Protein–RNA interactions for Protein: Q6A163

KRT39, Keratin, type I cytoskeletal 39, humanhuman

Predictions only

Length 491 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39Q6A163 SNORD115-18-201ENST00000363293 82 ntBASIC0.39□□□□□ -2.35
KRT39Q6A163 Y_RNA.127-201ENST00000363386 109 ntBASIC0.39□□□□□ -2.35
KRT39Q6A163 SNORD115-17-201ENST00000364612 82 ntBASIC0.39□□□□□ -2.35
KRT39Q6A163 RNA5SP117-201ENST00000365294 118 ntBASIC0.39□□□□□ -2.35
KRT39Q6A163 Y_RNA.344-201ENST00000365381 112 ntBASIC0.39□□□□□ -2.35
KRT39Q6A163 RNU6-1321P-201ENST00000390905 107 ntBASIC0.39□□□□□ -2.35
KRT39Q6A163 AL353813.1-201ENST00000440700 253 ntBASIC0.39□□□□□ -2.35
KRT39Q6A163 SNORA25.16-201ENST00000516741 121 ntBASIC0.39□□□□□ -2.35
KRT39Q6A163 RNU7-6P-201ENST00000516845 62 ntBASIC0.39□□□□□ -2.35
KRT39Q6A163 AC138749.4-201ENST00000563970 127 ntBASIC0.39□□□□□ -2.35
KRT39Q6A163 MIR3163-201ENST00000581592 73 ntBASIC0.39□□□□□ -2.35
KRT39Q6A163 AL035470.1-201ENST00000622571 220 ntBASIC0.39□□□□□ -2.35
KRT39Q6A163 RNU6-403P-201ENST00000363163 104 ntBASIC0.38□□□□□ -2.35
KRT39Q6A163 SNORD114-10-201ENST00000363409 72 ntBASIC0.38□□□□□ -2.35
KRT39Q6A163 Y_RNA.213-201ENST00000364178 111 ntBASIC0.38□□□□□ -2.35
KRT39Q6A163 Y_RNA.299-201ENST00000364973 94 ntBASIC0.38□□□□□ -2.35
KRT39Q6A163 Y_RNA.353-201ENST00000365440 108 ntBASIC0.38□□□□□ -2.35
KRT39Q6A163 Y_RNA.448-201ENST00000384185 108 ntBASIC0.38□□□□□ -2.35
KRT39Q6A163 SNORA50A-201ENST00000384225 134 ntBASIC0.38□□□□□ -2.35
KRT39Q6A163 MIR548D2-201ENST00000384955 97 ntBASIC0.38□□□□□ -2.35
KRT39Q6A163 RNA5SP193-201ENST00000410353 107 ntBASIC0.38□□□□□ -2.35
KRT39Q6A163 RNU4-61P-201ENST00000411243 107 ntBASIC0.38□□□□□ -2.35
KRT39Q6A163 RNU6-406P-201ENST00000516470 107 ntBASIC0.38□□□□□ -2.35
KRT39Q6A163 SNORA25.18-201ENST00000607153 114 ntBASIC0.38□□□□□ -2.35
KRT39Q6A163 U6.109-201ENST00000636749 87 ntBASIC0.38□□□□□ -2.35
KRT39Q6A163 AC132825.6-201ENST00000638861 357 ntBASIC0.38□□□□□ -2.35
KRT39Q6A163 Y_RNA.36-201ENST00000362602 112 ntBASIC0.37□□□□□ -2.35
KRT39Q6A163 RNA5SP133-201ENST00000363368 119 ntBASIC0.37□□□□□ -2.35
KRT39Q6A163 SNORA72.6-201ENST00000384520 129 ntBASIC0.37□□□□□ -2.35
KRT39Q6A163 Y_RNA.549-201ENST00000384657 102 ntBASIC0.37□□□□□ -2.35
KRT39Q6A163 MIR518A1-201ENST00000385068 85 ntBASIC0.37□□□□□ -2.35
KRT39Q6A163 SNORD77B-201ENST00000391112 67 ntBASIC0.37□□□□□ -2.35
