Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AC084768.2-201ENST00000622736 221 ntBASIC2□□□□□ -2.09
USP11P51784 SNORA63.2-201ENST00000362603 126 ntBASIC1.99□□□□□ -2.09
USP11P51784 RNU6-523P-201ENST00000516304 54 ntBASIC1.99□□□□□ -2.09
USP11P51784 MIR4796-201ENST00000580742 81 ntBASIC1.99□□□□□ -2.09
USP11P51784 U7.4-201ENST00000614961 63 ntBASIC1.99□□□□□ -2.09
USP11P51784 AL161722.3-201ENST00000605789 2983 ntBASIC1.98□□□□□ -2.09
USP11P51784 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
USP11P51784 MIRLET7A1-201ENST00000362295 80 ntBASIC1.98□□□□□ -2.09
USP11P51784 RNU6-580P-201ENST00000365159 107 ntBASIC1.98□□□□□ -2.09
USP11P51784 RNU6-132P-201ENST00000383863 107 ntBASIC1.98□□□□□ -2.09
USP11P51784 SNORA72.6-201ENST00000384520 129 ntBASIC1.98□□□□□ -2.09
USP11P51784 MT-TF-201ENST00000387314 71 ntBASIC1.98□□□□□ -2.09
USP11P51784 RNU6-557P-201ENST00000516842 110 ntBASIC1.98□□□□□ -2.09
USP11P51784 MIR8074-201ENST00000615081 81 ntBASIC1.98□□□□□ -2.09
USP11P51784 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.98□□□□□ -2.09
USP11P51784 RNA5SP264-201ENST00000363115 107 ntBASIC1.97□□□□□ -2.09
USP11P51784 Y_RNA.338-201ENST00000365320 114 ntBASIC1.97□□□□□ -2.09
USP11P51784 RNU6-1254P-201ENST00000391266 104 ntBASIC1.97□□□□□ -2.09
USP11P51784 AC004223.1-201ENST00000479840 271 ntBASIC1.97□□□□□ -2.09
USP11P51784 SNORA18.5-201ENST00000516616 101 ntBASIC1.97□□□□□ -2.09
USP11P51784 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.97□□□□□ -2.09
USP11P51784 MIR4536-1-201ENST00000583537 88 ntBASIC1.97□□□□□ -2.09
USP11P51784 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
USP11P51784 MIR302D-201ENST00000362275 68 ntBASIC1.96□□□□□ -2.1
USP11P51784 Y_RNA.283-201ENST00000364798 112 ntBASIC1.96□□□□□ -2.1
USP11P51784 RNU6-811P-201ENST00000384069 107 ntBASIC1.96□□□□□ -2.1
USP11P51784 RNU11-2P-201ENST00000516898 142 ntBASIC1.96□□□□□ -2.1
USP11P51784 MIR8063-201ENST00000621930 81 ntBASIC1.96□□□□□ -2.1
USP11P51784 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
USP11P51784 MIR377-201ENST00000362145 69 ntBASIC1.95□□□□□ -2.1
USP11P51784 RNU6-1094P-201ENST00000362416 104 ntBASIC1.95□□□□□ -2.1
USP11P51784 SNORD48-201ENST00000364953 64 ntBASIC1.95□□□□□ -2.1
USP11P51784 SCARNA18B-201ENST00000458806 135 ntBASIC1.95□□□□□ -2.1
USP11P51784 MIR3064-201ENST00000581130 66 ntBASIC1.95□□□□□ -2.1
USP11P51784 AC103810.8-201ENST00000607347 118 ntBASIC1.95□□□□□ -2.1
USP11P51784 MIR103A2-201ENST00000362154 78 ntBASIC1.94□□□□□ -2.1
USP11P51784 RNU6-161P-201ENST00000363051 106 ntBASIC1.94□□□□□ -2.1
USP11P51784 RNU6-686P-201ENST00000364839 107 ntBASIC1.94□□□□□ -2.1
USP11P51784 RNU1-36P-201ENST00000365130 165 ntBASIC1.94□□□□□ -2.1
USP11P51784 RNU6-243P-201ENST00000391140 107 ntBASIC1.94□□□□□ -2.1
USP11P51784 snoU13.21-201ENST00000459368 105 ntBASIC1.94□□□□□ -2.1
USP11P51784 RNU6-957P-201ENST00000363652 99 ntBASIC1.93□□□□□ -2.1
USP11P51784 Y_RNA.532-201ENST00000384590 113 ntBASIC1.93□□□□□ -2.1
USP11P51784 RNU6-788P-201ENST00000390967 104 ntBASIC1.93□□□□□ -2.1
USP11P51784 SNORD90-201ENST00000391145 111 ntBASIC1.93□□□□□ -2.1
USP11P51784 SNORD93-201ENST00000408813 74 ntBASIC1.93□□□□□ -2.1
USP11P51784 SNORD63B-201ENST00000411005 70 ntBASIC1.93□□□□□ -2.1
USP11P51784 RNU6-1108P-201ENST00000516308 104 ntBASIC1.93□□□□□ -2.1
USP11P51784 SNORA25.15-201ENST00000516487 89 ntBASIC1.93□□□□□ -2.1
USP11P51784 SNORA44.1-201ENST00000517031 108 ntBASIC1.93□□□□□ -2.1
