Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 BX276092.1-201ENST00000427368 251 ntBASIC1.83□□□□□ -2.12
ERVFC1P60507 MIR8074-201ENST00000615081 81 ntBASIC1.83□□□□□ -2.12
ERVFC1P60507 MIR6516-201ENST00000630554 81 ntBASIC1.83□□□□□ -2.12
ERVFC1P60507 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.82□□□□□ -2.12
ERVFC1P60507 Y_RNA.508-201ENST00000384502 114 ntBASIC1.82□□□□□ -2.12
ERVFC1P60507 SNORA72.6-201ENST00000384520 129 ntBASIC1.82□□□□□ -2.12
ERVFC1P60507 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
ERVFC1P60507 MIR1185-1-201ENST00000408598 86 ntBASIC1.82□□□□□ -2.12
ERVFC1P60507 AC005908.1-201ENST00000468701 347 ntBASIC1.82□□□□□ -2.12
ERVFC1P60507 U7.4-201ENST00000614961 63 ntBASIC1.82□□□□□ -2.12
ERVFC1P60507 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.81□□□□□ -2.12
ERVFC1P60507 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.81□□□□□ -2.12
ERVFC1P60507 RNU6-1094P-201ENST00000362416 104 ntBASIC1.81□□□□□ -2.12
ERVFC1P60507 MIR499A-201ENST00000384903 122 ntBASIC1.81□□□□□ -2.12
ERVFC1P60507 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
ERVFC1P60507 AC245517.4-201ENST00000448601 281 ntBASIC1.81□□□□□ -2.12
ERVFC1P60507 MIR18B-201ENST00000454574 71 ntBASIC1.81□□□□□ -2.12
ERVFC1P60507 snoU13.11-201ENST00000459219 104 ntBASIC1.81□□□□□ -2.12
ERVFC1P60507 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
ERVFC1P60507 RNA5SP264-201ENST00000363115 107 ntBASIC1.8□□□□□ -2.12
ERVFC1P60507 RNU6-205P-201ENST00000390858 107 ntBASIC1.8□□□□□ -2.12
ERVFC1P60507 SUMO2P12-201ENST00000405924 140 ntBASIC1.8□□□□□ -2.12
ERVFC1P60507 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.8□□□□□ -2.12
ERVFC1P60507 RNU6-1194P-201ENST00000516208 104 ntBASIC1.8□□□□□ -2.12
ERVFC1P60507 MIR4419B-201ENST00000577260 68 ntBASIC1.8□□□□□ -2.12
ERVFC1P60507 MIR4796-201ENST00000580742 81 ntBASIC1.8□□□□□ -2.12
ERVFC1P60507 MIR4491-201ENST00000581087 68 ntBASIC1.8□□□□□ -2.12
ERVFC1P60507 AL645939.4-201ENST00000604495 135 ntBASIC1.8□□□□□ -2.12
ERVFC1P60507 uc_338.6-201ENST00000613544 171 ntBASIC1.8□□□□□ -2.12
ERVFC1P60507 MIR302D-201ENST00000362275 68 ntBASIC1.79□□□□□ -2.12
ERVFC1P60507 SNORA63.2-201ENST00000362603 126 ntBASIC1.79□□□□□ -2.12
ERVFC1P60507 Y_RNA.355-201ENST00000365462 98 ntBASIC1.79□□□□□ -2.12
ERVFC1P60507 MIR516A2-201ENST00000384888 90 ntBASIC1.79□□□□□ -2.12
ERVFC1P60507 MIR516A1-201ENST00000385033 90 ntBASIC1.79□□□□□ -2.12
ERVFC1P60507 RNU6-243P-201ENST00000391140 107 ntBASIC1.79□□□□□ -2.12
ERVFC1P60507 Y_RNA.588-201ENST00000391254 102 ntBASIC1.79□□□□□ -2.12
ERVFC1P60507 AL450471.1-201ENST00000447509 127 ntBASIC1.79□□□□□ -2.12
ERVFC1P60507 Y_RNA.660-201ENST00000516002 120 ntBASIC1.79□□□□□ -2.12
ERVFC1P60507 SNORA44.1-201ENST00000517031 108 ntBASIC1.79□□□□□ -2.12
ERVFC1P60507 MIR4536-1-201ENST00000583537 88 ntBASIC1.79□□□□□ -2.12
ERVFC1P60507 BX248123.2-201ENST00000606318 124 ntBASIC1.79□□□□□ -2.12
ERVFC1P60507 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.79□□□□□ -2.12
ERVFC1P60507 MIRLET7A1-201ENST00000362295 80 ntBASIC1.78□□□□□ -2.12
ERVFC1P60507 RNU4-58P-201ENST00000363192 141 ntBASIC1.78□□□□□ -2.12
ERVFC1P60507 RNU6-811P-201ENST00000384069 107 ntBASIC1.78□□□□□ -2.12
ERVFC1P60507 MIR889-201ENST00000401280 79 ntBASIC1.78□□□□□ -2.12
ERVFC1P60507 AC008834.1-201ENST00000511612 175 ntBASIC1.78□□□□□ -2.12
ERVFC1P60507 RNU6-75P-201ENST00000515944 104 ntBASIC1.78□□□□□ -2.12
ERVFC1P60507 AC103810.8-201ENST00000607347 118 ntBASIC1.78□□□□□ -2.12
ERVFC1P60507 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
