Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 uc_338.16-201ENST00000621804 95 ntBASIC0.52□□□□□ -2.33
LYSMD4Q5XG99 Y_RNA.198-201ENST00000364013 98 ntBASIC0.51□□□□□ -2.33
LYSMD4Q5XG99 Y_RNA.218-201ENST00000364218 104 ntBASIC0.51□□□□□ -2.33
LYSMD4Q5XG99 Y_RNA.536-201ENST00000384621 113 ntBASIC0.51□□□□□ -2.33
LYSMD4Q5XG99 RNU6-535P-201ENST00000384722 107 ntBASIC0.51□□□□□ -2.33
LYSMD4Q5XG99 MIR92A1-201ENST00000385233 78 ntBASIC0.51□□□□□ -2.33
LYSMD4Q5XG99 MIRLET7F2-201ENST00000385277 83 ntBASIC0.51□□□□□ -2.33
LYSMD4Q5XG99 SNORD77B-201ENST00000391112 67 ntBASIC0.51□□□□□ -2.33
LYSMD4Q5XG99 AC114737.2-201ENST00000421583 173 ntBASIC0.51□□□□□ -2.33
LYSMD4Q5XG99 RNU6-772P-201ENST00000516042 105 ntBASIC0.51□□□□□ -2.33
LYSMD4Q5XG99 RNU7-2P-201ENST00000516096 62 ntBASIC0.51□□□□□ -2.33
LYSMD4Q5XG99 RNU6-1194P-201ENST00000516208 104 ntBASIC0.51□□□□□ -2.33
LYSMD4Q5XG99 AC025166.1-201ENST00000612411 163 ntBASIC0.51□□□□□ -2.33
LYSMD4Q5XG99 MTND5P18-201ENST00000445624 1801 ntBASIC0.5□□□□□ -2.33
LYSMD4Q5XG99 RNU6-746P-201ENST00000384112 109 ntBASIC0.5□□□□□ -2.33
LYSMD4Q5XG99 RNU6-733P-201ENST00000410759 104 ntBASIC0.5□□□□□ -2.33
LYSMD4Q5XG99 RNU7-48P-201ENST00000458875 63 ntBASIC0.5□□□□□ -2.33
LYSMD4Q5XG99 RNU6-765P-201ENST00000516916 99 ntBASIC0.5□□□□□ -2.33
LYSMD4Q5XG99 MIR4500-201ENST00000579472 76 ntBASIC0.5□□□□□ -2.33
LYSMD4Q5XG99 MIR376B-201ENST00000614515 100 ntBASIC0.5□□□□□ -2.33
LYSMD4Q5XG99 RNA5SP257-201ENST00000363023 116 ntBASIC0.49□□□□□ -2.33
LYSMD4Q5XG99 RNU4-58P-201ENST00000363192 141 ntBASIC0.49□□□□□ -2.33
LYSMD4Q5XG99 RNA5SP517-201ENST00000364724 117 ntBASIC0.49□□□□□ -2.33
LYSMD4Q5XG99 SNORD115-35-201ENST00000365122 82 ntBASIC0.49□□□□□ -2.33
LYSMD4Q5XG99 MIR1197-201ENST00000408818 88 ntBASIC0.49□□□□□ -2.33
LYSMD4Q5XG99 RNA5SP136-201ENST00000410906 107 ntBASIC0.49□□□□□ -2.33
LYSMD4Q5XG99 RNA5SP94-201ENST00000516917 108 ntBASIC0.49□□□□□ -2.33
LYSMD4Q5XG99 MIR3163-201ENST00000581592 73 ntBASIC0.49□□□□□ -2.33
LYSMD4Q5XG99 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
LYSMD4Q5XG99 Y_RNA.213-201ENST00000364178 111 ntBASIC0.48□□□□□ -2.33
LYSMD4Q5XG99 Y_RNA.344-201ENST00000365381 112 ntBASIC0.48□□□□□ -2.33
LYSMD4Q5XG99 VTRNA1-3-201ENST00000365645 89 ntBASIC0.48□□□□□ -2.33
LYSMD4Q5XG99 MIR34C-201ENST00000384831 77 ntBASIC0.48□□□□□ -2.33
LYSMD4Q5XG99 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.48□□□□□ -2.33
