Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AL021368.1-201ENST00000607490 540 ntBASIC-0.87□□□□□ -2.55
HSPG2P98160 RNU6-80P-201ENST00000384195 107 ntBASIC-0.88□□□□□ -2.55
HSPG2P98160 RNU6-21P-201ENST00000384710 107 ntBASIC-0.88□□□□□ -2.55
HSPG2P98160 MIR521-2-201ENST00000384818 87 ntBASIC-0.88□□□□□ -2.55
HSPG2P98160 RNU6-1156P-201ENST00000410365 100 ntBASIC-0.88□□□□□ -2.55
HSPG2P98160 RNU4-88P-201ENST00000411220 86 ntBASIC-0.88□□□□□ -2.55
HSPG2P98160 ELOCP20-201ENST00000422460 345 ntBASIC-0.88□□□□□ -2.55
HSPG2P98160 SEPT14P8-201ENST00000508026 178 ntBASIC-0.88□□□□□ -2.55
HSPG2P98160 AP003461.1-201ENST00000528866 78 ntBASIC-0.88□□□□□ -2.55
HSPG2P98160 AL365265.1-201ENST00000621045 234 ntBASIC-0.88□□□□□ -2.55
HSPG2P98160 Y_RNA.248-201ENST00000364501 109 ntBASIC-0.88□□□□□ -2.55
HSPG2P98160 RNU6-987P-201ENST00000384759 104 ntBASIC-0.88□□□□□ -2.55
HSPG2P98160 MIR2053-201ENST00000459295 91 ntBASIC-0.88□□□□□ -2.55
HSPG2P98160 RNU6-864P-201ENST00000516256 108 ntBASIC-0.88□□□□□ -2.55
HSPG2P98160 Y_RNA.570-201ENST00000384750 101 ntBASIC-0.88□□□□□ -2.55
HSPG2P98160 MIR519A2-201ENST00000384990 87 ntBASIC-0.88□□□□□ -2.55
HSPG2P98160 RNU6-1000P-201ENST00000391066 106 ntBASIC-0.88□□□□□ -2.55
HSPG2P98160 MTND2P39-201ENST00000457230 764 ntBASIC-0.88□□□□□ -2.55
HSPG2P98160 Y_RNA.655-201ENST00000515919 96 ntBASIC-0.88□□□□□ -2.55
HSPG2P98160 RNU7-154P-201ENST00000516194 62 ntBASIC-0.88□□□□□ -2.55
HSPG2P98160 AC120024.2-201ENST00000576526 175 ntBASIC-0.88□□□□□ -2.55
HSPG2P98160 AC005014.2-201ENST00000607795 599 ntBASIC-0.88□□□□□ -2.55
HSPG2P98160 AC013791.1-201ENST00000616619 62 ntBASIC-0.88□□□□□ -2.55
HSPG2P98160 Y_RNA.781-201ENST00000620301 103 ntBASIC-0.88□□□□□ -2.55
HSPG2P98160 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.89□□□□□ -2.55
HSPG2P98160 Y_RNA.182-201ENST00000363880 111 ntBASIC-0.89□□□□□ -2.55
HSPG2P98160 RNU6-647P-201ENST00000364243 107 ntBASIC-0.89□□□□□ -2.55
HSPG2P98160 Y_RNA.501-201ENST00000384467 103 ntBASIC-0.89□□□□□ -2.55
HSPG2P98160 MIR548G-201ENST00000408442 89 ntBASIC-0.89□□□□□ -2.55
HSPG2P98160 RNU6-1016P-201ENST00000516689 94 ntBASIC-0.89□□□□□ -2.55
HSPG2P98160 ZNF519P2-201ENST00000557032 169 ntBASIC-0.89□□□□□ -2.55
HSPG2P98160 AL022161.1-201ENST00000604390 213 ntBASIC-0.89□□□□□ -2.55
HSPG2P98160 RNU4-24P-201ENST00000364565 139 ntBASIC-0.89□□□□□ -2.55
