Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 AC243829.6-201ENST00000612652 106 ntBASIC0.51□□□□□ -2.33
CLCN4P51793 U6.109-201ENST00000636749 87 ntBASIC0.51□□□□□ -2.33
CLCN4P51793 MTND5P18-201ENST00000445624 1801 ntBASIC0.5□□□□□ -2.33
CLCN4P51793 RNU6-81P-201ENST00000365608 104 ntBASIC0.5□□□□□ -2.33
CLCN4P51793 RNU6-945P-201ENST00000383947 107 ntBASIC0.5□□□□□ -2.33
CLCN4P51793 Y_RNA.536-201ENST00000384621 113 ntBASIC0.5□□□□□ -2.33
CLCN4P51793 RNU6-291P-201ENST00000384720 107 ntBASIC0.5□□□□□ -2.33
CLCN4P51793 MIR548D2-201ENST00000384955 97 ntBASIC0.5□□□□□ -2.33
CLCN4P51793 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.5□□□□□ -2.33
CLCN4P51793 Y_RNA.630-201ENST00000411370 108 ntBASIC0.5□□□□□ -2.33
CLCN4P51793 AL157398.1-201ENST00000452981 186 ntBASIC0.5□□□□□ -2.33
CLCN4P51793 RNU7-48P-201ENST00000458875 63 ntBASIC0.5□□□□□ -2.33
CLCN4P51793 RNU6-1211P-201ENST00000459179 105 ntBASIC0.5□□□□□ -2.33
CLCN4P51793 RNU6-659P-201ENST00000516454 104 ntBASIC0.5□□□□□ -2.33
CLCN4P51793 RNU6-531P-201ENST00000516694 104 ntBASIC0.5□□□□□ -2.33
CLCN4P51793 RNU7-6P-201ENST00000516845 62 ntBASIC0.5□□□□□ -2.33
CLCN4P51793 Y_RNA.773-201ENST00000607168 90 ntBASIC0.5□□□□□ -2.33
CLCN4P51793 AC105081.1-201ENST00000617727 106 ntBASIC0.5□□□□□ -2.33
CLCN4P51793 MIR3914-2-201ENST00000637339 95 ntBASIC0.5□□□□□ -2.33
CLCN4P51793 Y_RNA.32-201ENST00000362589 110 ntBASIC0.49□□□□□ -2.33
CLCN4P51793 Y_RNA.119-201ENST00000363301 96 ntBASIC0.49□□□□□ -2.33
CLCN4P51793 Y_RNA.127-201ENST00000363386 109 ntBASIC0.49□□□□□ -2.33
CLCN4P51793 Y_RNA.174-201ENST00000363781 105 ntBASIC0.49□□□□□ -2.33
CLCN4P51793 Y_RNA.346-201ENST00000365385 112 ntBASIC0.49□□□□□ -2.33
CLCN4P51793 VTRNA1-3-201ENST00000365645 89 ntBASIC0.49□□□□□ -2.33
CLCN4P51793 RNY1P8-201ENST00000383970 114 ntBASIC0.49□□□□□ -2.33
CLCN4P51793 Y_RNA.448-201ENST00000384185 108 ntBASIC0.49□□□□□ -2.33
CLCN4P51793 SNORA72.6-201ENST00000384520 129 ntBASIC0.49□□□□□ -2.33
CLCN4P51793 RNU6-429P-201ENST00000384582 108 ntBASIC0.49□□□□□ -2.33
CLCN4P51793 MIR140-201ENST00000385282 100 ntBASIC0.49□□□□□ -2.33
CLCN4P51793 SUMO1P3-201ENST00000439961 304 ntBASIC0.49□□□□□ -2.33
CLCN4P51793 RNU7-107P-201ENST00000459121 61 ntBASIC0.49□□□□□ -2.33
CLCN4P51793 RNU6-1061P-201ENST00000516530 99 ntBASIC0.49□□□□□ -2.33
CLCN4P51793 MTND5P34-201ENST00000568888 325 ntBASIC0.49□□□□□ -2.33
CLCN4P51793 AL109933.3-201ENST00000619095 188 ntBASIC0.49□□□□□ -2.33
CLCN4P51793 Y_RNA.71-201ENST00000362892 104 ntBASIC0.48□□□□□ -2.33
CLCN4P51793 Y_RNA.98-201ENST00000363109 102 ntBASIC0.48□□□□□ -2.33
CLCN4P51793 MIR759-201ENST00000390224 91 ntBASIC0.48□□□□□ -2.33
CLCN4P51793 AP001362.1-201ENST00000625165 124 ntBASIC0.48□□□□□ -2.33
CLCN4P51793 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.47□□□□□ -2.33
CLCN4P51793 AL157777.2-201ENST00000258070 137 ntBASIC0.47□□□□□ -2.33
CLCN4P51793 RNY4P6-201ENST00000363667 96 ntBASIC0.47□□□□□ -2.33
CLCN4P51793 Y_RNA.328-201ENST00000365208 113 ntBASIC0.47□□□□□ -2.33
CLCN4P51793 RNA5SP117-201ENST00000365294 118 ntBASIC0.47□□□□□ -2.33
CLCN4P51793 SNORD116-14-201ENST00000383894 92 ntBASIC0.47□□□□□ -2.33
CLCN4P51793 SNORD116-17-201ENST00000383929 92 ntBASIC0.47□□□□□ -2.33
CLCN4P51793 SNORD116-15-201ENST00000384445 92 ntBASIC0.47□□□□□ -2.33
CLCN4P51793 Y_RNA.563-201ENST00000384707 108 ntBASIC0.47□□□□□ -2.33
CLCN4P51793 SNORD116-19-201ENST00000384729 92 ntBASIC0.47□□□□□ -2.33
CLCN4P51793 TMSB4XP3-201ENST00000445144 114 ntBASIC0.47□□□□□ -2.33