USP11P51784 MIR3122-201ENST00000577243 73 ntBASIC1.93□□□□□ -2.1
USP11P51784 AC104996.3-201ENST00000590718 94 ntBASIC1.93□□□□□ -2.1
USP11P51784 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.93□□□□□ -2.1
USP11P51784 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
USP11P51784 RNU4-58P-201ENST00000363192 141 ntBASIC1.92□□□□□ -2.1
USP11P51784 Y_RNA.545-201ENST00000384652 105 ntBASIC1.92□□□□□ -2.1
USP11P51784 MIR30A-201ENST00000385092 71 ntBASIC1.92□□□□□ -2.1
USP11P51784 MIR18B-201ENST00000454574 71 ntBASIC1.92□□□□□ -2.1
USP11P51784 snoU13.9-201ENST00000458927 103 ntBASIC1.92□□□□□ -2.1
USP11P51784 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.92□□□□□ -2.1
USP11P51784 MIR502-201ENST00000606349 86 ntBASIC1.92□□□□□ -2.1
USP11P51784 MIR8081-201ENST00000611533 95 ntBASIC1.92□□□□□ -2.1
USP11P51784 MIRLET7F1-201ENST00000362202 87 ntBASIC1.91□□□□□ -2.1
USP11P51784 SNORD1A-201ENST00000364968 72 ntBASIC1.91□□□□□ -2.1
USP11P51784 MIR520H-201ENST00000385126 88 ntBASIC1.91□□□□□ -2.1
USP11P51784 SNORD100-201ENST00000408573 76 ntBASIC1.91□□□□□ -2.1
USP11P51784 AC108667.1-201ENST00000428618 249 ntBASIC1.91□□□□□ -2.1
USP11P51784 TRAJ51-201ENST00000504127 63 ntBASIC1.91□□□□□ -2.1
USP11P51784 RNU6-1194P-201ENST00000516208 104 ntBASIC1.91□□□□□ -2.1
USP11P51784 RNU6-165P-201ENST00000517170 99 ntBASIC1.91□□□□□ -2.1
USP11P51784 MIR3134-201ENST00000579433 74 ntBASIC1.91□□□□□ -2.1
USP11P51784 RNU6-403P-201ENST00000363163 104 ntBASIC1.9□□□□□ -2.11
USP11P51784 MIR4498-201ENST00000577599 66 ntBASIC1.9□□□□□ -2.11
USP11P51784 AC013244.2-201ENST00000603396 103 ntBASIC1.9□□□□□ -2.11
USP11P51784 Y_RNA.164-201ENST00000363709 102 ntBASIC1.89□□□□□ -2.11
USP11P51784 Y_RNA.491-201ENST00000384417 107 ntBASIC1.89□□□□□ -2.11
USP11P51784 SNORA17.3-201ENST00000391159 129 ntBASIC1.89□□□□□ -2.11
USP11P51784 FGF7P7-201ENST00000514120 227 ntBASIC1.89□□□□□ -2.11
USP11P51784 SNORD92-201ENST00000585078 85 ntBASIC1.89□□□□□ -2.11
USP11P51784 RNA5SP190-201ENST00000365222 118 ntBASIC1.88□□□□□ -2.11
USP11P51784 MIR518E-201ENST00000385252 88 ntBASIC1.88□□□□□ -2.11
USP11P51784 RNA5SP247-201ENST00000411181 105 ntBASIC1.88□□□□□ -2.11
USP11P51784 AL606490.4-201ENST00000423117 127 ntBASIC1.88□□□□□ -2.11
USP11P51784 RNU7-195P-201ENST00000458793 62 ntBASIC1.88□□□□□ -2.11
USP11P51784 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.88□□□□□ -2.11
USP11P51784 AC019176.1-201ENST00000518519 225 ntBASIC1.88□□□□□ -2.11
USP11P51784 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
USP11P51784 Y_RNA.536-201ENST00000384621 113 ntBASIC1.87□□□□□ -2.11
USP11P51784 MIR635-201ENST00000384830 98 ntBASIC1.87□□□□□ -2.11
USP11P51784 RNU6-466P-201ENST00000391224 103 ntBASIC1.87□□□□□ -2.11
USP11P51784 RNU7-185P-201ENST00000459215 60 ntBASIC1.87□□□□□ -2.11
USP11P51784 MIR3664-201ENST00000579074 99 ntBASIC1.87□□□□□ -2.11
USP11P51784 RNU6-53P-201ENST00000365367 106 ntBASIC1.86□□□□□ -2.11
USP11P51784 SNORD83.1-201ENST00000411362 77 ntBASIC1.86□□□□□ -2.11
USP11P51784 AC015818.7-201ENST00000428754 109 ntBASIC1.86□□□□□ -2.11
USP11P51784 SNORD13-201ENST00000459299 104 ntBASIC1.86□□□□□ -2.11
USP11P51784 RNU6-1053P-201ENST00000515930 101 ntBASIC1.86□□□□□ -2.11
USP11P51784 Y_RNA.660-201ENST00000516002 120 ntBASIC1.86□□□□□ -2.11
USP11P51784 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.86□□□□□ -2.11
USP11P51784 AC023934.1-201ENST00000574529 2389 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 205.8 ms