Protein–RNA interactions for Protein: Q5VIR6

VPS53, Vacuolar protein sorting-associated protein 53 homolog, humanhuman

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53Q5VIR6 RNU6-1194P-201ENST00000516208 104 ntBASIC1.11□□□□□ -2.23
VPS53Q5VIR6 SNORD92-201ENST00000585078 85 ntBASIC1.11□□□□□ -2.23
VPS53Q5VIR6 AC096720.1-201ENST00000604441 183 ntBASIC1.11□□□□□ -2.23
VPS53Q5VIR6 Y_RNA.818-201ENST00000618813 71 ntBASIC1.11□□□□□ -2.23
VPS53Q5VIR6 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
VPS53Q5VIR6 HSBP1P2-201ENST00000299671 229 ntBASIC1.1□□□□□ -2.23
VPS53Q5VIR6 Y_RNA.119-201ENST00000363301 96 ntBASIC1.1□□□□□ -2.23
VPS53Q5VIR6 MIR942-201ENST00000401111 86 ntBASIC1.1□□□□□ -2.23
VPS53Q5VIR6 MIR938-201ENST00000401216 83 ntBASIC1.1□□□□□ -2.23
VPS53Q5VIR6 AC015818.7-201ENST00000428754 109 ntBASIC1.1□□□□□ -2.23
VPS53Q5VIR6 AC087499.7-201ENST00000441958 109 ntBASIC1.1□□□□□ -2.23
VPS53Q5VIR6 RNU6-1110P-201ENST00000516462 101 ntBASIC1.1□□□□□ -2.23
VPS53Q5VIR6 RNU6-765P-201ENST00000516916 99 ntBASIC1.1□□□□□ -2.23
VPS53Q5VIR6 RNU6-537P-201ENST00000517277 103 ntBASIC1.1□□□□□ -2.23
VPS53Q5VIR6 MIR4698-201ENST00000577795 80 ntBASIC1.1□□□□□ -2.23
VPS53Q5VIR6 MIR4804-201ENST00000581683 73 ntBASIC1.1□□□□□ -2.23
VPS53Q5VIR6 AL136317.1-201ENST00000612653 226 ntBASIC1.1□□□□□ -2.23
VPS53Q5VIR6 MIR6504-201ENST00000613520 61 ntBASIC1.1□□□□□ -2.23
VPS53Q5VIR6 MIR8066-201ENST00000617280 78 ntBASIC1.1□□□□□ -2.23
VPS53Q5VIR6 MIR450A1-201ENST00000362262 91 ntBASIC1.09□□□□□ -2.23
VPS53Q5VIR6 RNU4-58P-201ENST00000363192 141 ntBASIC1.09□□□□□ -2.23
VPS53Q5VIR6 RNU6-1187P-201ENST00000364771 110 ntBASIC1.09□□□□□ -2.23
VPS53Q5VIR6 SNORD114-22-201ENST00000365423 72 ntBASIC1.09□□□□□ -2.23
VPS53Q5VIR6 MIR100-201ENST00000385259 80 ntBASIC1.09□□□□□ -2.23
VPS53Q5VIR6 Y_RNA.601-201ENST00000410500 113 ntBASIC1.09□□□□□ -2.23
VPS53Q5VIR6 U7.7-201ENST00000459276 60 ntBASIC1.09□□□□□ -2.23
VPS53Q5VIR6 MIR6082-201ENST00000613604 109 ntBASIC1.09□□□□□ -2.23
VPS53Q5VIR6 Y_RNA.42-201ENST00000362660 108 ntBASIC1.08□□□□□ -2.24
VPS53Q5VIR6 RNU6-403P-201ENST00000363163 104 ntBASIC1.08□□□□□ -2.24
VPS53Q5VIR6 Y_RNA.226-201ENST00000364337 114 ntBASIC1.08□□□□□ -2.24
VPS53Q5VIR6 Y_RNA.544-201ENST00000384650 113 ntBASIC1.08□□□□□ -2.24
VPS53Q5VIR6 MIR532-201ENST00000385025 91 ntBASIC1.08□□□□□ -2.24
VPS53Q5VIR6 MIR1287-201ENST00000408492 90 ntBASIC1.08□□□□□ -2.24
