Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 Y_RNA.93-201ENST00000363066 109 ntBASIC1.08□□□□□ -2.24
LTBQ06643 RNU6-1255P-201ENST00000363434 112 ntBASIC1.08□□□□□ -2.24
LTBQ06643 SNORD113.3-201ENST00000364630 78 ntBASIC1.08□□□□□ -2.24
LTBQ06643 MIR488-201ENST00000365739 83 ntBASIC1.08□□□□□ -2.24
LTBQ06643 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
LTBQ06643 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.08□□□□□ -2.24
LTBQ06643 AC109327.2-201ENST00000448339 378 ntBASIC1.08□□□□□ -2.24
LTBQ06643 Y_RNA.659-201ENST00000515994 113 ntBASIC1.08□□□□□ -2.24
LTBQ06643 SNORD79.1-201ENST00000516069 84 ntBASIC1.08□□□□□ -2.24
LTBQ06643 AC023827.1-201ENST00000569247 97 ntBASIC1.08□□□□□ -2.24
LTBQ06643 MIR5000-201ENST00000577717 103 ntBASIC1.08□□□□□ -2.24
LTBQ06643 MIR5582-201ENST00000579697 68 ntBASIC1.08□□□□□ -2.24
LTBQ06643 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.08□□□□□ -2.24
LTBQ06643 Y_RNA.107-201ENST00000363190 121 ntBASIC1.07□□□□□ -2.24
LTBQ06643 RNY1P2-201ENST00000364820 117 ntBASIC1.07□□□□□ -2.24
LTBQ06643 MT-TF-201ENST00000387314 71 ntBASIC1.07□□□□□ -2.24
LTBQ06643 RNU6-644P-201ENST00000391155 98 ntBASIC1.07□□□□□ -2.24
LTBQ06643 SNORD83.1-201ENST00000411362 77 ntBASIC1.07□□□□□ -2.24
LTBQ06643 AL591704.2-201ENST00000421658 181 ntBASIC1.07□□□□□ -2.24
LTBQ06643 RPS29P28-201ENST00000446439 141 ntBASIC1.07□□□□□ -2.24
LTBQ06643 MIR18B-201ENST00000454574 71 ntBASIC1.07□□□□□ -2.24
LTBQ06643 RNU6-158P-201ENST00000517104 100 ntBASIC1.07□□□□□ -2.24
LTBQ06643 AC133485.1-201ENST00000567176 124 ntBASIC1.07□□□□□ -2.24
LTBQ06643 AC012676.2-201ENST00000619258 186 ntBASIC1.07□□□□□ -2.24
LTBQ06643 AP001362.1-201ENST00000625165 124 ntBASIC1.07□□□□□ -2.24
LTBQ06643 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
LTBQ06643 RNA5SP327-201ENST00000362494 101 ntBASIC1.06□□□□□ -2.24
LTBQ06643 Y_RNA.43-201ENST00000362670 111 ntBASIC1.06□□□□□ -2.24
LTBQ06643 Y_RNA.95-201ENST00000363079 95 ntBASIC1.06□□□□□ -2.24
LTBQ06643 SNORD38.1-201ENST00000363863 68 ntBASIC1.06□□□□□ -2.24
LTBQ06643 RNU6-1163P-201ENST00000364516 107 ntBASIC1.06□□□□□ -2.24
LTBQ06643 RNU6-1131P-201ENST00000364955 107 ntBASIC1.06□□□□□ -2.24
LTBQ06643 RNU6-49P-201ENST00000384256 107 ntBASIC1.06□□□□□ -2.24
LTBQ06643 Y_RNA.467-201ENST00000384297 102 ntBASIC1.06□□□□□ -2.24
LTBQ06643 SNORA80D-201ENST00000384488 135 ntBASIC1.06□□□□□ -2.24
LTBQ06643 MIR193B-201ENST00000384907 83 ntBASIC1.06□□□□□ -2.24
LTBQ06643 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.06□□□□□ -2.24
LTBQ06643 MIR1285-1-201ENST00000408593 84 ntBASIC1.06□□□□□ -2.24
LTBQ06643 SNORD93-201ENST00000408813 74 ntBASIC1.06□□□□□ -2.24
LTBQ06643 AC004941.2-201ENST00000427009 228 ntBASIC1.06□□□□□ -2.24
LTBQ06643 RNU7-61P-201ENST00000515897 61 ntBASIC1.06□□□□□ -2.24
LTBQ06643 AC096720.1-201ENST00000604441 183 ntBASIC1.06□□□□□ -2.24
LTBQ06643 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.06□□□□□ -2.24
LTBQ06643 U6.109-201ENST00000636749 87 ntBASIC1.06□□□□□ -2.24
LTBQ06643 AC008163.1-202ENST00000636004 2889 ntBASIC1.05□□□□□ -2.24
LTBQ06643 Y_RNA.119-201ENST00000363301 96 ntBASIC1.05□□□□□ -2.24
LTBQ06643 RNA5SP133-201ENST00000363368 119 ntBASIC1.05□□□□□ -2.24
LTBQ06643 RNA5SP457-201ENST00000363657 124 ntBASIC1.05□□□□□ -2.24
LTBQ06643 SNORD45B-201ENST00000364617 72 ntBASIC1.05□□□□□ -2.24
LTBQ06643 Y_RNA.342-201ENST00000365352 113 ntBASIC1.05□□□□□ -2.24
