Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.23□□□□□ -2.21
TRIM71Q2Q1W2 SNORD38.1-201ENST00000363863 68 ntBASIC1.22□□□□□ -2.21
TRIM71Q2Q1W2 RNU6-1131P-201ENST00000364955 107 ntBASIC1.22□□□□□ -2.21
TRIM71Q2Q1W2 SNORA2B-201ENST00000384583 137 ntBASIC1.22□□□□□ -2.21
TRIM71Q2Q1W2 MIR618-201ENST00000385287 98 ntBASIC1.22□□□□□ -2.21
TRIM71Q2Q1W2 MT-TF-201ENST00000387314 71 ntBASIC1.22□□□□□ -2.21
TRIM71Q2Q1W2 AC087343.1-201ENST00000477341 475 ntBASIC1.22□□□□□ -2.21
TRIM71Q2Q1W2 Y_RNA.659-201ENST00000515994 113 ntBASIC1.22□□□□□ -2.21
TRIM71Q2Q1W2 RNA5SP404-201ENST00000517118 132 ntBASIC1.22□□□□□ -2.21
TRIM71Q2Q1W2 MIR548Z-201ENST00000584743 97 ntBASIC1.22□□□□□ -2.21
TRIM71Q2Q1W2 MALAT1.1-201ENST00000618249 95 ntBASIC1.22□□□□□ -2.21
TRIM71Q2Q1W2 MIR6788-201ENST00000618842 66 ntBASIC1.22□□□□□ -2.21
TRIM71Q2Q1W2 AP001362.1-201ENST00000625165 124 ntBASIC1.22□□□□□ -2.21
TRIM71Q2Q1W2 MIR373-201ENST00000362273 69 ntBASIC1.21□□□□□ -2.22
TRIM71Q2Q1W2 Y_RNA.168-201ENST00000363740 102 ntBASIC1.21□□□□□ -2.22
TRIM71Q2Q1W2 RNY1P2-201ENST00000364820 117 ntBASIC1.21□□□□□ -2.22
TRIM71Q2Q1W2 MIR548J-201ENST00000408833 112 ntBASIC1.21□□□□□ -2.22
TRIM71Q2Q1W2 RNA5SP95-201ENST00000410319 137 ntBASIC1.21□□□□□ -2.22
TRIM71Q2Q1W2 RPS29P28-201ENST00000446439 141 ntBASIC1.21□□□□□ -2.22
TRIM71Q2Q1W2 RNU7-61P-201ENST00000515897 61 ntBASIC1.21□□□□□ -2.22
TRIM71Q2Q1W2 AC133485.1-201ENST00000567176 124 ntBASIC1.21□□□□□ -2.22
TRIM71Q2Q1W2 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
TRIM71Q2Q1W2 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
TRIM71Q2Q1W2 Y_RNA.96-201ENST00000363092 109 ntBASIC1.2□□□□□ -2.22
TRIM71Q2Q1W2 Y_RNA.220-201ENST00000364244 109 ntBASIC1.2□□□□□ -2.22
TRIM71Q2Q1W2 RNU6-1163P-201ENST00000364516 107 ntBASIC1.2□□□□□ -2.22
TRIM71Q2Q1W2 U8.15-201ENST00000390947 134 ntBASIC1.2□□□□□ -2.22
TRIM71Q2Q1W2 RNU6-644P-201ENST00000391155 98 ntBASIC1.2□□□□□ -2.22
TRIM71Q2Q1W2 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.2□□□□□ -2.22
TRIM71Q2Q1W2 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
TRIM71Q2Q1W2 HSBP1P2-201ENST00000299671 229 ntBASIC1.19□□□□□ -2.22
TRIM71Q2Q1W2 Y_RNA.290-201ENST00000364879 114 ntBASIC1.19□□□□□ -2.22
TRIM71Q2Q1W2 RNU6-294P-201ENST00000364999 102 ntBASIC1.19□□□□□ -2.22
TRIM71Q2Q1W2 Y_RNA.467-201ENST00000384297 102 ntBASIC1.19□□□□□ -2.22