CLCN4P51793 SNORA31.14-201ENST00000516728 116 ntBASIC0.47□□□□□ -2.33
CLCN4P51793 RNU6-135P-201ENST00000516769 101 ntBASIC0.47□□□□□ -2.33
CLCN4P51793 MIR376B-201ENST00000614515 100 ntBASIC0.47□□□□□ -2.33
CLCN4P51793 MIR1255B1-201ENST00000636325 63 ntBASIC0.47□□□□□ -2.33
CLCN4P51793 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.47□□□□□ -2.33
CLCN4P51793 Y_RNA.56-201ENST00000362798 112 ntBASIC0.46□□□□□ -2.34
CLCN4P51793 SNORD18A-201ENST00000363753 72 ntBASIC0.46□□□□□ -2.34
CLCN4P51793 Y_RNA.344-201ENST00000365381 112 ntBASIC0.46□□□□□ -2.34
CLCN4P51793 RNU6-716P-201ENST00000365621 103 ntBASIC0.46□□□□□ -2.34
CLCN4P51793 Y_RNA.525-201ENST00000384570 113 ntBASIC0.46□□□□□ -2.34
CLCN4P51793 RNU6-959P-201ENST00000384671 107 ntBASIC0.46□□□□□ -2.34
CLCN4P51793 RNU6-535P-201ENST00000384722 107 ntBASIC0.46□□□□□ -2.34
CLCN4P51793 MIR1197-201ENST00000408818 88 ntBASIC0.46□□□□□ -2.34
CLCN4P51793 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.46□□□□□ -2.34
CLCN4P51793 AL353813.1-201ENST00000440700 253 ntBASIC0.46□□□□□ -2.34
CLCN4P51793 Y_RNA.697-201ENST00000516776 113 ntBASIC0.46□□□□□ -2.34
CLCN4P51793 RNA5SP94-201ENST00000516917 108 ntBASIC0.46□□□□□ -2.34
CLCN4P51793 MIR4679-2-201ENST00000578358 77 ntBASIC0.46□□□□□ -2.34
CLCN4P51793 MIR3678-201ENST00000578455 94 ntBASIC0.46□□□□□ -2.34
CLCN4P51793 RNU6-363P-201ENST00000362895 105 ntBASIC0.45□□□□□ -2.34
CLCN4P51793 RNU6-679P-201ENST00000391003 106 ntBASIC0.45□□□□□ -2.34
CLCN4P51793 AL603908.1-201ENST00000406098 201 ntBASIC0.45□□□□□ -2.34
CLCN4P51793 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.45□□□□□ -2.34
CLCN4P51793 RN7SKP12-201ENST00000516275 143 ntBASIC0.45□□□□□ -2.34
CLCN4P51793 RNU6-521P-201ENST00000516663 105 ntBASIC0.45□□□□□ -2.34
CLCN4P51793 DEFB131E-201ENST00000532329 154 ntBASIC0.45□□□□□ -2.34
CLCN4P51793 U6.95-201ENST00000636931 70 ntBASIC0.45□□□□□ -2.34
CLCN4P51793 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
CLCN4P51793 RNU6-865P-201ENST00000364772 107 ntBASIC0.44□□□□□ -2.34
CLCN4P51793 MIR34C-201ENST00000384831 77 ntBASIC0.44□□□□□ -2.34
CLCN4P51793 AC244505.6-201ENST00000452829 130 ntBASIC0.44□□□□□ -2.34
CLCN4P51793 RNU6-1018P-201ENST00000516577 106 ntBASIC0.44□□□□□ -2.34
CLCN4P51793 RNU6-1006P-201ENST00000516998 103 ntBASIC0.44□□□□□ -2.34
CLCN4P51793 MIR6828-201ENST00000636181 60 ntBASIC0.44□□□□□ -2.34
CLCN4P51793 RNU6-1313P-201ENST00000362622 102 ntBASIC0.43□□□□□ -2.34
CLCN4P51793 Y_RNA.85-201ENST00000363014 111 ntBASIC0.43□□□□□ -2.34
CLCN4P51793 RNA5SP245-201ENST00000364239 121 ntBASIC0.43□□□□□ -2.34
CLCN4P51793 RNU4-67P-201ENST00000364569 141 ntBASIC0.43□□□□□ -2.34
CLCN4P51793 SNORD113-1-201ENST00000365321 69 ntBASIC0.43□□□□□ -2.34
CLCN4P51793 Y_RNA.353-201ENST00000365440 108 ntBASIC0.43□□□□□ -2.34
CLCN4P51793 Y_RNA.360-201ENST00000365512 102 ntBASIC0.43□□□□□ -2.34
CLCN4P51793 Y_RNA.362-201ENST00000365518 110 ntBASIC0.43□□□□□ -2.34
CLCN4P51793 MIR519A1-201ENST00000385257 85 ntBASIC0.43□□□□□ -2.34
CLCN4P51793 MIR644A-201ENST00000385262 94 ntBASIC0.43□□□□□ -2.34
CLCN4P51793 MIR548I2-201ENST00000408348 149 ntBASIC0.43□□□□□ -2.34
CLCN4P51793 SNRPGP12-201ENST00000449481 213 ntBASIC0.43□□□□□ -2.34
CLCN4P51793 RPL39P34-201ENST00000477141 156 ntBASIC0.43□□□□□ -2.34
CLCN4P51793 MIR4639-201ENST00000584938 69 ntBASIC0.43□□□□□ -2.34
CLCN4P51793 SNORA36.1-201ENST00000363424 132 ntBASIC0.42□□□□□ -2.34
CLCN4P51793 SNORD33.1-201ENST00000516213 88 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 176.1 ms