VPS53Q5VIR6 SNORA19.1-201ENST00000410656 129 ntBASIC1.08□□□□□ -2.24
VPS53Q5VIR6 RNU6-977P-201ENST00000516411 103 ntBASIC1.08□□□□□ -2.24
VPS53Q5VIR6 SNORA25.16-201ENST00000516741 121 ntBASIC1.08□□□□□ -2.24
VPS53Q5VIR6 RNU7-156P-201ENST00000517214 74 ntBASIC1.08□□□□□ -2.24
VPS53Q5VIR6 MIR3613-201ENST00000579844 87 ntBASIC1.08□□□□□ -2.24
VPS53Q5VIR6 Y_RNA.247-201ENST00000364500 92 ntBASIC1.07□□□□□ -2.24
VPS53Q5VIR6 SNORD45B-201ENST00000364617 72 ntBASIC1.07□□□□□ -2.24
VPS53Q5VIR6 RNU6-32P-201ENST00000383948 107 ntBASIC1.07□□□□□ -2.24
VPS53Q5VIR6 RNU6-13P-201ENST00000384248 107 ntBASIC1.07□□□□□ -2.24
VPS53Q5VIR6 RNU6-364P-201ENST00000384387 107 ntBASIC1.07□□□□□ -2.24
VPS53Q5VIR6 SNORA72.6-201ENST00000384520 129 ntBASIC1.07□□□□□ -2.24
VPS53Q5VIR6 RNU6-12P-201ENST00000384604 107 ntBASIC1.07□□□□□ -2.24
VPS53Q5VIR6 RNU6-41P-201ENST00000384741 107 ntBASIC1.07□□□□□ -2.24
VPS53Q5VIR6 MIR590-201ENST00000385008 97 ntBASIC1.07□□□□□ -2.24
VPS53Q5VIR6 RNU7-56P-201ENST00000458744 62 ntBASIC1.07□□□□□ -2.24
VPS53Q5VIR6 SCARNA23-201ENST00000516060 130 ntBASIC1.07□□□□□ -2.24
VPS53Q5VIR6 AC090897.1-201ENST00000580909 226 ntBASIC1.07□□□□□ -2.24
VPS53Q5VIR6 MIR4452-201ENST00000583004 71 ntBASIC1.07□□□□□ -2.24
VPS53Q5VIR6 MIR4439-201ENST00000583746 80 ntBASIC1.07□□□□□ -2.24
VPS53Q5VIR6 Y_RNA.13-201ENST00000362403 112 ntBASIC1.06□□□□□ -2.24
VPS53Q5VIR6 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
VPS53Q5VIR6 RNU6-531P-201ENST00000516694 104 ntBASIC1.06□□□□□ -2.24
VPS53Q5VIR6 RNU6-158P-201ENST00000517104 100 ntBASIC1.06□□□□□ -2.24
VPS53Q5VIR6 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.06□□□□□ -2.24
VPS53Q5VIR6 MIR520E-201ENST00000384867 87 ntBASIC1.05□□□□□ -2.24
VPS53Q5VIR6 MIR548G-201ENST00000408442 89 ntBASIC1.05□□□□□ -2.24
VPS53Q5VIR6 Y_RNA.659-201ENST00000515994 113 ntBASIC1.05□□□□□ -2.24
VPS53Q5VIR6 AP003327.1-201ENST00000529684 127 ntBASIC1.05□□□□□ -2.24
VPS53Q5VIR6 MIR4500-201ENST00000579472 76 ntBASIC1.05□□□□□ -2.24
VPS53Q5VIR6 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.05□□□□□ -2.24
VPS53Q5VIR6 RNU6-90P-201ENST00000606352 106 ntBASIC1.05□□□□□ -2.24
VPS53Q5VIR6 RMST_2.1-201ENST00000617263 136 ntBASIC1.05□□□□□ -2.24
VPS53Q5VIR6 Y_RNA.93-201ENST00000363066 109 ntBASIC1.04□□□□□ -2.24
VPS53Q5VIR6 RNU6-571P-201ENST00000384128 107 ntBASIC1.04□□□□□ -2.24
