Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 MIR548L-201ENST00000408303 86 ntBASIC0.16□□□□□ -2.38
RHBDL3P58872 AC069271.1-201ENST00000445577 156 ntBASIC0.16□□□□□ -2.38
RHBDL3P58872 Y_RNA.686-201ENST00000516548 134 ntBASIC0.16□□□□□ -2.38
RHBDL3P58872 Y_RNA.692-201ENST00000516627 105 ntBASIC0.16□□□□□ -2.38
RHBDL3P58872 RNY4P20-201ENST00000516678 93 ntBASIC0.16□□□□□ -2.38
RHBDL3P58872 AC004792.1-201ENST00000614523 137 ntBASIC0.16□□□□□ -2.38
RHBDL3P58872 AC067863.3-201ENST00000624172 122 ntBASIC0.16□□□□□ -2.38
RHBDL3P58872 AP001362.1-201ENST00000625165 124 ntBASIC0.16□□□□□ -2.38
RHBDL3P58872 RNA5SP245-201ENST00000364239 121 ntBASIC0.15□□□□□ -2.39
RHBDL3P58872 MIR635-201ENST00000384830 98 ntBASIC0.15□□□□□ -2.39
RHBDL3P58872 MIR206-201ENST00000384872 86 ntBASIC0.15□□□□□ -2.39
RHBDL3P58872 PCNPP3-201ENST00000393579 471 ntBASIC0.15□□□□□ -2.39
RHBDL3P58872 Y_RNA.778-201ENST00000620203 90 ntBASIC0.15□□□□□ -2.39
RHBDL3P58872 Y_RNA.49-201ENST00000362714 112 ntBASIC0.14□□□□□ -2.39
RHBDL3P58872 Y_RNA.433-201ENST00000384089 102 ntBASIC0.14□□□□□ -2.39
RHBDL3P58872 Y_RNA.448-201ENST00000384185 108 ntBASIC0.14□□□□□ -2.39
RHBDL3P58872 RNU6-1321P-201ENST00000390905 107 ntBASIC0.14□□□□□ -2.39
RHBDL3P58872 RNU7-2P-201ENST00000516096 62 ntBASIC0.14□□□□□ -2.39
RHBDL3P58872 RNU6-182P-201ENST00000516970 105 ntBASIC0.14□□□□□ -2.39
RHBDL3P58872 SNORA42.1-201ENST00000363515 137 ntBASIC0.13□□□□□ -2.39
RHBDL3P58872 RNU6-151P-201ENST00000364158 107 ntBASIC0.13□□□□□ -2.39
RHBDL3P58872 RNU6-865P-201ENST00000364772 107 ntBASIC0.13□□□□□ -2.39
RHBDL3P58872 Y_RNA.580-201ENST00000391004 95 ntBASIC0.13□□□□□ -2.39
RHBDL3P58872 RNA5SP299-201ENST00000391203 116 ntBASIC0.13□□□□□ -2.39
RHBDL3P58872 MIR5190-201ENST00000581537 80 ntBASIC0.13□□□□□ -2.39
RHBDL3P58872 Y_RNA.423-201ENST00000384057 113 ntBASIC0.12□□□□□ -2.39
RHBDL3P58872 MIR759-201ENST00000390224 91 ntBASIC0.12□□□□□ -2.39
RHBDL3P58872 snosnR66.1-201ENST00000391095 99 ntBASIC0.12□□□□□ -2.39
RHBDL3P58872 MIR548I2-201ENST00000408348 149 ntBASIC0.12□□□□□ -2.39
RHBDL3P58872 SNORA2A-201ENST00000383885 135 ntBASIC0.11□□□□□ -2.39
RHBDL3P58872 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.11□□□□□ -2.39
RHBDL3P58872 MIR1270-201ENST00000459320 83 ntBASIC0.11□□□□□ -2.39
RHBDL3P58872 RNA5SP285-201ENST00000516619 119 ntBASIC0.11□□□□□ -2.39
