Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 RNU6-476P-201ENST00000384726 107 ntBASIC0.73□□□□□ -2.29
EFNB3Q15768 MIR548J-201ENST00000408833 112 ntBASIC0.73□□□□□ -2.29
EFNB3Q15768 AC244098.3-201ENST00000424803 96 ntBASIC0.73□□□□□ -2.29
EFNB3Q15768 snoU13.18-201ENST00000459483 104 ntBASIC0.73□□□□□ -2.29
EFNB3Q15768 RNU6-1223P-201ENST00000517124 104 ntBASIC0.73□□□□□ -2.29
EFNB3Q15768 AC011195.1-201ENST00000578177 177 ntBASIC0.73□□□□□ -2.29
EFNB3Q15768 MIR4500-201ENST00000579472 76 ntBASIC0.73□□□□□ -2.29
EFNB3Q15768 AP001362.1-201ENST00000625165 124 ntBASIC0.73□□□□□ -2.29
EFNB3Q15768 MIR101-2-201ENST00000362195 79 ntBASIC0.72□□□□□ -2.29
EFNB3Q15768 Y_RNA.49-201ENST00000362714 112 ntBASIC0.72□□□□□ -2.29
EFNB3Q15768 SNORD38.2-201ENST00000384470 69 ntBASIC0.72□□□□□ -2.29
EFNB3Q15768 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.72□□□□□ -2.29
EFNB3Q15768 SNORD100-201ENST00000408573 76 ntBASIC0.72□□□□□ -2.29
EFNB3Q15768 RNU6-733P-201ENST00000410759 104 ntBASIC0.72□□□□□ -2.29
EFNB3Q15768 AC004941.2-201ENST00000427009 228 ntBASIC0.72□□□□□ -2.29
EFNB3Q15768 AC002350.1-201ENST00000490759 375 ntBASIC0.72□□□□□ -2.29
EFNB3Q15768 RNU6-531P-201ENST00000516694 104 ntBASIC0.72□□□□□ -2.29
EFNB3Q15768 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.72□□□□□ -2.29
EFNB3Q15768 MIR4653-201ENST00000585107 83 ntBASIC0.72□□□□□ -2.29
EFNB3Q15768 RNA5SP117-201ENST00000365294 118 ntBASIC0.71□□□□□ -2.3
EFNB3Q15768 RNU6-110P-201ENST00000384508 104 ntBASIC0.71□□□□□ -2.3
EFNB3Q15768 RNU6-429P-201ENST00000384582 108 ntBASIC0.71□□□□□ -2.3
EFNB3Q15768 Y_RNA.549-201ENST00000384657 102 ntBASIC0.71□□□□□ -2.3
EFNB3Q15768 MIR548I2-201ENST00000408348 149 ntBASIC0.71□□□□□ -2.3
EFNB3Q15768 Y_RNA.697-201ENST00000516776 113 ntBASIC0.71□□□□□ -2.3
EFNB3Q15768 CYP3A137P-201ENST00000562436 69 ntBASIC0.71□□□□□ -2.3
EFNB3Q15768 MIR3612-201ENST00000579753 87 ntBASIC0.71□□□□□ -2.3
EFNB3Q15768 AC013244.2-201ENST00000603396 103 ntBASIC0.71□□□□□ -2.3
EFNB3Q15768 Y_RNA.35-201ENST00000362601 101 ntBASIC0.7□□□□□ -2.3
EFNB3Q15768 Y_RNA.360-201ENST00000365512 102 ntBASIC0.7□□□□□ -2.3
EFNB3Q15768 MIR605-201ENST00000385078 83 ntBASIC0.7□□□□□ -2.3
EFNB3Q15768 RNU6-1307P-201ENST00000391012 103 ntBASIC0.7□□□□□ -2.3
EFNB3Q15768 AC068339.1-201ENST00000526965 141 ntBASIC0.7□□□□□ -2.3
