Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
CKAP4Q07065 RNU6-679P-201ENST00000391003 106 ntBASIC0.38□□□□□ -2.35
CKAP4Q07065 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.38□□□□□ -2.35
CKAP4Q07065 AC244505.6-201ENST00000452829 130 ntBASIC0.38□□□□□ -2.35
CKAP4Q07065 SNORD33.1-201ENST00000516213 88 ntBASIC0.38□□□□□ -2.35
CKAP4Q07065 RNU6-1006P-201ENST00000516998 103 ntBASIC0.38□□□□□ -2.35
CKAP4Q07065 AC007012.1-201ENST00000567192 175 ntBASIC0.38□□□□□ -2.35
CKAP4Q07065 MIR4500-201ENST00000579472 76 ntBASIC0.38□□□□□ -2.35
CKAP4Q07065 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.38□□□□□ -2.35
CKAP4Q07065 AL162726.3-218ENST00000636401 95 ntBASIC0.38□□□□□ -2.35
CKAP4Q07065 AC132825.6-201ENST00000638861 357 ntBASIC0.38□□□□□ -2.35
CKAP4Q07065 RNA5SP432-201ENST00000362480 116 ntBASIC0.37□□□□□ -2.35
CKAP4Q07065 Y_RNA.261-201ENST00000364631 102 ntBASIC0.37□□□□□ -2.35
CKAP4Q07065 MIR548I2-201ENST00000408348 149 ntBASIC0.37□□□□□ -2.35
CKAP4Q07065 AC092628.1-201ENST00000436250 252 ntBASIC0.37□□□□□ -2.35
CKAP4Q07065 SNRPGP12-201ENST00000449481 213 ntBASIC0.37□□□□□ -2.35
CKAP4Q07065 RN7SKP12-201ENST00000516275 143 ntBASIC0.37□□□□□ -2.35
CKAP4Q07065 RNU6-229P-201ENST00000516614 102 ntBASIC0.37□□□□□ -2.35
CKAP4Q07065 RNA5SP94-201ENST00000516917 108 ntBASIC0.37□□□□□ -2.35
CKAP4Q07065 MIR548H5-201ENST00000580314 60 ntBASIC0.37□□□□□ -2.35
CKAP4Q07065 AL035470.1-201ENST00000622571 220 ntBASIC0.37□□□□□ -2.35
CKAP4Q07065 SNORA63.5-201ENST00000363548 123 ntBASIC0.36□□□□□ -2.35
CKAP4Q07065 RNU6-409P-201ENST00000384114 104 ntBASIC0.36□□□□□ -2.35
CKAP4Q07065 RNU6-571P-201ENST00000384128 107 ntBASIC0.36□□□□□ -2.35
CKAP4Q07065 RNU6-22P-201ENST00000384355 107 ntBASIC0.36□□□□□ -2.35
CKAP4Q07065 Y_RNA.507-201ENST00000384500 99 ntBASIC0.36□□□□□ -2.35
CKAP4Q07065 RNU6-1117P-201ENST00000384525 104 ntBASIC0.36□□□□□ -2.35
CKAP4Q07065 Y_RNA.549-201ENST00000384657 102 ntBASIC0.36□□□□□ -2.35
CKAP4Q07065 MIR519A1-201ENST00000385257 85 ntBASIC0.36□□□□□ -2.35
CKAP4Q07065 RNU6-816P-201ENST00000390914 107 ntBASIC0.36□□□□□ -2.35
CKAP4Q07065 RNU6-1268P-201ENST00000391214 107 ntBASIC0.36□□□□□ -2.35
CKAP4Q07065 RNU6-1239P-201ENST00000391310 107 ntBASIC0.36□□□□□ -2.35
CKAP4Q07065 MIR1912-201ENST00000410389 80 ntBASIC0.36□□□□□ -2.35