LYSMD4Q5XG99 BX276092.1-201ENST00000427368 251 ntBASIC0.48□□□□□ -2.33
LYSMD4Q5XG99 RNU6-521P-201ENST00000516663 105 ntBASIC0.48□□□□□ -2.33
LYSMD4Q5XG99 AP003327.1-201ENST00000529684 127 ntBASIC0.48□□□□□ -2.33
LYSMD4Q5XG99 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.48□□□□□ -2.33
LYSMD4Q5XG99 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC0.48□□□□□ -2.33
LYSMD4Q5XG99 Y_RNA.71-201ENST00000362892 104 ntBASIC0.47□□□□□ -2.33
LYSMD4Q5XG99 SNORA36.1-201ENST00000363424 132 ntBASIC0.47□□□□□ -2.33
LYSMD4Q5XG99 RNU6-704P-201ENST00000364162 103 ntBASIC0.47□□□□□ -2.33
LYSMD4Q5XG99 Y_RNA.328-201ENST00000365208 113 ntBASIC0.47□□□□□ -2.33
LYSMD4Q5XG99 Y_RNA.567-201ENST00000384736 106 ntBASIC0.47□□□□□ -2.33
LYSMD4Q5XG99 RN7SKP12-201ENST00000516275 143 ntBASIC0.47□□□□□ -2.33
LYSMD4Q5XG99 uc_338.17-201ENST00000619633 179 ntBASIC0.47□□□□□ -2.33
LYSMD4Q5XG99 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.47□□□□□ -2.33
LYSMD4Q5XG99 AL157777.2-201ENST00000258070 137 ntBASIC0.46□□□□□ -2.34
LYSMD4Q5XG99 MIR101-2-201ENST00000362195 79 ntBASIC0.46□□□□□ -2.34
LYSMD4Q5XG99 SNORD115-19-201ENST00000363098 82 ntBASIC0.46□□□□□ -2.34
LYSMD4Q5XG99 SNORD115-18-201ENST00000363293 82 ntBASIC0.46□□□□□ -2.34
LYSMD4Q5XG99 Y_RNA.127-201ENST00000363386 109 ntBASIC0.46□□□□□ -2.34
LYSMD4Q5XG99 SNORD18A-201ENST00000363753 72 ntBASIC0.46□□□□□ -2.34
LYSMD4Q5XG99 SNORD115-17-201ENST00000364612 82 ntBASIC0.46□□□□□ -2.34
LYSMD4Q5XG99 MIR548D2-201ENST00000384955 97 ntBASIC0.46□□□□□ -2.34
LYSMD4Q5XG99 SNORA7.5-201ENST00000410672 110 ntBASIC0.46□□□□□ -2.34
LYSMD4Q5XG99 Y_RNA.681-201ENST00000516445 113 ntBASIC0.46□□□□□ -2.34
LYSMD4Q5XG99 SNORA25.18-201ENST00000607153 114 ntBASIC0.46□□□□□ -2.34
LYSMD4Q5XG99 Y_RNA.68-201ENST00000362881 102 ntBASIC0.45□□□□□ -2.34
LYSMD4Q5XG99 Y_RNA.98-201ENST00000363109 102 ntBASIC0.45□□□□□ -2.34
LYSMD4Q5XG99 RNU6-865P-201ENST00000364772 107 ntBASIC0.45□□□□□ -2.34
LYSMD4Q5XG99 MIR539-201ENST00000365690 78 ntBASIC0.45□□□□□ -2.34
LYSMD4Q5XG99 RNU6-429P-201ENST00000384582 108 ntBASIC0.45□□□□□ -2.34
LYSMD4Q5XG99 MIR759-201ENST00000390224 91 ntBASIC0.45□□□□□ -2.34
LYSMD4Q5XG99 MIR548M-201ENST00000408260 86 ntBASIC0.45□□□□□ -2.34
LYSMD4Q5XG99 SUMO1P3-201ENST00000439961 304 ntBASIC0.45□□□□□ -2.34
LYSMD4Q5XG99 AL353813.1-201ENST00000440700 253 ntBASIC0.45□□□□□ -2.34