EFNB3Q15768 MIR4698-201ENST00000577795 80 ntBASIC0.7□□□□□ -2.3
EFNB3Q15768 MIR376B-201ENST00000614515 100 ntBASIC0.7□□□□□ -2.3
EFNB3Q15768 AL035470.1-201ENST00000622571 220 ntBASIC0.7□□□□□ -2.3
EFNB3Q15768 SNORD114-2-201ENST00000363953 78 ntBASIC0.69□□□□□ -2.3
EFNB3Q15768 Y_RNA.273-201ENST00000364703 102 ntBASIC0.69□□□□□ -2.3
EFNB3Q15768 MIR34C-201ENST00000384831 77 ntBASIC0.69□□□□□ -2.3
EFNB3Q15768 RNU6-351P-201ENST00000516097 100 ntBASIC0.69□□□□□ -2.3
EFNB3Q15768 RNU6-1018P-201ENST00000516577 106 ntBASIC0.69□□□□□ -2.3
EFNB3Q15768 MIR6734-201ENST00000621166 68 ntBASIC0.69□□□□□ -2.3
EFNB3Q15768 Y_RNA.174-201ENST00000363781 105 ntBASIC0.68□□□□□ -2.3
EFNB3Q15768 Y_RNA.281-201ENST00000364774 94 ntBASIC0.68□□□□□ -2.3
EFNB3Q15768 Y_RNA.291-201ENST00000364886 113 ntBASIC0.68□□□□□ -2.3
EFNB3Q15768 Y_RNA.536-201ENST00000384621 113 ntBASIC0.68□□□□□ -2.3
EFNB3Q15768 RNU6-535P-201ENST00000384722 107 ntBASIC0.68□□□□□ -2.3
EFNB3Q15768 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
EFNB3Q15768 Y_RNA.629-201ENST00000411368 105 ntBASIC0.68□□□□□ -2.3
EFNB3Q15768 AL606490.4-201ENST00000423117 127 ntBASIC0.68□□□□□ -2.3
EFNB3Q15768 MTND5P40-201ENST00000559945 246 ntBASIC0.68□□□□□ -2.3
EFNB3Q15768 MIR5009-201ENST00000578736 100 ntBASIC0.68□□□□□ -2.3
EFNB3Q15768 AC022709.1-201ENST00000615967 87 ntBASIC0.68□□□□□ -2.3
EFNB3Q15768 HSBP1P2-201ENST00000299671 229 ntBASIC0.67□□□□□ -2.3
EFNB3Q15768 RNU6-1313P-201ENST00000362622 102 ntBASIC0.67□□□□□ -2.3
EFNB3Q15768 MIR146A-201ENST00000385201 99 ntBASIC0.67□□□□□ -2.3
EFNB3Q15768 RNU6-679P-201ENST00000391003 106 ntBASIC0.67□□□□□ -2.3
EFNB3Q15768 RNA5SP222-201ENST00000411039 105 ntBASIC0.67□□□□□ -2.3
EFNB3Q15768 MIR548H5-201ENST00000580314 60 ntBASIC0.67□□□□□ -2.3
EFNB3Q15768 AC096720.1-201ENST00000604441 183 ntBASIC0.67□□□□□ -2.3
EFNB3Q15768 RNU7-10P-201ENST00000607194 63 ntBASIC0.67□□□□□ -2.3
EFNB3Q15768 MIR6129-201ENST00000616087 109 ntBASIC0.67□□□□□ -2.3
EFNB3Q15768 MIR18A-201ENST00000362310 71 ntBASIC0.66□□□□□ -2.3
EFNB3Q15768 Y_RNA.56-201ENST00000362798 112 ntBASIC0.66□□□□□ -2.3
EFNB3Q15768 RNU6-1290P-201ENST00000362957 109 ntBASIC0.66□□□□□ -2.3
EFNB3Q15768 Y_RNA.118-201ENST00000363300 101 ntBASIC0.66□□□□□ -2.3
EFNB3Q15768 RNU6-1107P-201ENST00000364817 104 ntBASIC0.66□□□□□ -2.3