TRIM71Q2Q1W2 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
TRIM71Q2Q1W2 MIR548G-201ENST00000408442 89 ntBASIC1.19□□□□□ -2.22
TRIM71Q2Q1W2 AC109327.2-201ENST00000448339 378 ntBASIC1.19□□□□□ -2.22
TRIM71Q2Q1W2 MIR18B-201ENST00000454574 71 ntBASIC1.19□□□□□ -2.22
TRIM71Q2Q1W2 RNU6-844P-201ENST00000517175 102 ntBASIC1.19□□□□□ -2.22
TRIM71Q2Q1W2 AC138749.4-201ENST00000563970 127 ntBASIC1.19□□□□□ -2.22
TRIM71Q2Q1W2 MIR151B-201ENST00000584249 96 ntBASIC1.19□□□□□ -2.22
TRIM71Q2Q1W2 SNORD113.3-201ENST00000364630 78 ntBASIC1.18□□□□□ -2.22
TRIM71Q2Q1W2 SNORD38.2-201ENST00000384470 69 ntBASIC1.18□□□□□ -2.22
TRIM71Q2Q1W2 RNY1P7-201ENST00000384743 110 ntBASIC1.18□□□□□ -2.22
TRIM71Q2Q1W2 RNU6-994P-201ENST00000410507 111 ntBASIC1.18□□□□□ -2.22
TRIM71Q2Q1W2 Y_RNA.705-201ENST00000516862 110 ntBASIC1.18□□□□□ -2.22
TRIM71Q2Q1W2 RNU6-1223P-201ENST00000517124 104 ntBASIC1.18□□□□□ -2.22
TRIM71Q2Q1W2 PVT1_3.1-201ENST00000620853 95 ntBASIC1.18□□□□□ -2.22
TRIM71Q2Q1W2 Y_RNA.173-201ENST00000363776 113 ntBASIC1.17□□□□□ -2.22
TRIM71Q2Q1W2 RNU6-972P-201ENST00000391208 107 ntBASIC1.17□□□□□ -2.22
TRIM71Q2Q1W2 MIR942-201ENST00000401111 86 ntBASIC1.17□□□□□ -2.22
TRIM71Q2Q1W2 SNORD111-201ENST00000408139 94 ntBASIC1.17□□□□□ -2.22
TRIM71Q2Q1W2 RNU6-887P-201ENST00000410660 100 ntBASIC1.17□□□□□ -2.22
TRIM71Q2Q1W2 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.17□□□□□ -2.22
TRIM71Q2Q1W2 AC036111.3-201ENST00000526389 112 ntBASIC1.17□□□□□ -2.22
TRIM71Q2Q1W2 RNU6-90P-201ENST00000606352 106 ntBASIC1.17□□□□□ -2.22
TRIM71Q2Q1W2 U7.3-201ENST00000616123 62 ntBASIC1.17□□□□□ -2.22
TRIM71Q2Q1W2 AC012676.2-201ENST00000619258 186 ntBASIC1.17□□□□□ -2.22
TRIM71Q2Q1W2 Y_RNA.558-201ENST00000384685 113 ntBASIC1.16□□□□□ -2.22
TRIM71Q2Q1W2 RNU6-813P-201ENST00000384691 107 ntBASIC1.16□□□□□ -2.22
TRIM71Q2Q1W2 SNORD114-21-201ENST00000606412 72 ntBASIC1.16□□□□□ -2.22
TRIM71Q2Q1W2 MIR6515-201ENST00000619843 57 ntBASIC1.16□□□□□ -2.22
TRIM71Q2Q1W2 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
TRIM71Q2Q1W2 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
TRIM71Q2Q1W2 RNA5SP133-201ENST00000363368 119 ntBASIC1.15□□□□□ -2.23
TRIM71Q2Q1W2 RNU6-1244P-201ENST00000363614 108 ntBASIC1.15□□□□□ -2.23
TRIM71Q2Q1W2 Y_RNA.567-201ENST00000384736 106 ntBASIC1.15□□□□□ -2.23