RHBDL3P58872 MIR4500-201ENST00000579472 76 ntBASIC0.11□□□□□ -2.39
RHBDL3P58872 Y_RNA.362-201ENST00000365518 110 ntBASIC0.1□□□□□ -2.39
RHBDL3P58872 Y_RNA.660-201ENST00000516002 120 ntBASIC0.1□□□□□ -2.39
RHBDL3P58872 MIR6755-201ENST00000619993 66 ntBASIC0.1□□□□□ -2.39
RHBDL3P58872 Y_RNA.328-201ENST00000365208 113 ntBASIC0.09□□□□□ -2.4
RHBDL3P58872 MIR760-201ENST00000390220 80 ntBASIC0.09□□□□□ -2.4
RHBDL3P58872 MIR3121-201ENST00000579680 77 ntBASIC0.09□□□□□ -2.4
RHBDL3P58872 U7.6-201ENST00000610841 64 ntBASIC0.09□□□□□ -2.4
RHBDL3P58872 RNY1P11-201ENST00000363759 113 ntBASIC0.08□□□□□ -2.4
RHBDL3P58872 RNU6-915P-201ENST00000364943 103 ntBASIC0.08□□□□□ -2.4
RHBDL3P58872 MIR1295A-201ENST00000408463 79 ntBASIC0.08□□□□□ -2.4
RHBDL3P58872 AC097635.1-201ENST00000450678 155 ntBASIC0.08□□□□□ -2.4
RHBDL3P58872 RNU7-197P-201ENST00000458836 62 ntBASIC0.08□□□□□ -2.4
RHBDL3P58872 MIR3163-201ENST00000581592 73 ntBASIC0.08□□□□□ -2.4
RHBDL3P58872 RNU6-508P-201ENST00000363231 103 ntBASIC0.07□□□□□ -2.4
RHBDL3P58872 Y_RNA.127-201ENST00000363386 109 ntBASIC0.07□□□□□ -2.4
RHBDL3P58872 RNU6-647P-201ENST00000364243 107 ntBASIC0.07□□□□□ -2.4
RHBDL3P58872 RNU6-726P-201ENST00000364680 107 ntBASIC0.07□□□□□ -2.4
RHBDL3P58872 SNORD115-35-201ENST00000365122 82 ntBASIC0.07□□□□□ -2.4
RHBDL3P58872 RNA5SP128-201ENST00000365305 116 ntBASIC0.07□□□□□ -2.4
RHBDL3P58872 MIR610-201ENST00000385139 96 ntBASIC0.07□□□□□ -2.4
RHBDL3P58872 RNU7-129P-201ENST00000516128 62 ntBASIC0.07□□□□□ -2.4
RHBDL3P58872 AC108081.1-201ENST00000604358 221 ntBASIC0.07□□□□□ -2.4
RHBDL3P58872 SNORD116-18-201ENST00000383961 92 ntBASIC0.06□□□□□ -2.4
RHBDL3P58872 RNU7-104P-201ENST00000459398 79 ntBASIC0.06□□□□□ -2.4
RHBDL3P58872 AP001328.1-201ENST00000528550 176 ntBASIC0.06□□□□□ -2.4
RHBDL3P58872 RNA5SP214-201ENST00000363378 118 ntBASIC0.05□□□□□ -2.4
RHBDL3P58872 Y_RNA.213-201ENST00000364178 111 ntBASIC0.05□□□□□ -2.4
RHBDL3P58872 RNU6-187P-201ENST00000384139 106 ntBASIC0.05□□□□□ -2.4
RHBDL3P58872 SNORD38.2-201ENST00000384470 69 ntBASIC0.05□□□□□ -2.4
RHBDL3P58872 RNU6-35P-201ENST00000384530 107 ntBASIC0.05□□□□□ -2.4
RHBDL3P58872 RNA5SP395-201ENST00000516567 118 ntBASIC0.05□□□□□ -2.4
RHBDL3P58872 MIR4667-201ENST00000578933 66 ntBASIC0.05□□□□□ -2.4
RHBDL3P58872 MIR5706-201ENST00000579841 80 ntBASIC0.05□□□□□ -2.4