HSPG2P98160 SNORD116-11-201ENST00000383882 92 ntBASIC-0.89□□□□□ -2.55
HSPG2P98160 MIR451A-201ENST00000385059 72 ntBASIC-0.89□□□□□ -2.55
HSPG2P98160 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.89□□□□□ -2.55
HSPG2P98160 AC019235.1-201ENST00000503847 207 ntBASIC-0.89□□□□□ -2.55
HSPG2P98160 RNU7-2P-201ENST00000516096 62 ntBASIC-0.89□□□□□ -2.55
HSPG2P98160 RNU6-1213P-201ENST00000517075 94 ntBASIC-0.89□□□□□ -2.55
HSPG2P98160 C8orf59P2-201ENST00000603441 271 ntBASIC-0.89□□□□□ -2.55
HSPG2P98160 SNX3P1Y-201ENST00000615757 176 ntBASIC-0.89□□□□□ -2.55
HSPG2P98160 FGF7P2-201ENST00000332473 296 ntBASIC-0.89□□□□□ -2.55
HSPG2P98160 Y_RNA.441-201ENST00000384123 112 ntBASIC-0.89□□□□□ -2.55
HSPG2P98160 Y_RNA.481-201ENST00000384373 102 ntBASIC-0.89□□□□□ -2.55
HSPG2P98160 AC009161.1-201ENST00000417306 376 ntBASIC-0.89□□□□□ -2.55
HSPG2P98160 AC107399.1-201ENST00000451226 265 ntBASIC-0.89□□□□□ -2.55
HSPG2P98160 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.89□□□□□ -2.55
HSPG2P98160 SNORD115-19-201ENST00000363098 82 ntBASIC-0.89□□□□□ -2.55
HSPG2P98160 RNU6-774P-201ENST00000363238 107 ntBASIC-0.89□□□□□ -2.55
HSPG2P98160 SNORD115-18-201ENST00000363293 82 ntBASIC-0.89□□□□□ -2.55
HSPG2P98160 SNORD115-22-201ENST00000364456 82 ntBASIC-0.89□□□□□ -2.55
HSPG2P98160 SNORD115-17-201ENST00000364612 82 ntBASIC-0.89□□□□□ -2.55
HSPG2P98160 Y_RNA.530-201ENST00000384587 101 ntBASIC-0.89□□□□□ -2.55
HSPG2P98160 RNU6-695P-201ENST00000391157 104 ntBASIC-0.89□□□□□ -2.55
HSPG2P98160 SNORD19-201ENST00000391191 68 ntBASIC-0.89□□□□□ -2.55
HSPG2P98160 RNA5SP147-201ENST00000516493 109 ntBASIC-0.89□□□□□ -2.55
HSPG2P98160 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.89□□□□□ -2.55
HSPG2P98160 MIR5701-3-201ENST00000578890 82 ntBASIC-0.89□□□□□ -2.55
HSPG2P98160 MIR548AB-201ENST00000584917 84 ntBASIC-0.89□□□□□ -2.55
HSPG2P98160 MIR5701-1-201ENST00000585138 82 ntBASIC-0.89□□□□□ -2.55
HSPG2P98160 MIR5701-2-201ENST00000615634 82 ntBASIC-0.89□□□□□ -2.55
HSPG2P98160 SNORA63.2-201ENST00000362603 126 ntBASIC-0.9□□□□□ -2.55
HSPG2P98160 SNORA69.1-201ENST00000390904 137 ntBASIC-0.9□□□□□ -2.55
HSPG2P98160 AC009779.6-201ENST00000603972 165 ntBASIC-0.9□□□□□ -2.55
HSPG2P98160 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.9□□□□□ -2.55
HSPG2P98160 RNU6-260P-201ENST00000384092 107 ntBASIC-0.9□□□□□ -2.55
HSPG2P98160 Y_RNA.526-201ENST00000384572 110 ntBASIC-0.9□□□□□ -2.55
