Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 AP000720.1-201ENST00000625091 483 ntBASIC-2.19□□□□□ -2.76
RPS28P62857 RNA5SP405-201ENST00000363059 114 ntBASIC-2.2□□□□□ -2.76
RPS28P62857 Y_RNA.157-201ENST00000363638 102 ntBASIC-2.2□□□□□ -2.76
RPS28P62857 Y_RNA.301-201ENST00000364990 103 ntBASIC-2.2□□□□□ -2.76
RPS28P62857 RNU6-102P-201ENST00000384485 104 ntBASIC-2.2□□□□□ -2.76
RPS28P62857 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.2□□□□□ -2.76
RPS28P62857 MIR216B-201ENST00000390186 82 ntBASIC-2.2□□□□□ -2.76
RPS28P62857 RNU6-1307P-201ENST00000391012 103 ntBASIC-2.2□□□□□ -2.76
RPS28P62857 RNU6-780P-201ENST00000391030 104 ntBASIC-2.2□□□□□ -2.76
RPS28P62857 AC107399.1-201ENST00000451226 265 ntBASIC-2.2□□□□□ -2.76
RPS28P62857 RNU6-570P-201ENST00000517051 105 ntBASIC-2.2□□□□□ -2.76
RPS28P62857 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-2.2□□□□□ -2.76
RPS28P62857 MIR5692C2-201ENST00000577959 77 ntBASIC-2.2□□□□□ -2.76
RPS28P62857 MIR548AE2-201ENST00000583456 67 ntBASIC-2.2□□□□□ -2.76
RPS28P62857 AC097639.2-201ENST00000603159 172 ntBASIC-2.2□□□□□ -2.76
RPS28P62857 RNU6-850P-201ENST00000516934 103 ntBASIC-2.21□□□□□ -2.76
RPS28P62857 MIR3139-201ENST00000579145 76 ntBASIC-2.21□□□□□ -2.76
RPS28P62857 MIR4490-201ENST00000582647 84 ntBASIC-2.21□□□□□ -2.76
RPS28P62857 AP001362.1-201ENST00000625165 124 ntBASIC-2.21□□□□□ -2.76
RPS28P62857 MIR5683-201ENST00000636514 76 ntBASIC-2.21□□□□□ -2.76
RPS28P62857 Y_RNA.23-201ENST00000362496 106 ntBASIC-2.22□□□□□ -2.76
RPS28P62857 Y_RNA.127-201ENST00000363386 109 ntBASIC-2.22□□□□□ -2.76
RPS28P62857 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.22□□□□□ -2.76
RPS28P62857 Y_RNA.448-201ENST00000384185 108 ntBASIC-2.22□□□□□ -2.76
RPS28P62857 MIR526A2-201ENST00000390198 65 ntBASIC-2.22□□□□□ -2.76
RPS28P62857 SNORD19-201ENST00000391191 68 ntBASIC-2.22□□□□□ -2.76
RPS28P62857 MIR548F5-201ENST00000408421 86 ntBASIC-2.22□□□□□ -2.76
RPS28P62857 RNU6-1064P-201ENST00000410626 104 ntBASIC-2.22□□□□□ -2.76
RPS28P62857 Y_RNA.613-201ENST00000410726 97 ntBASIC-2.22□□□□□ -2.76
RPS28P62857 AC019235.1-201ENST00000503847 207 ntBASIC-2.22□□□□□ -2.76
RPS28P62857 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-2.22□□□□□ -2.76
RPS28P62857 RNU6-911P-201ENST00000516523 104 ntBASIC-2.22□□□□□ -2.76
RPS28P62857 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-2.22□□□□□ -2.76
RPS28P62857 AC006006.1-201ENST00000603082 144 ntBASIC-2.22□□□□□ -2.76
RPS28P62857 FAS-AS1.1-201ENST00000615327 126 ntBASIC-2.22□□□□□ -2.76
RPS28P62857 AC124864.2-201ENST00000624736 186 ntBASIC-2.22□□□□□ -2.76
RPS28P62857 Y_RNA.98-201ENST00000363109 102 ntBASIC-2.23□□□□□ -2.77
RPS28P62857 RNU5E-4P-201ENST00000364931 120 ntBASIC-2.23□□□□□ -2.77
RPS28P62857 Y_RNA.346-201ENST00000365385 112 ntBASIC-2.23□□□□□ -2.77
RPS28P62857 Y_RNA.521-201ENST00000384560 114 ntBASIC-2.23□□□□□ -2.77
RPS28P62857 MIR496-201ENST00000385226 102 ntBASIC-2.23□□□□□ -2.77
RPS28P62857 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-2.23□□□□□ -2.77
RPS28P62857 RNU6-695P-201ENST00000391157 104 ntBASIC-2.23□□□□□ -2.77
RPS28P62857 U6.96-201ENST00000636425 70 ntBASIC-2.23□□□□□ -2.77
RPS28P62857 RNU6-774P-201ENST00000363238 107 ntBASIC-2.24□□□□□ -2.77
RPS28P62857 Y_RNA.120-201ENST00000363304 110 ntBASIC-2.24□□□□□ -2.77
RPS28P62857 Y_RNA.190-201ENST00000363964 101 ntBASIC-2.24□□□□□ -2.77
RPS28P62857 RNU6-119P-201ENST00000364882 107 ntBASIC-2.24□□□□□ -2.77
RPS28P62857 Y_RNA.340-201ENST00000365330 92 ntBASIC-2.24□□□□□ -2.77
RPS28P62857 Y_RNA.380-201ENST00000365663 111 ntBASIC-2.24□□□□□ -2.77
