Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 Y_RNA.567-201ENST00000384736 106 ntBASIC0.46□□□□□ -2.34
IRX4P78413 MIR644A-201ENST00000385262 94 ntBASIC0.46□□□□□ -2.34
IRX4P78413 MT-TI-201ENST00000387365 69 ntBASIC0.46□□□□□ -2.34
IRX4P78413 SNORA40-201ENST00000388090 126 ntBASIC0.46□□□□□ -2.34
IRX4P78413 SNORA31.14-201ENST00000516728 116 ntBASIC0.46□□□□□ -2.34
IRX4P78413 RNU7-6P-201ENST00000516845 62 ntBASIC0.46□□□□□ -2.34
IRX4P78413 RNA5SP94-201ENST00000516917 108 ntBASIC0.46□□□□□ -2.34
IRX4P78413 MIR4514-201ENST00000581410 57 ntBASIC0.46□□□□□ -2.34
IRX4P78413 MIR3163-201ENST00000581592 73 ntBASIC0.46□□□□□ -2.34
IRX4P78413 TUG1_4.1-201ENST00000619464 181 ntBASIC0.46□□□□□ -2.34
IRX4P78413 uc_338.16-201ENST00000621804 95 ntBASIC0.46□□□□□ -2.34
IRX4P78413 Y_RNA.119-201ENST00000363301 96 ntBASIC0.45□□□□□ -2.34
IRX4P78413 Y_RNA.174-201ENST00000363781 105 ntBASIC0.45□□□□□ -2.34
IRX4P78413 RNU6-1307P-201ENST00000391012 103 ntBASIC0.45□□□□□ -2.34
IRX4P78413 RNU7-48P-201ENST00000458875 63 ntBASIC0.45□□□□□ -2.34
IRX4P78413 RNU7-2P-201ENST00000516096 62 ntBASIC0.45□□□□□ -2.34
IRX4P78413 RNU6-1061P-201ENST00000516530 99 ntBASIC0.45□□□□□ -2.34
IRX4P78413 AC092634.7-201ENST00000621022 103 ntBASIC0.45□□□□□ -2.34
IRX4P78413 MIR101-2-201ENST00000362195 79 ntBASIC0.44□□□□□ -2.34
IRX4P78413 RNY1P2-201ENST00000364820 117 ntBASIC0.44□□□□□ -2.34
IRX4P78413 Y_RNA.528-201ENST00000384575 108 ntBASIC0.44□□□□□ -2.34
IRX4P78413 RNA5SP136-201ENST00000410906 107 ntBASIC0.44□□□□□ -2.34
IRX4P78413 SNORA62.5-201ENST00000516634 120 ntBASIC0.44□□□□□ -2.34
IRX4P78413 Y_RNA.198-201ENST00000364013 98 ntBASIC0.43□□□□□ -2.34
IRX4P78413 RNA5SP517-201ENST00000364724 117 ntBASIC0.43□□□□□ -2.34
IRX4P78413 RNU6-865P-201ENST00000364772 107 ntBASIC0.43□□□□□ -2.34
IRX4P78413 MIR759-201ENST00000390224 91 ntBASIC0.43□□□□□ -2.34
IRX4P78413 SNORA68.3-201ENST00000515906 83 ntBASIC0.43□□□□□ -2.34
IRX4P78413 AC087741.2-201ENST00000619415 172 ntBASIC0.43□□□□□ -2.34
IRX4P78413 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.43□□□□□ -2.34
IRX4P78413 RNU6-774P-201ENST00000363238 107 ntBASIC0.42□□□□□ -2.34
IRX4P78413 SNORA63.5-201ENST00000363548 123 ntBASIC0.42□□□□□ -2.34
IRX4P78413 SNORD58C-201ENST00000365223 64 ntBASIC0.42□□□□□ -2.34
IRX4P78413 MIRLET7F2-201ENST00000385277 83 ntBASIC0.42□□□□□ -2.34
IRX4P78413 RNU6-735P-201ENST00000410612 107 ntBASIC0.42□□□□□ -2.34
IRX4P78413 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.42□□□□□ -2.34
IRX4P78413 RNU6-1211P-201ENST00000459179 105 ntBASIC0.42□□□□□ -2.34
IRX4P78413 RN7SKP12-201ENST00000516275 143 ntBASIC0.42□□□□□ -2.34
IRX4P78413 Y_RNA.703-201ENST00000516846 111 ntBASIC0.42□□□□□ -2.34
IRX4P78413 SNORA25.18-201ENST00000607153 114 ntBASIC0.42□□□□□ -2.34
IRX4P78413 AP001362.1-201ENST00000625165 124 ntBASIC0.42□□□□□ -2.34
IRX4P78413 SNORD115-19-201ENST00000363098 82 ntBASIC0.41□□□□□ -2.34
IRX4P78413 SNORD115-18-201ENST00000363293 82 ntBASIC0.41□□□□□ -2.34
IRX4P78413 RNU6-1229P-201ENST00000364295 107 ntBASIC0.41□□□□□ -2.34
IRX4P78413 SNORD115-17-201ENST00000364612 82 ntBASIC0.41□□□□□ -2.34
IRX4P78413 SNORD71-201ENST00000411292 86 ntBASIC0.41□□□□□ -2.34
IRX4P78413 RNU6-772P-201ENST00000516042 105 ntBASIC0.41□□□□□ -2.34
IRX4P78413 RNA5SP476-201ENST00000516613 103 ntBASIC0.41□□□□□ -2.34
IRX4P78413 RNU6-971P-201ENST00000516920 106 ntBASIC0.41□□□□□ -2.34
IRX4P78413 MIR3133-201ENST00000583157 78 ntBASIC0.41□□□□□ -2.34