HSPG2P98160 RNU2-38P-201ENST00000410856 79 ntBASIC-0.9□□□□□ -2.55
HSPG2P98160 RNA5SP401-201ENST00000515920 127 ntBASIC-0.9□□□□□ -2.55
HSPG2P98160 AC073114.1-201ENST00000612027 490 ntBASIC-0.9□□□□□ -2.55
HSPG2P98160 RNU6-79P-201ENST00000362511 107 ntBASIC-0.9□□□□□ -2.55
HSPG2P98160 RNU6-845P-201ENST00000362578 103 ntBASIC-0.9□□□□□ -2.55
HSPG2P98160 RNY4P9-201ENST00000363194 97 ntBASIC-0.9□□□□□ -2.55
HSPG2P98160 Y_RNA.424-201ENST00000384063 103 ntBASIC-0.9□□□□□ -2.55
HSPG2P98160 RNU6-332P-201ENST00000391193 108 ntBASIC-0.9□□□□□ -2.55
HSPG2P98160 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC-0.9□□□□□ -2.55
HSPG2P98160 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.9□□□□□ -2.55
HSPG2P98160 DEFB117-201ENST00000602356 141 ntBASIC-0.9□□□□□ -2.55
HSPG2P98160 AC021443.1-201ENST00000604478 211 ntBASIC-0.9□□□□□ -2.55
HSPG2P98160 RNU2-4P-201ENST00000606190 192 ntBASIC-0.9□□□□□ -2.55
HSPG2P98160 SNORD19B.1-201ENST00000630615 80 ntBASIC-0.9□□□□□ -2.55
HSPG2P98160 Y_RNA.380-201ENST00000365663 111 ntBASIC-0.91□□□□□ -2.55
HSPG2P98160 RNU7-4P-201ENST00000516961 62 ntBASIC-0.91□□□□□ -2.55
HSPG2P98160 Y_RNA.721-201ENST00000517207 102 ntBASIC-0.91□□□□□ -2.55
HSPG2P98160 AC005899.2-201ENST00000584353 90 ntBASIC-0.91□□□□□ -2.55
HSPG2P98160 AC018645.2-201ENST00000609151 472 ntBASIC-0.91□□□□□ -2.55
HSPG2P98160 AP000720.1-201ENST00000625091 483 ntBASIC-0.91□□□□□ -2.55
HSPG2P98160 RNU6-593P-201ENST00000364716 112 ntBASIC-0.91□□□□□ -2.55
HSPG2P98160 Y_RNA.584-201ENST00000391090 114 ntBASIC-0.91□□□□□ -2.55
HSPG2P98160 RNU6-630P-201ENST00000391258 106 ntBASIC-0.91□□□□□ -2.55
HSPG2P98160 Y_RNA.622-201ENST00000411091 108 ntBASIC-0.91□□□□□ -2.55
HSPG2P98160 RNU6-1299P-201ENST00000516316 100 ntBASIC-0.91□□□□□ -2.55
HSPG2P98160 MTND3P12-201ENST00000559068 328 ntBASIC-0.91□□□□□ -2.55
HSPG2P98160 SNORD113-5-201ENST00000607261 78 ntBASIC-0.91□□□□□ -2.55
HSPG2P98160 FTX_4.1-201ENST00000616291 147 ntBASIC-0.91□□□□□ -2.55
HSPG2P98160 U6.92-201ENST00000636464 89 ntBASIC-0.91□□□□□ -2.55
HSPG2P98160 Y_RNA.418-201ENST00000384029 102 ntBASIC-0.91□□□□□ -2.56
HSPG2P98160 RNU6-751P-201ENST00000516382 101 ntBASIC-0.91□□□□□ -2.56
HSPG2P98160 AC006254.2-201ENST00000603259 279 ntBASIC-0.91□□□□□ -2.56
HSPG2P98160 RNU6-89P-201ENST00000606519 100 ntBASIC-0.91□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms