RNA.651-201ENST00000459380 103 ntBASIC-0.27□□□□□ -2.45
RPUSD3Q6P087 MIR4802-201ENST00000581881 80 ntBASIC-0.27□□□□□ -2.45
RPUSD3Q6P087 MIR4719-201ENST00000585233 84 ntBASIC-0.27□□□□□ -2.45
RPUSD3Q6P087 MIR8064-201ENST00000612863 90 ntBASIC-0.27□□□□□ -2.45
RPUSD3Q6P087 RNU6-170P-201ENST00000362832 104 ntBASIC-0.28□□□□□ -2.45
RPUSD3Q6P087 RNA5SP98-201ENST00000363158 137 ntBASIC-0.28□□□□□ -2.45
RPUSD3Q6P087 RNU6-309P-201ENST00000364573 106 ntBASIC-0.28□□□□□ -2.45
RPUSD3Q6P087 SNORD115-35-201ENST00000365122 82 ntBASIC-0.28□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 242.7 ms