KRT39Q6A163 SNORA40.8-201ENST00000411034 126 ntBASIC0.37□□□□□ -2.35
KRT39Q6A163 RNU7-2P-201ENST00000516096 62 ntBASIC0.37□□□□□ -2.35
KRT39Q6A163 RNU6-531P-201ENST00000516694 104 ntBASIC0.37□□□□□ -2.35
KRT39Q6A163 RNA5SP480-201ENST00000516840 109 ntBASIC0.37□□□□□ -2.35
KRT39Q6A163 RNU6-765P-201ENST00000516916 99 ntBASIC0.37□□□□□ -2.35
KRT39Q6A163 AC243829.6-201ENST00000612652 106 ntBASIC0.37□□□□□ -2.35
KRT39Q6A163 Y_RNA.32-201ENST00000362589 110 ntBASIC0.36□□□□□ -2.35
KRT39Q6A163 RNY1P2-201ENST00000364820 117 ntBASIC0.36□□□□□ -2.35
KRT39Q6A163 SNORD115-35-201ENST00000365122 82 ntBASIC0.36□□□□□ -2.35
KRT39Q6A163 Y_RNA.346-201ENST00000365385 112 ntBASIC0.36□□□□□ -2.35
KRT39Q6A163 Y_RNA.362-201ENST00000365518 110 ntBASIC0.36□□□□□ -2.35
KRT39Q6A163 RNU6-22P-201ENST00000384355 107 ntBASIC0.36□□□□□ -2.35
KRT39Q6A163 SNORA8.2-201ENST00000384372 139 ntBASIC0.36□□□□□ -2.35
KRT39Q6A163 Y_RNA.563-201ENST00000384707 108 ntBASIC0.36□□□□□ -2.35
KRT39Q6A163 Y_RNA.567-201ENST00000384736 106 ntBASIC0.36□□□□□ -2.35
KRT39Q6A163 RNU6-1168P-201ENST00000390831 104 ntBASIC0.36□□□□□ -2.35
KRT39Q6A163 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.36□□□□□ -2.35
KRT39Q6A163 MTND5P34-201ENST00000568888 325 ntBASIC0.36□□□□□ -2.35
KRT39Q6A163 RN7SL793P-201ENST00000583259 296 ntBASIC0.36□□□□□ -2.35
KRT39Q6A163 MIR376B-201ENST00000614515 100 ntBASIC0.36□□□□□ -2.35
KRT39Q6A163 uc_338.16-201ENST00000621804 95 ntBASIC0.36□□□□□ -2.35
KRT39Q6A163 MIR103A1-201ENST00000362165 78 ntBASIC0.35□□□□□ -2.35
KRT39Q6A163 Y_RNA.119-201ENST00000363301 96 ntBASIC0.35□□□□□ -2.35
KRT39Q6A163 SNORA36.1-201ENST00000363424 132 ntBASIC0.35□□□□□ -2.35
KRT39Q6A163 SNORD118-201ENST00000363593 134 ntBASIC0.35□□□□□ -2.35
KRT39Q6A163 RNU6-291P-201ENST00000384720 107 ntBASIC0.35□□□□□ -2.35
KRT39Q6A163 MIR34C-201ENST00000384831 77 ntBASIC0.35□□□□□ -2.35
KRT39Q6A163 MIR548A1-201ENST00000385041 97 ntBASIC0.35□□□□□ -2.35
KRT39Q6A163 MIR644A-201ENST00000385262 94 ntBASIC0.35□□□□□ -2.35
KRT39Q6A163 AC008267.6-201ENST00000441664 139 ntBASIC0.35□□□□□ -2.35
KRT39Q6A163 RNU7-48P-201ENST00000458875 63 ntBASIC0.35□□□□□ -2.35
KRT39Q6A163 Y_RNA.649-201ENST00000459077 103 ntBASIC0.35□□□□□ -2.35
KRT39Q6A163 RNU6-521P-201ENST00000516663 105 ntBASIC0.35□□□□□ -2.35
KRT39Q6A163 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.35□□□□□ -2.35