ERVFC1P60507 MIR103A2-201ENST00000362154 78 ntBASIC1.77□□□□□ -2.13
ERVFC1P60507 Y_RNA.118-201ENST00000363300 101 ntBASIC1.77□□□□□ -2.13
ERVFC1P60507 RNU1-42P-201ENST00000364033 160 ntBASIC1.77□□□□□ -2.13
ERVFC1P60507 Y_RNA.283-201ENST00000364798 112 ntBASIC1.77□□□□□ -2.13
ERVFC1P60507 RNU6-686P-201ENST00000364839 107 ntBASIC1.77□□□□□ -2.13
ERVFC1P60507 SNORA25.9-201ENST00000365087 128 ntBASIC1.77□□□□□ -2.13
ERVFC1P60507 RNU6-53P-201ENST00000365367 106 ntBASIC1.77□□□□□ -2.13
ERVFC1P60507 Y_RNA.545-201ENST00000384652 105 ntBASIC1.77□□□□□ -2.13
ERVFC1P60507 RNU6-788P-201ENST00000390967 104 ntBASIC1.77□□□□□ -2.13
ERVFC1P60507 AC023790.1-201ENST00000482174 347 ntBASIC1.77□□□□□ -2.13
ERVFC1P60507 FGF7P7-201ENST00000514120 227 ntBASIC1.77□□□□□ -2.13
ERVFC1P60507 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.77□□□□□ -2.13
ERVFC1P60507 MIR3122-201ENST00000577243 73 ntBASIC1.77□□□□□ -2.13
ERVFC1P60507 Y_RNA.565-201ENST00000384719 101 ntBASIC1.76□□□□□ -2.13
ERVFC1P60507 MIR519A1-201ENST00000385257 85 ntBASIC1.76□□□□□ -2.13
ERVFC1P60507 RNU6-947P-201ENST00000516264 106 ntBASIC1.76□□□□□ -2.13
ERVFC1P60507 RNU6-531P-201ENST00000516694 104 ntBASIC1.76□□□□□ -2.13
ERVFC1P60507 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.76□□□□□ -2.13
ERVFC1P60507 MIR3198-2-201ENST00000577868 80 ntBASIC1.76□□□□□ -2.13
ERVFC1P60507 SNORD92-201ENST00000585078 85 ntBASIC1.76□□□□□ -2.13
ERVFC1P60507 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
ERVFC1P60507 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
ERVFC1P60507 RNU6-654P-201ENST00000364373 107 ntBASIC1.75□□□□□ -2.13
ERVFC1P60507 RNU1-36P-201ENST00000365130 165 ntBASIC1.75□□□□□ -2.13
ERVFC1P60507 RNA5SP292-201ENST00000390974 118 ntBASIC1.75□□□□□ -2.13
ERVFC1P60507 RNU6-380P-201ENST00000410207 107 ntBASIC1.75□□□□□ -2.13
ERVFC1P60507 RNU7-106P-201ENST00000459514 67 ntBASIC1.75□□□□□ -2.13
ERVFC1P60507 MIR3064-201ENST00000581130 66 ntBASIC1.75□□□□□ -2.13
ERVFC1P60507 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.75□□□□□ -2.13
ERVFC1P60507 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
ERVFC1P60507 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
ERVFC1P60507 SNORD33-201ENST00000362761 85 ntBASIC1.74□□□□□ -2.13
ERVFC1P60507 SNORD93-201ENST00000408813 74 ntBASIC1.74□□□□□ -2.13
ERVFC1P60507 SNORD63B-201ENST00000411005 70 ntBASIC1.74□□□□□ -2.13
ERVFC1P60507 RNU6-523P-201ENST00000516304 54 ntBASIC1.74□□□□□ -2.13
ERVFC1P60507 SNORA18.5-201ENST00000516616 101 ntBASIC1.74□□□□□ -2.13
ERVFC1P60507 SNORA25.16-201ENST00000516741 121 ntBASIC1.74□□□□□ -2.13
ERVFC1P60507 AC104996.3-201ENST00000590718 94 ntBASIC1.74□□□□□ -2.13
ERVFC1P60507 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.74□□□□□ -2.13
ERVFC1P60507 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.73□□□□□ -2.13
ERVFC1P60507 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
ERVFC1P60507 SNORD1A-201ENST00000364968 72 ntBASIC1.73□□□□□ -2.13
ERVFC1P60507 Y_RNA.327-201ENST00000365201 102 ntBASIC1.73□□□□□ -2.13
ERVFC1P60507 RNU6-132P-201ENST00000383863 107 ntBASIC1.73□□□□□ -2.13
ERVFC1P60507 MIR30A-201ENST00000385092 71 ntBASIC1.73□□□□□ -2.13
ERVFC1P60507 MIR520H-201ENST00000385126 88 ntBASIC1.73□□□□□ -2.13
ERVFC1P60507 MIR548U-201ENST00000390728 81 ntBASIC1.73□□□□□ -2.13
ERVFC1P60507 RNU6-466P-201ENST00000391224 103 ntBASIC1.73□□□□□ -2.13
ERVFC1P60507 MIR934-201ENST00000401241 83 ntBASIC1.73□□□□□ -2.13
ERVFC1P60507 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 391.9 ms