Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 MIR4804-201ENST00000581683 73 ntBASIC1.19□□□□□ -2.22
CLRN1P58418 AC013244.2-201ENST00000603396 103 ntBASIC1.19□□□□□ -2.22
CLRN1P58418 snoU13.31-201ENST00000607291 104 ntBASIC1.19□□□□□ -2.22
CLRN1P58418 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.19□□□□□ -2.22
CLRN1P58418 RNU6-364P-201ENST00000384387 107 ntBASIC1.18□□□□□ -2.22
CLRN1P58418 RNU6-813P-201ENST00000384691 107 ntBASIC1.18□□□□□ -2.22
CLRN1P58418 MIR758-201ENST00000390227 88 ntBASIC1.18□□□□□ -2.22
CLRN1P58418 MIR1827-201ENST00000408549 66 ntBASIC1.18□□□□□ -2.22
CLRN1P58418 SNRPGP12-201ENST00000449481 213 ntBASIC1.18□□□□□ -2.22
CLRN1P58418 Y_RNA.676-201ENST00000516393 96 ntBASIC1.18□□□□□ -2.22
CLRN1P58418 Y_RNA.42-201ENST00000362660 108 ntBASIC1.17□□□□□ -2.22
CLRN1P58418 SNORA25.8-201ENST00000364831 128 ntBASIC1.17□□□□□ -2.22
CLRN1P58418 MIR488-201ENST00000365739 83 ntBASIC1.17□□□□□ -2.22
CLRN1P58418 RNU1-123P-201ENST00000458950 160 ntBASIC1.17□□□□□ -2.22
CLRN1P58418 SNORD124-201ENST00000459577 104 ntBASIC1.17□□□□□ -2.22
CLRN1P58418 Y_RNA.705-201ENST00000516862 110 ntBASIC1.17□□□□□ -2.22
CLRN1P58418 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.17□□□□□ -2.22
CLRN1P58418 SNORD92-201ENST00000585078 85 ntBASIC1.17□□□□□ -2.22
CLRN1P58418 MIR7974-201ENST00000615835 79 ntBASIC1.17□□□□□ -2.22
CLRN1P58418 RNU6-1244P-201ENST00000363614 108 ntBASIC1.16□□□□□ -2.22
CLRN1P58418 Y_RNA.342-201ENST00000365352 113 ntBASIC1.16□□□□□ -2.22
CLRN1P58418 RNU6-571P-201ENST00000384128 107 ntBASIC1.16□□□□□ -2.22
CLRN1P58418 SNORA17.3-201ENST00000391159 129 ntBASIC1.16□□□□□ -2.22
CLRN1P58418 RNU7-56P-201ENST00000458744 62 ntBASIC1.16□□□□□ -2.22
CLRN1P58418 RNU7-102P-201ENST00000458948 62 ntBASIC1.16□□□□□ -2.22
CLRN1P58418 RNU6-1194P-201ENST00000516208 104 ntBASIC1.16□□□□□ -2.22
CLRN1P58418 RNU6-162P-201ENST00000516228 103 ntBASIC1.16□□□□□ -2.22
CLRN1P58418 RNU6-765P-201ENST00000516916 99 ntBASIC1.16□□□□□ -2.22
CLRN1P58418 RNU6-850P-201ENST00000516934 103 ntBASIC1.16□□□□□ -2.22
CLRN1P58418 RNA5SP404-201ENST00000517118 132 ntBASIC1.16□□□□□ -2.22
CLRN1P58418 AC103810.7-201ENST00000607821 91 ntBASIC1.16□□□□□ -2.22
CLRN1P58418 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.16□□□□□ -2.22
CLRN1P58418 U7.3-201ENST00000616123 62 ntBASIC1.16□□□□□ -2.22
CLRN1P58418 MALAT1.1-201ENST00000618249 95 ntBASIC1.16□□□□□ -2.22
CLRN1P58418 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
CLRN1P58418 Y_RNA.96-201ENST00000363092 109 ntBASIC1.15□□□□□ -2.23
CLRN1P58418 RNY1P10-201ENST00000363268 113 ntBASIC1.15□□□□□ -2.23
CLRN1P58418 MIR520F-201ENST00000384824 87 ntBASIC1.15□□□□□ -2.23
CLRN1P58418 SNORD89-201ENST00000390981 114 ntBASIC1.15□□□□□ -2.23
CLRN1P58418 RNU1-119P-201ENST00000391122 165 ntBASIC1.15□□□□□ -2.23
CLRN1P58418 RNU4-62P-201ENST00000410125 130 ntBASIC1.15□□□□□ -2.23
CLRN1P58418 BTF3P4-201ENST00000418852 495 ntBASIC1.15□□□□□ -2.23
CLRN1P58418 MIR4421-201ENST00000578133 69 ntBASIC1.15□□□□□ -2.23
CLRN1P58418 MIR5582-201ENST00000579697 68 ntBASIC1.15□□□□□ -2.23
CLRN1P58418 AC008608.1-201ENST00000603910 127 ntBASIC1.15□□□□□ -2.23
CLRN1P58418 MIR101-2-201ENST00000362195 79 ntBASIC1.14□□□□□ -2.23
CLRN1P58418 RNU6-1131P-201ENST00000364955 107 ntBASIC1.14□□□□□ -2.23
CLRN1P58418 MIR150-201ENST00000385048 84 ntBASIC1.14□□□□□ -2.23
CLRN1P58418 RNU6-972P-201ENST00000391208 107 ntBASIC1.14□□□□□ -2.23
CLRN1P58418 MIR942-201ENST00000401111 86 ntBASIC1.14□□□□□ -2.23