TRIM71Q2Q1W2 MIR19B1-201ENST00000384829 87 ntBASIC1.15□□□□□ -2.23
TRIM71Q2Q1W2 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.15□□□□□ -2.23
TRIM71Q2Q1W2 AC067940.1-201ENST00000458411 300 ntBASIC1.15□□□□□ -2.23
TRIM71Q2Q1W2 SNORD124-201ENST00000459577 104 ntBASIC1.15□□□□□ -2.23
TRIM71Q2Q1W2 OR2A41P-201ENST00000473586 105 ntBASIC1.15□□□□□ -2.23
TRIM71Q2Q1W2 RNU6-86P-201ENST00000606534 107 ntBASIC1.15□□□□□ -2.23
TRIM71Q2Q1W2 AC106800.4-201ENST00000614905 153 ntBASIC1.15□□□□□ -2.23
TRIM71Q2Q1W2 U6.109-201ENST00000636749 87 ntBASIC1.15□□□□□ -2.23
TRIM71Q2Q1W2 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.15□□□□□ -2.23
TRIM71Q2Q1W2 RNU1-124P-201ENST00000363861 145 ntBASIC1.14□□□□□ -2.23
TRIM71Q2Q1W2 Y_RNA.588-201ENST00000391254 102 ntBASIC1.14□□□□□ -2.23
TRIM71Q2Q1W2 MIR1302-4-201ENST00000408701 150 ntBASIC1.14□□□□□ -2.23
TRIM71Q2Q1W2 SPINT5P-201ENST00000448174 155 ntBASIC1.14□□□□□ -2.23
TRIM71Q2Q1W2 snoU13.21-201ENST00000459368 105 ntBASIC1.14□□□□□ -2.23
TRIM71Q2Q1W2 RNU6-162P-201ENST00000516228 103 ntBASIC1.14□□□□□ -2.23
TRIM71Q2Q1W2 AC026421.1-201ENST00000519101 163 ntBASIC1.14□□□□□ -2.23
TRIM71Q2Q1W2 AC090897.1-201ENST00000580909 226 ntBASIC1.14□□□□□ -2.23
TRIM71Q2Q1W2 MIR4491-201ENST00000581087 68 ntBASIC1.14□□□□□ -2.23
TRIM71Q2Q1W2 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.14□□□□□ -2.23
TRIM71Q2Q1W2 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.13□□□□□ -2.23
TRIM71Q2Q1W2 Y_RNA.119-201ENST00000363301 96 ntBASIC1.13□□□□□ -2.23
TRIM71Q2Q1W2 SNORD116-10-201ENST00000363791 102 ntBASIC1.13□□□□□ -2.23
TRIM71Q2Q1W2 SNORD114-24-201ENST00000365029 72 ntBASIC1.13□□□□□ -2.23
TRIM71Q2Q1W2 RNU1-36P-201ENST00000365130 165 ntBASIC1.13□□□□□ -2.23
TRIM71Q2Q1W2 SNORD58A-201ENST00000383875 65 ntBASIC1.13□□□□□ -2.23
TRIM71Q2Q1W2 MIR200A-201ENST00000384875 90 ntBASIC1.13□□□□□ -2.23
TRIM71Q2Q1W2 MIR7-2-201ENST00000384970 110 ntBASIC1.13□□□□□ -2.23
TRIM71Q2Q1W2 SNRPGP12-201ENST00000449481 213 ntBASIC1.13□□□□□ -2.23
TRIM71Q2Q1W2 RNA5SP480-201ENST00000516840 109 ntBASIC1.13□□□□□ -2.23
TRIM71Q2Q1W2 MTND5P40-201ENST00000559945 246 ntBASIC1.13□□□□□ -2.23
TRIM71Q2Q1W2 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.13□□□□□ -2.23
TRIM71Q2Q1W2 SNORD73B-201ENST00000364394 72 ntBASIC1.12□□□□□ -2.23
TRIM71Q2Q1W2 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 383.8 ms