LYSMD4Q5XG99 SNORA68.3-201ENST00000515906 83 ntBASIC0.45□□□□□ -2.34
LYSMD4Q5XG99 AC092634.7-201ENST00000621022 103 ntBASIC0.45□□□□□ -2.34
LYSMD4Q5XG99 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.45□□□□□ -2.34
LYSMD4Q5XG99 RNU6-80P-201ENST00000384195 107 ntBASIC0.44□□□□□ -2.34
LYSMD4Q5XG99 AL157398.1-201ENST00000452981 186 ntBASIC0.44□□□□□ -2.34
LYSMD4Q5XG99 AP001362.1-201ENST00000625165 124 ntBASIC0.44□□□□□ -2.34
LYSMD4Q5XG99 Y_RNA.247-201ENST00000364500 92 ntBASIC0.43□□□□□ -2.34
LYSMD4Q5XG99 SNORD50.2-201ENST00000365465 70 ntBASIC0.43□□□□□ -2.34
LYSMD4Q5XG99 Y_RNA.360-201ENST00000365512 102 ntBASIC0.43□□□□□ -2.34
LYSMD4Q5XG99 SNORA50A-201ENST00000384225 134 ntBASIC0.43□□□□□ -2.34
LYSMD4Q5XG99 Y_RNA.549-201ENST00000384657 102 ntBASIC0.43□□□□□ -2.34
LYSMD4Q5XG99 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.43□□□□□ -2.34
LYSMD4Q5XG99 TRAJ51-201ENST00000504127 63 ntBASIC0.43□□□□□ -2.34
LYSMD4Q5XG99 RNU6-469P-201ENST00000516253 101 ntBASIC0.43□□□□□ -2.34
LYSMD4Q5XG99 RNU6-659P-201ENST00000516454 104 ntBASIC0.43□□□□□ -2.34
LYSMD4Q5XG99 SNORA62.5-201ENST00000516634 120 ntBASIC0.43□□□□□ -2.34
LYSMD4Q5XG99 AL035470.1-201ENST00000622571 220 ntBASIC0.43□□□□□ -2.34
LYSMD4Q5XG99 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.43□□□□□ -2.34
LYSMD4Q5XG99 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.43□□□□□ -2.34
LYSMD4Q5XG99 Y_RNA.49-201ENST00000362714 112 ntBASIC0.42□□□□□ -2.34
LYSMD4Q5XG99 Y_RNA.56-201ENST00000362798 112 ntBASIC0.42□□□□□ -2.34
LYSMD4Q5XG99 Y_RNA.174-201ENST00000363781 105 ntBASIC0.42□□□□□ -2.34
LYSMD4Q5XG99 RNU4-67P-201ENST00000364569 141 ntBASIC0.42□□□□□ -2.34
LYSMD4Q5XG99 Y_RNA.261-201ENST00000364631 102 ntBASIC0.42□□□□□ -2.34
LYSMD4Q5XG99 Y_RNA.362-201ENST00000365518 110 ntBASIC0.42□□□□□ -2.34
LYSMD4Q5XG99 SNORA8.2-201ENST00000384372 139 ntBASIC0.42□□□□□ -2.34
LYSMD4Q5XG99 SNORD33.1-201ENST00000516213 88 ntBASIC0.42□□□□□ -2.34
LYSMD4Q5XG99 AC244669.1-204ENST00000621564 178 ntBASIC0.42□□□□□ -2.34
LYSMD4Q5XG99 RNA5SP62-201ENST00000363457 110 ntBASIC0.41□□□□□ -2.34
LYSMD4Q5XG99 Y_RNA.346-201ENST00000365385 112 ntBASIC0.41□□□□□ -2.34
LYSMD4Q5XG99 SNORD28-201ENST00000384706 75 ntBASIC0.41□□□□□ -2.34
LYSMD4Q5XG99 MIR548A1-201ENST00000385041 97 ntBASIC0.41□□□□□ -2.34
LYSMD4Q5XG99 MIR4514-201ENST00000581410 57 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 8.8 ms