LTBQ06643 Y_RNA.433-201ENST00000384089 102 ntBASIC1.05□□□□□ -2.24
LTBQ06643 MIR150-201ENST00000385048 84 ntBASIC1.05□□□□□ -2.24
LTBQ06643 Y_RNA.588-201ENST00000391254 102 ntBASIC1.05□□□□□ -2.24
LTBQ06643 AC087343.1-201ENST00000477341 475 ntBASIC1.05□□□□□ -2.24
LTBQ06643 Y_RNA.681-201ENST00000516445 113 ntBASIC1.05□□□□□ -2.24
LTBQ06643 SNORA25.16-201ENST00000516741 121 ntBASIC1.05□□□□□ -2.24
LTBQ06643 SNORA70.22-201ENST00000517160 124 ntBASIC1.05□□□□□ -2.24
LTBQ06643 MIR4491-201ENST00000581087 68 ntBASIC1.05□□□□□ -2.24
LTBQ06643 AC106800.4-201ENST00000614905 153 ntBASIC1.05□□□□□ -2.24
LTBQ06643 AC023934.1-201ENST00000574529 2389 ntBASIC1.04□□□□□ -2.24
LTBQ06643 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.04□□□□□ -2.24
LTBQ06643 RNU1-36P-201ENST00000365130 165 ntBASIC1.04□□□□□ -2.24
LTBQ06643 RNU6-934P-201ENST00000365154 107 ntBASIC1.04□□□□□ -2.24
LTBQ06643 RNY1P7-201ENST00000384743 110 ntBASIC1.04□□□□□ -2.24
LTBQ06643 MIR618-201ENST00000385287 98 ntBASIC1.04□□□□□ -2.24
LTBQ06643 MIR548G-201ENST00000408442 89 ntBASIC1.04□□□□□ -2.24
LTBQ06643 SPINT5P-201ENST00000448174 155 ntBASIC1.04□□□□□ -2.24
LTBQ06643 RNU7-185P-201ENST00000459215 60 ntBASIC1.04□□□□□ -2.24
LTBQ06643 RNU6-162P-201ENST00000516228 103 ntBASIC1.04□□□□□ -2.24
LTBQ06643 MIR1273G-201ENST00000577677 100 ntBASIC1.04□□□□□ -2.24
LTBQ06643 MIR4500-201ENST00000579472 76 ntBASIC1.04□□□□□ -2.24
LTBQ06643 AC090897.1-201ENST00000580909 226 ntBASIC1.04□□□□□ -2.24
LTBQ06643 MIR4295-201ENST00000585286 85 ntBASIC1.04□□□□□ -2.24
LTBQ06643 AC020891.4-201ENST00000605745 93 ntBASIC1.04□□□□□ -2.24
LTBQ06643 RNU6-86P-201ENST00000606534 107 ntBASIC1.04□□□□□ -2.24
LTBQ06643 SNORD111-201ENST00000408139 94 ntBASIC1.03□□□□□ -2.24
LTBQ06643 RNU7-90P-201ENST00000459216 62 ntBASIC1.03□□□□□ -2.24
LTBQ06643 RNU7-40P-201ENST00000516397 64 ntBASIC1.03□□□□□ -2.24
LTBQ06643 AC019288.1-201ENST00000557918 224 ntBASIC1.03□□□□□ -2.24
LTBQ06643 MIR4771-2-201ENST00000577758 74 ntBASIC1.03□□□□□ -2.24
LTBQ06643 MIR4771-1-201ENST00000582617 74 ntBASIC1.03□□□□□ -2.24
LTBQ06643 RNU6-90P-201ENST00000606352 106 ntBASIC1.03□□□□□ -2.24
LTBQ06643 MALAT1.1-201ENST00000618249 95 ntBASIC1.03□□□□□ -2.24
LTBQ06643 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.03□□□□□ -2.24
LTBQ06643 MIR2052-201ENST00000636055 55 ntBASIC1.03□□□□□ -2.24
LTBQ06643 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.25
LTBQ06643 HSBP1P2-201ENST00000299671 229 ntBASIC1.02□□□□□ -2.25
LTBQ06643 RNU6-369P-201ENST00000362515 102 ntBASIC1.02□□□□□ -2.25
LTBQ06643 RNU6-403P-201ENST00000363163 104 ntBASIC1.02□□□□□ -2.25
LTBQ06643 Y_RNA.173-201ENST00000363776 113 ntBASIC1.02□□□□□ -2.25
LTBQ06643 Y_RNA.290-201ENST00000364879 114 ntBASIC1.02□□□□□ -2.25
LTBQ06643 Y_RNA.369-201ENST00000365568 117 ntBASIC1.02□□□□□ -2.25
LTBQ06643 RNU6-939P-201ENST00000384634 107 ntBASIC1.02□□□□□ -2.25
LTBQ06643 AC002429.1-201ENST00000437672 148 ntBASIC1.02□□□□□ -2.25
LTBQ06643 RNU6-531P-201ENST00000516694 104 ntBASIC1.02□□□□□ -2.25
LTBQ06643 MTND5P40-201ENST00000559945 246 ntBASIC1.02□□□□□ -2.25
LTBQ06643 U7.3-201ENST00000616123 62 ntBASIC1.02□□□□□ -2.25
LTBQ06643 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
LTBQ06643 Y_RNA.115-201ENST00000363272 98 ntBASIC1.01□□□□□ -2.25
LTBQ06643 SNORA25.8-201ENST00000364831 128 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 256 ms