KRT39Q6A163 U6.95-201ENST00000636931 70 ntBASIC0.35□□□□□ -2.35
KRT39Q6A163 Y_RNA.247-201ENST00000364500 92 ntBASIC0.34□□□□□ -2.36
KRT39Q6A163 RNU4-67P-201ENST00000364569 141 ntBASIC0.34□□□□□ -2.36
KRT39Q6A163 RNA5SP205-201ENST00000364653 136 ntBASIC0.34□□□□□ -2.36
KRT39Q6A163 Y_RNA.328-201ENST00000365208 113 ntBASIC0.34□□□□□ -2.36
KRT39Q6A163 RNU6-1117P-201ENST00000384525 104 ntBASIC0.34□□□□□ -2.36
KRT39Q6A163 SNORA19-201ENST00000384737 128 ntBASIC0.34□□□□□ -2.36
KRT39Q6A163 SNORA7.5-201ENST00000410672 110 ntBASIC0.34□□□□□ -2.36
KRT39Q6A163 RNU6-479P-201ENST00000516348 105 ntBASIC0.34□□□□□ -2.36
KRT39Q6A163 RNU6-1006P-201ENST00000516998 103 ntBASIC0.34□□□□□ -2.36
KRT39Q6A163 AC007012.1-201ENST00000567192 175 ntBASIC0.34□□□□□ -2.36
KRT39Q6A163 AP001362.1-201ENST00000625165 124 ntBASIC0.34□□□□□ -2.36
KRT39Q6A163 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.34□□□□□ -2.36
KRT39Q6A163 Y_RNA.35-201ENST00000362601 101 ntBASIC0.33□□□□□ -2.36
KRT39Q6A163 RNU6-363P-201ENST00000362895 105 ntBASIC0.33□□□□□ -2.36
KRT39Q6A163 RNU4-58P-201ENST00000363192 141 ntBASIC0.33□□□□□ -2.36
KRT39Q6A163 SNORD44.1-201ENST00000363202 61 ntBASIC0.33□□□□□ -2.36
KRT39Q6A163 SNORD114-23-201ENST00000363536 72 ntBASIC0.33□□□□□ -2.36
KRT39Q6A163 SNORA63.5-201ENST00000363548 123 ntBASIC0.33□□□□□ -2.36
KRT39Q6A163 RNY4P6-201ENST00000363667 96 ntBASIC0.33□□□□□ -2.36
KRT39Q6A163 RNA5SP245-201ENST00000364239 121 ntBASIC0.33□□□□□ -2.36
KRT39Q6A163 VTRNA1-3-201ENST00000365645 89 ntBASIC0.33□□□□□ -2.36
KRT39Q6A163 MIR548A3-201ENST00000385297 97 ntBASIC0.33□□□□□ -2.36
KRT39Q6A163 RNU6-816P-201ENST00000390914 107 ntBASIC0.33□□□□□ -2.36
KRT39Q6A163 RNU6-1268P-201ENST00000391214 107 ntBASIC0.33□□□□□ -2.36
KRT39Q6A163 RNU6-1239P-201ENST00000391310 107 ntBASIC0.33□□□□□ -2.36
KRT39Q6A163 SNORD71-201ENST00000411292 86 ntBASIC0.33□□□□□ -2.36
KRT39Q6A163 SNORA31.14-201ENST00000516728 116 ntBASIC0.33□□□□□ -2.36
KRT39Q6A163 Y_RNA.697-201ENST00000516776 113 ntBASIC0.33□□□□□ -2.36
KRT39Q6A163 DEFB131E-201ENST00000532329 154 ntBASIC0.33□□□□□ -2.36
KRT39Q6A163 MIR4679-2-201ENST00000578358 77 ntBASIC0.33□□□□□ -2.36
KRT39Q6A163 AL670379.3-201ENST00000605040 251 ntBASIC0.33□□□□□ -2.36
KRT39Q6A163 AL162726.3-218ENST00000636401 95 ntBASIC0.33□□□□□ -2.36
KRT39Q6A163 U2.22-201ENST00000636441 106 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 191.2 ms