CKAP4Q07065 RNU6-237P-201ENST00000515985 71 ntBASIC0.36□□□□□ -2.35
CKAP4Q07065 RNU6-469P-201ENST00000516253 101 ntBASIC0.36□□□□□ -2.35
CKAP4Q07065 RNA5SP47-201ENST00000517230 109 ntBASIC0.36□□□□□ -2.35
CKAP4Q07065 MIR4639-201ENST00000584938 69 ntBASIC0.36□□□□□ -2.35
CKAP4Q07065 AL670379.3-201ENST00000605040 251 ntBASIC0.36□□□□□ -2.35
CKAP4Q07065 RNU7-10P-201ENST00000607194 63 ntBASIC0.36□□□□□ -2.35
CKAP4Q07065 AL365222.1-201ENST00000614661 98 ntBASIC0.36□□□□□ -2.35
CKAP4Q07065 MIR6828-201ENST00000636181 60 ntBASIC0.36□□□□□ -2.35
CKAP4Q07065 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.35□□□□□ -2.35
CKAP4Q07065 Y_RNA.116-201ENST00000363292 103 ntBASIC0.35□□□□□ -2.35
CKAP4Q07065 SNORA36.1-201ENST00000363424 132 ntBASIC0.35□□□□□ -2.35
CKAP4Q07065 RNA5SP205-201ENST00000364653 136 ntBASIC0.35□□□□□ -2.35
CKAP4Q07065 RNA5SP517-201ENST00000364724 117 ntBASIC0.35□□□□□ -2.35
CKAP4Q07065 Y_RNA.309-201ENST00000365046 111 ntBASIC0.35□□□□□ -2.35
CKAP4Q07065 SNORD28-201ENST00000384706 75 ntBASIC0.35□□□□□ -2.35
CKAP4Q07065 MIR548A1-201ENST00000385041 97 ntBASIC0.35□□□□□ -2.35
CKAP4Q07065 MIR548A3-201ENST00000385297 97 ntBASIC0.35□□□□□ -2.35
CKAP4Q07065 RNU6-1168P-201ENST00000390831 104 ntBASIC0.35□□□□□ -2.35
CKAP4Q07065 SNORA7.5-201ENST00000410672 110 ntBASIC0.35□□□□□ -2.35
CKAP4Q07065 BX276092.1-201ENST00000427368 251 ntBASIC0.35□□□□□ -2.35
CKAP4Q07065 TRAJ51-201ENST00000504127 63 ntBASIC0.35□□□□□ -2.35
CKAP4Q07065 RNU6-479P-201ENST00000516348 105 ntBASIC0.35□□□□□ -2.35
CKAP4Q07065 AC138869.1-201ENST00000568623 124 ntBASIC0.35□□□□□ -2.35
CKAP4Q07065 MIR4298-201ENST00000584380 73 ntBASIC0.35□□□□□ -2.35
CKAP4Q07065 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.35
CKAP4Q07065 Y_RNA.155-201ENST00000363632 101 ntBASIC0.34□□□□□ -2.36
CKAP4Q07065 Y_RNA.281-201ENST00000364774 94 ntBASIC0.34□□□□□ -2.36
CKAP4Q07065 Y_RNA.377-201ENST00000365644 108 ntBASIC0.34□□□□□ -2.36
CKAP4Q07065 SNORA50A-201ENST00000384225 134 ntBASIC0.34□□□□□ -2.36
CKAP4Q07065 RNU6-1201P-201ENST00000384227 107 ntBASIC0.34□□□□□ -2.36
CKAP4Q07065 SNORA8.2-201ENST00000384372 139 ntBASIC0.34□□□□□ -2.36
CKAP4Q07065 MIR635-201ENST00000384830 98 ntBASIC0.34□□□□□ -2.36
CKAP4Q07065 AC098934.3-201ENST00000430450 190 ntBASIC0.34□□□□□ -2.36
CKAP4Q07065 RNU6-406P-201ENST00000516470 107 ntBASIC0.34□□□□□ -2.36