CLRN1P58418 RNU6-887P-201ENST00000410660 100 ntBASIC1.14□□□□□ -2.23
CLRN1P58418 FABP5P4-201ENST00000437203 171 ntBASIC1.14□□□□□ -2.23
CLRN1P58418 AL157834.3-201ENST00000615543 103 ntBASIC1.14□□□□□ -2.23
CLRN1P58418 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.13□□□□□ -2.23
CLRN1P58418 Y_RNA.290-201ENST00000364879 114 ntBASIC1.13□□□□□ -2.23
CLRN1P58418 MIR200A-201ENST00000384875 90 ntBASIC1.13□□□□□ -2.23
CLRN1P58418 MIR181B2-201ENST00000385004 89 ntBASIC1.13□□□□□ -2.23
CLRN1P58418 SNORD100-201ENST00000408573 76 ntBASIC1.13□□□□□ -2.23
CLRN1P58418 AP1B1P2-201ENST00000416196 106 ntBASIC1.13□□□□□ -2.23
CLRN1P58418 RMST_2.1-201ENST00000617263 136 ntBASIC1.13□□□□□ -2.23
CLRN1P58418 Y_RNA.43-201ENST00000362670 111 ntBASIC1.12□□□□□ -2.23
CLRN1P58418 Y_RNA.57-201ENST00000362806 113 ntBASIC1.12□□□□□ -2.23
CLRN1P58418 RNU6-1255P-201ENST00000363434 112 ntBASIC1.12□□□□□ -2.23
CLRN1P58418 SNORA7.1-201ENST00000363750 139 ntBASIC1.12□□□□□ -2.23
CLRN1P58418 RNU1-124P-201ENST00000363861 145 ntBASIC1.12□□□□□ -2.23
CLRN1P58418 RNY1P7-201ENST00000384743 110 ntBASIC1.12□□□□□ -2.23
CLRN1P58418 RNU7-95P-201ENST00000459222 64 ntBASIC1.12□□□□□ -2.23
CLRN1P58418 AC004223.1-201ENST00000479840 271 ntBASIC1.12□□□□□ -2.23
CLRN1P58418 TRMT112P2-201ENST00000512910 132 ntBASIC1.12□□□□□ -2.23
CLRN1P58418 RNU6-1110P-201ENST00000516462 101 ntBASIC1.12□□□□□ -2.23
CLRN1P58418 Y_RNA.697-201ENST00000516776 113 ntBASIC1.12□□□□□ -2.23
CLRN1P58418 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.12□□□□□ -2.23
CLRN1P58418 AC068338.1-201ENST00000565567 176 ntBASIC1.12□□□□□ -2.23
CLRN1P58418 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.11□□□□□ -2.23
CLRN1P58418 RNU6-1125P-201ENST00000363601 107 ntBASIC1.11□□□□□ -2.23
CLRN1P58418 Y_RNA.164-201ENST00000363709 102 ntBASIC1.11□□□□□ -2.23
CLRN1P58418 Y_RNA.220-201ENST00000364244 109 ntBASIC1.11□□□□□ -2.23
CLRN1P58418 SNORD58A-201ENST00000383875 65 ntBASIC1.11□□□□□ -2.23
CLRN1P58418 RNU6-49P-201ENST00000384256 107 ntBASIC1.11□□□□□ -2.23
CLRN1P58418 RNU6-480P-201ENST00000384332 107 ntBASIC1.11□□□□□ -2.23
CLRN1P58418 SNORA40.6-201ENST00000391153 128 ntBASIC1.11□□□□□ -2.23
CLRN1P58418 U7.7-201ENST00000459276 60 ntBASIC1.11□□□□□ -2.23
CLRN1P58418 AL359821.1-201ENST00000605519 182 ntBASIC1.11□□□□□ -2.23
CLRN1P58418 AL136317.1-201ENST00000612653 226 ntBASIC1.11□□□□□ -2.23
CLRN1P58418 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
CLRN1P58418 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
CLRN1P58418 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
CLRN1P58418 Y_RNA.56-201ENST00000362798 112 ntBASIC1.1□□□□□ -2.23
CLRN1P58418 Y_RNA.369-201ENST00000365568 117 ntBASIC1.1□□□□□ -2.23
CLRN1P58418 MIR520H-201ENST00000385126 88 ntBASIC1.1□□□□□ -2.23
CLRN1P58418 MIR618-201ENST00000385287 98 ntBASIC1.1□□□□□ -2.23
CLRN1P58418 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.1□□□□□ -2.23
CLRN1P58418 Y_RNA.4-201ENST00000362333 112 ntBASIC1.09□□□□□ -2.23
CLRN1P58418 Y_RNA.190-201ENST00000363964 101 ntBASIC1.09□□□□□ -2.23
CLRN1P58418 SNORD114-24-201ENST00000365029 72 ntBASIC1.09□□□□□ -2.23
CLRN1P58418 Y_RNA.536-201ENST00000384621 113 ntBASIC1.09□□□□□ -2.23
CLRN1P58418 RNU6-291P-201ENST00000384720 107 ntBASIC1.09□□□□□ -2.23
CLRN1P58418 MIR635-201ENST00000384830 98 ntBASIC1.09□□□□□ -2.23
CLRN1P58418 MIR516A2-201ENST00000384888 90 ntBASIC1.09□□□□□ -2.23
CLRN1P58418 MIR516A1-201ENST00000385033 90 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 178.2 ms