VPS53Q5VIR6 MIR520F-201ENST00000384824 87 ntBASIC1.04□□□□□ -2.24
VPS53Q5VIR6 RNU1-119P-201ENST00000391122 165 ntBASIC1.04□□□□□ -2.24
VPS53Q5VIR6 AC004941.2-201ENST00000427009 228 ntBASIC1.04□□□□□ -2.24
VPS53Q5VIR6 SNRPGP12-201ENST00000449481 213 ntBASIC1.04□□□□□ -2.24
VPS53Q5VIR6 RNU7-102P-201ENST00000458948 62 ntBASIC1.04□□□□□ -2.24
VPS53Q5VIR6 RPS29P1-201ENST00000465274 159 ntBASIC1.04□□□□□ -2.24
VPS53Q5VIR6 MTND5P40-201ENST00000559945 246 ntBASIC1.04□□□□□ -2.24
VPS53Q5VIR6 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.04□□□□□ -2.24
VPS53Q5VIR6 Y_RNA.95-201ENST00000363079 95 ntBASIC1.03□□□□□ -2.24
VPS53Q5VIR6 Y_RNA.173-201ENST00000363776 113 ntBASIC1.03□□□□□ -2.24
VPS53Q5VIR6 Y_RNA.466-201ENST00000384294 113 ntBASIC1.03□□□□□ -2.24
VPS53Q5VIR6 Y_RNA.495-201ENST00000384435 112 ntBASIC1.03□□□□□ -2.24
VPS53Q5VIR6 SNORD89-201ENST00000390981 114 ntBASIC1.03□□□□□ -2.24
VPS53Q5VIR6 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.03□□□□□ -2.24
VPS53Q5VIR6 SPINT5P-201ENST00000448174 155 ntBASIC1.03□□□□□ -2.24
VPS53Q5VIR6 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.03□□□□□ -2.24
VPS53Q5VIR6 AL078603.1-201ENST00000603824 313 ntBASIC1.03□□□□□ -2.24
VPS53Q5VIR6 RNU6-170P-201ENST00000362832 104 ntBASIC1.02□□□□□ -2.25
VPS53Q5VIR6 SNORD105-201ENST00000386910 85 ntBASIC1.02□□□□□ -2.25
VPS53Q5VIR6 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.02□□□□□ -2.25
VPS53Q5VIR6 RNA5SP255-201ENST00000516370 107 ntBASIC1.02□□□□□ -2.25
VPS53Q5VIR6 AC025627.3-201ENST00000582078 182 ntBASIC1.02□□□□□ -2.25
VPS53Q5VIR6 AC013244.2-201ENST00000603396 103 ntBASIC1.02□□□□□ -2.25
VPS53Q5VIR6 AP001318.4-201ENST00000616637 121 ntBASIC1.02□□□□□ -2.25
VPS53Q5VIR6 Y_RNA.96-201ENST00000363092 109 ntBASIC1.01□□□□□ -2.25
VPS53Q5VIR6 Y_RNA.107-201ENST00000363190 121 ntBASIC1.01□□□□□ -2.25
VPS53Q5VIR6 RNU6-1163P-201ENST00000364516 107 ntBASIC1.01□□□□□ -2.25
VPS53Q5VIR6 RPL39P28-201ENST00000465655 155 ntBASIC1.01□□□□□ -2.25
VPS53Q5VIR6 RNU6-168P-201ENST00000516189 101 ntBASIC1.01□□□□□ -2.25
VPS53Q5VIR6 RNU6-109P-201ENST00000516364 107 ntBASIC1.01□□□□□ -2.25
VPS53Q5VIR6 RNU6-184P-201ENST00000516514 107 ntBASIC1.01□□□□□ -2.25
VPS53Q5VIR6 AC008608.1-201ENST00000603910 127 ntBASIC1.01□□□□□ -2.25
VPS53Q5VIR6 AC211469.2-201ENST00000605461 205 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 189.1 ms