IRX4P78413 Y_RNA.773-201ENST00000607168 90 ntBASIC0.41□□□□□ -2.34
IRX4P78413 AC025166.1-201ENST00000612411 163 ntBASIC0.41□□□□□ -2.34
IRX4P78413 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
IRX4P78413 Y_RNA.98-201ENST00000363109 102 ntBASIC0.4□□□□□ -2.35
IRX4P78413 RNA5SP245-201ENST00000364239 121 ntBASIC0.4□□□□□ -2.35
IRX4P78413 SNORD115-35-201ENST00000365122 82 ntBASIC0.4□□□□□ -2.35
IRX4P78413 RNU6-1062P-201ENST00000383908 107 ntBASIC0.4□□□□□ -2.35
IRX4P78413 RNU6-429P-201ENST00000384582 108 ntBASIC0.4□□□□□ -2.35
IRX4P78413 Y_RNA.586-201ENST00000391146 98 ntBASIC0.4□□□□□ -2.35
IRX4P78413 RNA5SP63-201ENST00000391225 112 ntBASIC0.4□□□□□ -2.35
IRX4P78413 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.4□□□□□ -2.35
IRX4P78413 RNU6-135P-201ENST00000516769 101 ntBASIC0.4□□□□□ -2.35
IRX4P78413 RNU6-1234P-201ENST00000516877 103 ntBASIC0.4□□□□□ -2.35
IRX4P78413 MIR4500-201ENST00000579472 76 ntBASIC0.4□□□□□ -2.35
IRX4P78413 MIR376B-201ENST00000614515 100 ntBASIC0.4□□□□□ -2.35
IRX4P78413 MIR1255B1-201ENST00000636325 63 ntBASIC0.4□□□□□ -2.35
IRX4P78413 Y_RNA.328-201ENST00000365208 113 ntBASIC0.39□□□□□ -2.35
IRX4P78413 MIR539-201ENST00000365690 78 ntBASIC0.39□□□□□ -2.35
IRX4P78413 SNORA8.2-201ENST00000384372 139 ntBASIC0.39□□□□□ -2.35
IRX4P78413 RNU6-35P-201ENST00000384530 107 ntBASIC0.39□□□□□ -2.35
IRX4P78413 MIR548D2-201ENST00000384955 97 ntBASIC0.39□□□□□ -2.35
IRX4P78413 SNORA40.8-201ENST00000411034 126 ntBASIC0.39□□□□□ -2.35
IRX4P78413 Y_RNA.56-201ENST00000362798 112 ntBASIC0.38□□□□□ -2.35
IRX4P78413 Y_RNA.127-201ENST00000363386 109 ntBASIC0.38□□□□□ -2.35
IRX4P78413 SNORA36.1-201ENST00000363424 132 ntBASIC0.38□□□□□ -2.35
IRX4P78413 SNORA50A-201ENST00000384225 134 ntBASIC0.38□□□□□ -2.35
IRX4P78413 MIR518A1-201ENST00000385068 85 ntBASIC0.38□□□□□ -2.35
IRX4P78413 RNU7-107P-201ENST00000459121 61 ntBASIC0.38□□□□□ -2.35
IRX4P78413 AC023932.2-201ENST00000603176 175 ntBASIC0.38□□□□□ -2.35
IRX4P78413 MTND5P18-201ENST00000445624 1801 ntBASIC0.38□□□□□ -2.35
IRX4P78413 MIR34C-201ENST00000384831 77 ntBASIC0.37□□□□□ -2.35
IRX4P78413 BX276092.1-201ENST00000427368 251 ntBASIC0.37□□□□□ -2.35
IRX4P78413 SUMO1P3-201ENST00000439961 304 ntBASIC0.37□□□□□ -2.35
IRX4P78413 RNU6-521P-201ENST00000516663 105 ntBASIC0.37□□□□□ -2.35
IRX4P78413 MIR548H5-201ENST00000580314 60 ntBASIC0.37□□□□□ -2.35
IRX4P78413 MIR4639-201ENST00000584938 69 ntBASIC0.37□□□□□ -2.35
IRX4P78413 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.36□□□□□ -2.35
IRX4P78413 AL157777.2-201ENST00000258070 137 ntBASIC0.36□□□□□ -2.35
IRX4P78413 RNU6-187P-201ENST00000384139 106 ntBASIC0.36□□□□□ -2.35
IRX4P78413 Y_RNA.525-201ENST00000384570 113 ntBASIC0.36□□□□□ -2.35
IRX4P78413 SNORD28-201ENST00000384706 75 ntBASIC0.36□□□□□ -2.35
IRX4P78413 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.36□□□□□ -2.35
IRX4P78413 Y_RNA.630-201ENST00000411370 108 ntBASIC0.36□□□□□ -2.35
IRX4P78413 RNA5SP268-201ENST00000516828 124 ntBASIC0.36□□□□□ -2.35
IRX4P78413 SCARNA16.5-201ENST00000517114 183 ntBASIC0.36□□□□□ -2.35
IRX4P78413 RNA5SP47-201ENST00000517230 109 ntBASIC0.36□□□□□ -2.35
IRX4P78413 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.36□□□□□ -2.35
IRX4P78413 MIRLET7D-201ENST00000362263 87 ntBASIC0.35□□□□□ -2.35
IRX4P78413 SNORD118-201ENST00000363593 134 ntBASIC0.35□□□□□ -2.35
IRX4P78413 Y_RNA.346-201ENST00000365385 112 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 168.4 ms