CKAP4Q07065 RNU6-62P-201ENST00000516526 102 ntBASIC0.34□□□□□ -2.36
CKAP4Q07065 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.34□□□□□ -2.36
CKAP4Q07065 AC092634.7-201ENST00000621022 103 ntBASIC0.34□□□□□ -2.36
CKAP4Q07065 MIR5087-201ENST00000635826 76 ntBASIC0.34□□□□□ -2.36
CKAP4Q07065 SNORD118-201ENST00000363593 134 ntBASIC0.33□□□□□ -2.36
CKAP4Q07065 SNORD38.1-201ENST00000363863 68 ntBASIC0.33□□□□□ -2.36
CKAP4Q07065 Y_RNA.247-201ENST00000364500 92 ntBASIC0.33□□□□□ -2.36
CKAP4Q07065 SNORD38.2-201ENST00000384470 69 ntBASIC0.33□□□□□ -2.36
CKAP4Q07065 Y_RNA.567-201ENST00000384736 106 ntBASIC0.33□□□□□ -2.36
CKAP4Q07065 RNU6-850P-201ENST00000516934 103 ntBASIC0.33□□□□□ -2.36
CKAP4Q07065 RNU6-789P-201ENST00000517105 102 ntBASIC0.33□□□□□ -2.36
CKAP4Q07065 SCARNA16.5-201ENST00000517114 183 ntBASIC0.33□□□□□ -2.36
CKAP4Q07065 AC068339.1-201ENST00000526965 141 ntBASIC0.33□□□□□ -2.36
CKAP4Q07065 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.33□□□□□ -2.36
CKAP4Q07065 MIR4694-201ENST00000578534 80 ntBASIC0.33□□□□□ -2.36
CKAP4Q07065 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.33□□□□□ -2.36
CKAP4Q07065 AL512310.12-203ENST00000640543 90 ntBASIC0.33□□□□□ -2.36
CKAP4Q07065 RNU6-834P-201ENST00000362367 110 ntBASIC0.32□□□□□ -2.36
CKAP4Q07065 Y_RNA.35-201ENST00000362601 101 ntBASIC0.32□□□□□ -2.36
CKAP4Q07065 RNU6-170P-201ENST00000362832 104 ntBASIC0.32□□□□□ -2.36
CKAP4Q07065 Y_RNA.173-201ENST00000363776 113 ntBASIC0.32□□□□□ -2.36
CKAP4Q07065 U8.6-201ENST00000364939 135 ntBASIC0.32□□□□□ -2.36
CKAP4Q07065 Y_RNA.323-201ENST00000365157 109 ntBASIC0.32□□□□□ -2.36
CKAP4Q07065 MIR518A1-201ENST00000385068 85 ntBASIC0.32□□□□□ -2.36
CKAP4Q07065 MIR577-201ENST00000385196 96 ntBASIC0.32□□□□□ -2.36
CKAP4Q07065 SNORD63B-201ENST00000411005 70 ntBASIC0.32□□□□□ -2.36
CKAP4Q07065 SNORA40.8-201ENST00000411034 126 ntBASIC0.32□□□□□ -2.36
CKAP4Q07065 AL603825.1-201ENST00000438481 80 ntBASIC0.32□□□□□ -2.36
CKAP4Q07065 AC097635.1-201ENST00000450678 155 ntBASIC0.32□□□□□ -2.36
CKAP4Q07065 MIR5009-201ENST00000578736 100 ntBASIC0.32□□□□□ -2.36
CKAP4Q07065 AL442128.1-201ENST00000615151 90 ntBASIC0.32□□□□□ -2.36
CKAP4Q07065 AC244669.1-204ENST00000621564 178 ntBASIC0.32□□□□□ -2.36
CKAP4Q07065 RNU6-1260P-201ENST00000362944 107 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms