Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 Y_RNA.272-201ENST00000364696 102 ntBASIC0.18□□□□□ -2.38
LIMK1P53667 RNU4-11P-201ENST00000365287 132 ntBASIC0.18□□□□□ -2.38
LIMK1P53667 MIR4500-201ENST00000579472 76 ntBASIC0.18□□□□□ -2.38
LIMK1P53667 MIR4768-201ENST00000585270 74 ntBASIC0.18□□□□□ -2.38
LIMK1P53667 RNU6-151P-201ENST00000364158 107 ntBASIC0.17□□□□□ -2.38
LIMK1P53667 RNY1P2-201ENST00000364820 117 ntBASIC0.17□□□□□ -2.38
LIMK1P53667 RNU6-429P-201ENST00000384582 108 ntBASIC0.17□□□□□ -2.38
LIMK1P53667 RNU6-1135P-201ENST00000411083 103 ntBASIC0.17□□□□□ -2.38
LIMK1P53667 Y_RNA.651-201ENST00000459380 103 ntBASIC0.17□□□□□ -2.38
LIMK1P53667 SNORA81.3-201ENST00000517283 198 ntBASIC0.17□□□□□ -2.38
LIMK1P53667 MIR548H5-201ENST00000580314 60 ntBASIC0.17□□□□□ -2.38
LIMK1P53667 MIR6828-201ENST00000636181 60 ntBASIC0.17□□□□□ -2.38
LIMK1P53667 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.17□□□□□ -2.38
LIMK1P53667 SNORD115-24-201ENST00000363528 82 ntBASIC0.16□□□□□ -2.38
LIMK1P53667 RNY1P11-201ENST00000363759 113 ntBASIC0.16□□□□□ -2.38
LIMK1P53667 Y_RNA.441-201ENST00000384123 112 ntBASIC0.16□□□□□ -2.38
LIMK1P53667 Y_RNA.700-201ENST00000516806 100 ntBASIC0.16□□□□□ -2.38
LIMK1P53667 AC069113.3-201ENST00000521019 150 ntBASIC0.16□□□□□ -2.38
LIMK1P53667 AC138869.1-201ENST00000568623 124 ntBASIC0.16□□□□□ -2.38
LIMK1P53667 MIR4802-201ENST00000581881 80 ntBASIC0.16□□□□□ -2.38
LIMK1P53667 RNU7-10P-201ENST00000607194 63 ntBASIC0.16□□□□□ -2.38
LIMK1P53667 TUG1_4.1-201ENST00000619464 181 ntBASIC0.16□□□□□ -2.38
LIMK1P53667 Y_RNA.98-201ENST00000363109 102 ntBASIC0.15□□□□□ -2.39
LIMK1P53667 RNU6-682P-201ENST00000363843 106 ntBASIC0.15□□□□□ -2.39
LIMK1P53667 Y_RNA.448-201ENST00000384185 108 ntBASIC0.15□□□□□ -2.39
LIMK1P53667 RNU6-1321P-201ENST00000390905 107 ntBASIC0.15□□□□□ -2.39
LIMK1P53667 MIR513C-201ENST00000401352 84 ntBASIC0.15□□□□□ -2.39
LIMK1P53667 RNU7-129P-201ENST00000516128 62 ntBASIC0.15□□□□□ -2.39
LIMK1P53667 AC004792.1-201ENST00000614523 137 ntBASIC0.15□□□□□ -2.39
LIMK1P53667 MIR4315-1-201ENST00000636800 73 ntBASIC0.15□□□□□ -2.39
LIMK1P53667 MIR4315-2-201ENST00000640925 73 ntBASIC0.15□□□□□ -2.39
LIMK1P53667 SNORA9.1-201ENST00000362412 131 ntBASIC0.14□□□□□ -2.39
LIMK1P53667 Y_RNA.257-201ENST00000364596 102 ntBASIC0.14□□□□□ -2.39
LIMK1P53667 RNU6-449P-201ENST00000383914 107 ntBASIC0.14□□□□□ -2.39
LIMK1P53667 MIR635-201ENST00000384830 98 ntBASIC0.14□□□□□ -2.39
LIMK1P53667 MIR206-201ENST00000384872 86 ntBASIC0.14□□□□□ -2.39
LIMK1P53667 RNU7-48P-201ENST00000458875 63 ntBASIC0.14□□□□□ -2.39
LIMK1P53667 Y_RNA.692-201ENST00000516627 105 ntBASIC0.14□□□□□ -2.39
LIMK1P53667 RNY4P20-201ENST00000516678 93 ntBASIC0.14□□□□□ -2.39
LIMK1P53667 AC096720.1-201ENST00000604441 183 ntBASIC0.14□□□□□ -2.39
LIMK1P53667 RNA5SP98-201ENST00000363158 137 ntBASIC0.13□□□□□ -2.39
LIMK1P53667 RNU6-865P-201ENST00000364772 107 ntBASIC0.13□□□□□ -2.39
LIMK1P53667 Y_RNA.778-201ENST00000620203 90 ntBASIC0.13□□□□□ -2.39
LIMK1P53667 Y_RNA.185-201ENST00000363894 100 ntBASIC0.12□□□□□ -2.39
LIMK1P53667 RNY4P3-201ENST00000365254 95 ntBASIC0.12□□□□□ -2.39
LIMK1P53667 RNU6-187P-201ENST00000384139 106 ntBASIC0.12□□□□□ -2.39
LIMK1P53667 PCNPP3-201ENST00000393579 471 ntBASIC0.12□□□□□ -2.39
LIMK1P53667 AC074198.2-201ENST00000508153 258 ntBASIC0.12□□□□□ -2.39
LIMK1P53667 AC108081.1-201ENST00000604358 221 ntBASIC0.12□□□□□ -2.39
LIMK1P53667 RNU6-460P-201ENST00000391158 108 ntBASIC0.11□□□□□ -2.39
LIMK1P53667 MIR1270-201ENST00000459320 83 ntBASIC0.11□□□□□ -2.39
LIMK1P53667 RNU7-2P-201ENST00000516096 62 ntBASIC0.11□□□□□ -2.39
LIMK1P53667 RNU7-6P-201ENST00000516845 62 ntBASIC0.11□□□□□ -2.39
LIMK1P53667 RNU6-182P-201ENST00000516970 105 ntBASIC0.11□□□□□ -2.39
LIMK1P53667 IGLVI-20-201ENST00000519296 130 ntBASIC0.11□□□□□ -2.39
LIMK1P53667 SNORD114-15-201ENST00000364687 72 ntBASIC0.1□□□□□ -2.39
LIMK1P53667 RNU6-915P-201ENST00000364943 103 ntBASIC0.1□□□□□ -2.39
LIMK1P53667 RNU6-1126P-201ENST00000384002 107 ntBASIC0.1□□□□□ -2.39
LIMK1P53667 RNU6-616P-201ENST00000384353 107 ntBASIC0.1□□□□□ -2.39
LIMK1P53667 RNU6-1104P-201ENST00000384723 104 ntBASIC0.1□□□□□ -2.39
LIMK1P53667 MIR760-201ENST00000390220 80 ntBASIC0.1□□□□□ -2.39
LIMK1P53667 MIR759-201ENST00000390224 91 ntBASIC0.1□□□□□ -2.39
LIMK1P53667 MIR1295A-201ENST00000408463 79 ntBASIC0.1□□□□□ -2.39
LIMK1P53667 RNU7-104P-201ENST00000459398 79 ntBASIC0.1□□□□□ -2.39
LIMK1P53667 RNU6-758P-201ENST00000516292 89 ntBASIC0.1□□□□□ -2.39
LIMK1P53667 AP001362.1-201ENST00000625165 124 ntBASIC0.1□□□□□ -2.39
LIMK1P53667 MIR371B-201ENST00000638082 66 ntBASIC0.1□□□□□ -2.39
LIMK1P53667 Y_RNA.8-201ENST00000362353 102 ntBASIC0.09□□□□□ -2.4
LIMK1P53667 Y_RNA.328-201ENST00000365208 113 ntBASIC0.09□□□□□ -2.4
LIMK1P53667 SNORD116-18-201ENST00000383961 92 ntBASIC0.09□□□□□ -2.4
LIMK1P53667 Y_RNA.785-201ENST00000384290 109 ntBASIC0.09□□□□□ -2.4
LIMK1P53667 AC244505.6-201ENST00000452829 130 ntBASIC0.09□□□□□ -2.4
LIMK1P53667 MIR4752-201ENST00000579672 72 ntBASIC0.09□□□□□ -2.4
LIMK1P53667 MIR6755-201ENST00000619993 66 ntBASIC0.09□□□□□ -2.4
LIMK1P53667 RNA5SP214-201ENST00000363378 118 ntBASIC0.08□□□□□ -2.4
LIMK1P53667 Y_RNA.221-201ENST00000364248 96 ntBASIC0.08□□□□□ -2.4
LIMK1P53667 snosnR66.1-201ENST00000391095 99 ntBASIC0.08□□□□□ -2.4
LIMK1P53667 BX276092.1-201ENST00000427368 251 ntBASIC0.08□□□□□ -2.4
LIMK1P53667 MIR3121-201ENST00000579680 77 ntBASIC0.08□□□□□ -2.4
LIMK1P53667 AC021753.1-201ENST00000635724 168 ntBASIC0.08□□□□□ -2.4
LIMK1P53667 RNU6-1130P-201ENST00000365434 107 ntBASIC0.07□□□□□ -2.4
LIMK1P53667 SNORA42.1-201ENST00000363515 137 ntBASIC0.06□□□□□ -2.4
LIMK1P53667 SNORD115-35-201ENST00000365122 82 ntBASIC0.06□□□□□ -2.4
LIMK1P53667 MIR599-201ENST00000385069 95 ntBASIC0.06□□□□□ -2.4
LIMK1P53667 RNU6-848P-201ENST00000515948 107 ntBASIC0.06□□□□□ -2.4
LIMK1P53667 RNU6-617P-201ENST00000516147 107 ntBASIC0.06□□□□□ -2.4
LIMK1P53667 RNU6-473P-201ENST00000516164 107 ntBASIC0.06□□□□□ -2.4
LIMK1P53667 RNU6-1049P-201ENST00000516414 107 ntBASIC0.06□□□□□ -2.4
LIMK1P53667 AP001328.1-201ENST00000528550 176 ntBASIC0.06□□□□□ -2.4
LIMK1P53667 Y_RNA.580-201ENST00000391004 95 ntBASIC0.05□□□□□ -2.4
LIMK1P53667 MIR548I2-201ENST00000408348 149 ntBASIC0.05□□□□□ -2.4
LIMK1P53667 RPL39P34-201ENST00000477141 156 ntBASIC0.05□□□□□ -2.4
LIMK1P53667 TRAJ51-201ENST00000504127 63 ntBASIC0.05□□□□□ -2.4
LIMK1P53667 RNU7-161P-201ENST00000517289 62 ntBASIC0.05□□□□□ -2.4
LIMK1P53667 Y_RNA.127-201ENST00000363386 109 ntBASIC0.04□□□□□ -2.4
LIMK1P53667 RNU6-726P-201ENST00000364680 107 ntBASIC0.04□□□□□ -2.4
LIMK1P53667 Y_RNA.270-201ENST00000364693 104 ntBASIC0.04□□□□□ -2.4
LIMK1P53667 RNA5SP128-201ENST00000365305 116 ntBASIC0.04□□□□□ -2.4
LIMK1P53667 MIR610-201ENST00000385139 96 ntBASIC0.04□□□□□ -2.4
LIMK1P53667 MIR643-201ENST00000385267 97 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 262.8 ms