EFNB3Q15768 U8.6-201ENST00000364939 135 ntBASIC0.66□□□□□ -2.3
EFNB3Q15768 MIR5000-201ENST00000577717 103 ntBASIC0.66□□□□□ -2.3
EFNB3Q15768 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.66□□□□□ -2.3
EFNB3Q15768 SNORD38.1-201ENST00000363863 68 ntBASIC0.65□□□□□ -2.31
EFNB3Q15768 RNU6-291P-201ENST00000384720 107 ntBASIC0.65□□□□□ -2.31
EFNB3Q15768 SPINT5P-201ENST00000448174 155 ntBASIC0.65□□□□□ -2.31
EFNB3Q15768 RNU6-469P-201ENST00000516253 101 ntBASIC0.65□□□□□ -2.31
EFNB3Q15768 RNU6-135P-201ENST00000516769 101 ntBASIC0.65□□□□□ -2.31
EFNB3Q15768 AL442128.1-201ENST00000615151 90 ntBASIC0.65□□□□□ -2.31
EFNB3Q15768 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.65□□□□□ -2.31
EFNB3Q15768 MIR6866-201ENST00000638146 69 ntBASIC0.65□□□□□ -2.31
EFNB3Q15768 RNU6-1014P-201ENST00000383940 103 ntBASIC0.64□□□□□ -2.31
EFNB3Q15768 MIR635-201ENST00000384830 98 ntBASIC0.64□□□□□ -2.31
EFNB3Q15768 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.64□□□□□ -2.31
EFNB3Q15768 BX276092.1-201ENST00000427368 251 ntBASIC0.64□□□□□ -2.31
EFNB3Q15768 RNU6-90P-201ENST00000606352 106 ntBASIC0.64□□□□□ -2.31
EFNB3Q15768 uc_338.16-201ENST00000621804 95 ntBASIC0.64□□□□□ -2.31
EFNB3Q15768 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
EFNB3Q15768 Y_RNA.32-201ENST00000362589 110 ntBASIC0.63□□□□□ -2.31
EFNB3Q15768 RNU6-1325P-201ENST00000364905 105 ntBASIC0.63□□□□□ -2.31
EFNB3Q15768 Y_RNA.323-201ENST00000365157 109 ntBASIC0.63□□□□□ -2.31
EFNB3Q15768 SNORA36.2-201ENST00000384004 127 ntBASIC0.63□□□□□ -2.31
EFNB3Q15768 RNU6-1201P-201ENST00000384227 107 ntBASIC0.63□□□□□ -2.31
EFNB3Q15768 MIR489-201ENST00000384923 84 ntBASIC0.63□□□□□ -2.31
EFNB3Q15768 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.63□□□□□ -2.31
EFNB3Q15768 SNORA31.14-201ENST00000516728 116 ntBASIC0.63□□□□□ -2.31
EFNB3Q15768 AC141557.1-201ENST00000540982 400 ntBASIC0.63□□□□□ -2.31
EFNB3Q15768 MIR4694-201ENST00000578534 80 ntBASIC0.63□□□□□ -2.31
EFNB3Q15768 MIR6835-201ENST00000621552 64 ntBASIC0.63□□□□□ -2.31
EFNB3Q15768 RNU6-832P-201ENST00000363319 107 ntBASIC0.62□□□□□ -2.31
EFNB3Q15768 RNU4-36P-201ENST00000364294 144 ntBASIC0.62□□□□□ -2.31
EFNB3Q15768 MIR140-201ENST00000385282 100 ntBASIC0.62□□□□□ -2.31
EFNB3Q15768 MIR1302-5-201ENST00000408164 150 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 246.1 ms