RPS28P62857 MIR206-201ENST00000384872 86 ntBASIC-2.24□□□□□ -2.77
RPS28P62857 FGF7P4-201ENST00000509595 295 ntBASIC-2.24□□□□□ -2.77
RPS28P62857 RNU6-1238P-201ENST00000517215 102 ntBASIC-2.24□□□□□ -2.77
RPS28P62857 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-2.24□□□□□ -2.77
RPS28P62857 AC087741.2-201ENST00000619415 172 ntBASIC-2.24□□□□□ -2.77
RPS28P62857 AC024614.3-201ENST00000637860 256 ntBASIC-2.24□□□□□ -2.77
RPS28P62857 RNU6-120P-201ENST00000516077 103 ntBASIC-2.25□□□□□ -2.77
RPS28P62857 RNU6-764P-201ENST00000516396 105 ntBASIC-2.25□□□□□ -2.77
RPS28P62857 AC007485.1-201ENST00000616755 206 ntBASIC-2.25□□□□□ -2.77
RPS28P62857 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-2.25□□□□□ -2.77
RPS28P62857 MTND5P26-201ENST00000426018 1752 ntBASIC-2.26□□□□□ -2.77
RPS28P62857 RNU6-194P-201ENST00000363862 105 ntBASIC-2.26□□□□□ -2.77
RPS28P62857 RNU6-841P-201ENST00000383872 107 ntBASIC-2.26□□□□□ -2.77
RPS28P62857 RNY1P6-201ENST00000384193 109 ntBASIC-2.26□□□□□ -2.77
RPS28P62857 Y_RNA.475-201ENST00000384345 101 ntBASIC-2.26□□□□□ -2.77
RPS28P62857 Y_RNA.482-201ENST00000384377 111 ntBASIC-2.26□□□□□ -2.77
RPS28P62857 RNU6-1148P-201ENST00000410992 104 ntBASIC-2.26□□□□□ -2.77
RPS28P62857 Y_RNA.622-201ENST00000411091 108 ntBASIC-2.26□□□□□ -2.77
RPS28P62857 MIR548AM-201ENST00000584298 74 ntBASIC-2.26□□□□□ -2.77
RPS28P62857 DLEU2_1.1-201ENST00000612089 120 ntBASIC-2.26□□□□□ -2.77
RPS28P62857 DLEU2_1.2-201ENST00000614667 120 ntBASIC-2.26□□□□□ -2.77
RPS28P62857 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-2.26□□□□□ -2.77
RPS28P62857 RNU6-957P-201ENST00000363652 99 ntBASIC-2.27□□□□□ -2.77
RPS28P62857 RNU6-990P-201ENST00000364385 104 ntBASIC-2.27□□□□□ -2.77
RPS28P62857 RNU6-937P-201ENST00000384325 106 ntBASIC-2.27□□□□□ -2.77
RPS28P62857 RNU6-1228P-201ENST00000391014 107 ntBASIC-2.27□□□□□ -2.77
RPS28P62857 Y_RNA.599-201ENST00000410489 109 ntBASIC-2.27□□□□□ -2.77
RPS28P62857 RNU6-507P-201ENST00000516045 100 ntBASIC-2.27□□□□□ -2.77
RPS28P62857 MIR4696-201ENST00000581431 70 ntBASIC-2.27□□□□□ -2.77
RPS28P62857 Y_RNA.71-201ENST00000362892 104 ntBASIC-2.28□□□□□ -2.77
RPS28P62857 Y_RNA.314-201ENST00000365114 102 ntBASIC-2.28□□□□□ -2.77
RPS28P62857 SNORD101-201ENST00000384027 73 ntBASIC-2.28□□□□□ -2.77
RPS28P62857 RNU6-1042P-201ENST00000384204 107 ntBASIC-2.28□□□□□ -2.77
RPS28P62857 SNORD63-201ENST00000384262 68 ntBASIC-2.28□□□□□ -2.77
RPS28P62857 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-2.28□□□□□ -2.77
RPS28P62857 Y_RNA.633-201ENST00000459107 95 ntBASIC-2.28□□□□□ -2.77
RPS28P62857 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-2.28□□□□□ -2.77
RPS28P62857 MRPS35P2-201ENST00000508242 191 ntBASIC-2.28□□□□□ -2.77
RPS28P62857 RNU6-1057P-201ENST00000517162 102 ntBASIC-2.28□□□□□ -2.77
RPS28P62857 MIR5688-201ENST00000580619 83 ntBASIC-2.28□□□□□ -2.77
RPS28P62857 MIR3123-201ENST00000583417 75 ntBASIC-2.28□□□□□ -2.77
RPS28P62857 C8orf59P2-201ENST00000603441 271 ntBASIC-2.28□□□□□ -2.77
RPS28P62857 SNORD36A-201ENST00000362874 73 ntBASIC-2.29□□□□□ -2.78
RPS28P62857 Y_RNA.359-201ENST00000365498 102 ntBASIC-2.29□□□□□ -2.78
RPS28P62857 Y_RNA.418-201ENST00000384029 102 ntBASIC-2.29□□□□□ -2.78
RPS28P62857 Y_RNA.558-201ENST00000384685 113 ntBASIC-2.29□□□□□ -2.78
RPS28P62857 MT-TM-201ENST00000387377 68 ntBASIC-2.29□□□□□ -2.78
RPS28P62857 RNU4-88P-201ENST00000411220 86 ntBASIC-2.29□□□□□ -2.78
RPS28P62857 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-2.29□□□□□ -2.78
RPS28P62857 RNU6-1272P-201ENST00000362776 107 ntBASIC-2.3□□□□□ -2.78
Retrieved 100 of 98,524 protein–RNA pairs in 174.9 ms