RHBDL3P58872 MIR4768-201ENST00000585270 74 ntBASIC0.05□□□□□ -2.4
RHBDL3P58872 AP001340.1-201ENST00000624405 217 ntBASIC0.05□□□□□ -2.4
RHBDL3P58872 AC073869.9-201ENST00000641610 120 ntBASIC0.05□□□□□ -2.4
RHBDL3P58872 RNA5SP403-201ENST00000363598 108 ntBASIC0.04□□□□□ -2.4
RHBDL3P58872 RNU6-616P-201ENST00000384353 107 ntBASIC0.04□□□□□ -2.4
RHBDL3P58872 MIR599-201ENST00000385069 95 ntBASIC0.04□□□□□ -2.4
RHBDL3P58872 MIR519A1-201ENST00000385257 85 ntBASIC0.04□□□□□ -2.4
RHBDL3P58872 MIR892B-201ENST00000401279 77 ntBASIC0.04□□□□□ -2.4
RHBDL3P58872 RNA5SP136-201ENST00000410906 107 ntBASIC0.04□□□□□ -2.4
RHBDL3P58872 RNU7-161P-201ENST00000517289 62 ntBASIC0.04□□□□□ -2.4
RHBDL3P58872 MIR548X2-201ENST00000579776 100 ntBASIC0.04□□□□□ -2.4
RHBDL3P58872 RNU6-571P-201ENST00000384128 107 ntBASIC0.03□□□□□ -2.4
RHBDL3P58872 RNU6-1104P-201ENST00000384723 104 ntBASIC0.03□□□□□ -2.4
RHBDL3P58872 MIR329-2-201ENST00000385029 84 ntBASIC0.03□□□□□ -2.4
RHBDL3P58872 RNU6-460P-201ENST00000391158 108 ntBASIC0.03□□□□□ -2.4
RHBDL3P58872 RNU6-394P-201ENST00000410735 107 ntBASIC0.03□□□□□ -2.4
RHBDL3P58872 RNU7-6P-201ENST00000516845 62 ntBASIC0.03□□□□□ -2.4
RHBDL3P58872 MIR6759-201ENST00000638110 65 ntBASIC0.03□□□□□ -2.4
RHBDL3P58872 AC074198.2-201ENST00000508153 258 ntBASIC0.02□□□□□ -2.41
RHBDL3P58872 MIR4743-201ENST00000584576 69 ntBASIC0.02□□□□□ -2.41
RHBDL3P58872 AL162376.1-201ENST00000624117 175 ntBASIC0.02□□□□□ -2.41
RHBDL3P58872 RNU6-170P-201ENST00000362832 104 ntBASIC0.01□□□□□ -2.41
RHBDL3P58872 SNORD114-9-201ENST00000364370 72 ntBASIC0.01□□□□□ -2.41
RHBDL3P58872 Y_RNA.270-201ENST00000364693 104 ntBASIC0.01□□□□□ -2.41
RHBDL3P58872 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.01□□□□□ -2.41
RHBDL3P58872 RPL39P34-201ENST00000477141 156 ntBASIC0.01□□□□□ -2.41
RHBDL3P58872 TRAJ51-201ENST00000504127 63 ntBASIC0.01□□□□□ -2.41
RHBDL3P58872 AC104408.1-201ENST00000605241 170 ntBASIC0.01□□□□□ -2.41
RHBDL3P58872 SNORD115-19-201ENST00000363098 82 ntBASIC0□□□□□ -2.41
RHBDL3P58872 SNORD115-18-201ENST00000363293 82 ntBASIC0□□□□□ -2.41
RHBDL3P58872 SNORD115-17-201ENST00000364612 82 ntBASIC0□□□□□ -2.41
RHBDL3P58872 SNORD41.1-201ENST00000391000 69 ntBASIC0□□□□□ -2.41
RHBDL3P58872 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 239.7 ms