Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
RNF144AP50876 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
RNF144AP50876 RNA5SP126-201ENST00000365092 109 ntBASIC2.17□□□□□ -2.06
RNF144AP50876 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2.17□□□□□ -2.06
RNF144AP50876 SNORD83.1-201ENST00000411362 77 ntBASIC2.17□□□□□ -2.06
RNF144AP50876 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.17□□□□□ -2.06
RNF144AP50876 DLEU2_3.1-201ENST00000620005 73 ntBASIC2.17□□□□□ -2.06
RNF144AP50876 U6.100-201ENST00000636230 99 ntBASIC2.17□□□□□ -2.06
RNF144AP50876 AL359851.1-201ENST00000569460 4997 ntBASIC2.16□□□□□ -2.06
RNF144AP50876 SNORA67.3-201ENST00000384366 140 ntBASIC2.16□□□□□ -2.06
RNF144AP50876 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.16□□□□□ -2.06
RNF144AP50876 MIRLET7G-201ENST00000362280 84 ntBASIC2.15□□□□□ -2.07
RNF144AP50876 RNU4-82P-201ENST00000362443 140 ntBASIC2.15□□□□□ -2.07
RNF144AP50876 MIR4435-1-201ENST00000582552 80 ntBASIC2.15□□□□□ -2.07
RNF144AP50876 MIR4713-201ENST00000582691 75 ntBASIC2.15□□□□□ -2.07
RNF144AP50876 MIR3675-201ENST00000583661 73 ntBASIC2.15□□□□□ -2.07
RNF144AP50876 RNU6-934P-201ENST00000365154 107 ntBASIC2.14□□□□□ -2.07
RNF144AP50876 AC097635.1-201ENST00000450678 155 ntBASIC2.14□□□□□ -2.07
RNF144AP50876 RNA5SP233-201ENST00000459153 113 ntBASIC2.14□□□□□ -2.07
RNF144AP50876 RNU6-765P-201ENST00000516916 99 ntBASIC2.14□□□□□ -2.07
RNF144AP50876 RNU7-156P-201ENST00000517214 74 ntBASIC2.14□□□□□ -2.07
RNF144AP50876 MIR3664-201ENST00000579074 99 ntBASIC2.14□□□□□ -2.07
RNF144AP50876 MIR4287-201ENST00000579398 78 ntBASIC2.14□□□□□ -2.07
RNF144AP50876 MIR5089-201ENST00000580047 84 ntBASIC2.14□□□□□ -2.07
RNF144AP50876 MIR1291-201ENST00000627649 87 ntBASIC2.14□□□□□ -2.07
RNF144AP50876 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
RNF144AP50876 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
RNF144AP50876 MIR599-201ENST00000385069 95 ntBASIC2.13□□□□□ -2.07
RNF144AP50876 RNU6-1052P-201ENST00000411398 104 ntBASIC2.13□□□□□ -2.07
RNF144AP50876 RNU6-719P-201ENST00000516671 104 ntBASIC2.13□□□□□ -2.07
RNF144AP50876 AC019176.1-201ENST00000518519 225 ntBASIC2.13□□□□□ -2.07
RNF144AP50876 AC138907.6-201ENST00000568401 126 ntBASIC2.13□□□□□ -2.07
RNF144AP50876 AC138869.1-201ENST00000568623 124 ntBASIC2.13□□□□□ -2.07
RNF144AP50876 SNORD53-201ENST00000579969 78 ntBASIC2.13□□□□□ -2.07
RNF144AP50876 AL627230.6-201ENST00000611129 280 ntBASIC2.13□□□□□ -2.07
RNF144AP50876 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
RNF144AP50876 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
RNF144AP50876 U8.2-201ENST00000363156 134 ntBASIC2.12□□□□□ -2.07
RNF144AP50876 SNORA16B-201ENST00000364674 135 ntBASIC2.12□□□□□ -2.07
RNF144AP50876 Y_RNA.330-201ENST00000365230 109 ntBASIC2.12□□□□□ -2.07
RNF144AP50876 Y_RNA.606-201ENST00000410579 103 ntBASIC2.12□□□□□ -2.07
RNF144AP50876 snoU13.9-201ENST00000458927 103 ntBASIC2.12□□□□□ -2.07
RNF144AP50876 AC104435.1-201ENST00000483483 166 ntBASIC2.12□□□□□ -2.07
RNF144AP50876 AC097510.1-201ENST00000510945 133 ntBASIC2.12□□□□□ -2.07
RNF144AP50876 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
RNF144AP50876 AC016717.2-201ENST00000609089 5141 ntBASIC2.11□□□□□ -2.07
RNF144AP50876 MIR17-201ENST00000385012 84 ntBASIC2.11□□□□□ -2.07
RNF144AP50876 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
RNF144AP50876 AC079140.2-201ENST00000506193 142 ntBASIC2.11□□□□□ -2.07
RNF144AP50876 MTRNR2L2-201ENST00000604882 87 ntBASIC2.11□□□□□ -2.07
RNF144AP50876 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
RNF144AP50876 SNORD113.3-201ENST00000364630 78 ntBASIC2.1□□□□□ -2.07
RNF144AP50876 RNU6-471P-201ENST00000383944 106 ntBASIC2.1□□□□□ -2.07
RNF144AP50876 RNU6-895P-201ENST00000384125 103 ntBASIC2.1□□□□□ -2.07
RNF144AP50876 MIR125B2-201ENST00000385128 89 ntBASIC2.1□□□□□ -2.07
RNF144AP50876 RNU6-935P-201ENST00000410371 100 ntBASIC2.1□□□□□ -2.07
RNF144AP50876 AL356379.1-201ENST00000414105 126 ntBASIC2.1□□□□□ -2.07
RNF144AP50876 AC093423.1-201ENST00000440817 142 ntBASIC2.1□□□□□ -2.07
RNF144AP50876 AC008413.1-201ENST00000511864 177 ntBASIC2.1□□□□□ -2.07
RNF144AP50876 RNA5SP24-201ENST00000516478 95 ntBASIC2.1□□□□□ -2.07
RNF144AP50876 MIR4771-2-201ENST00000577758 74 ntBASIC2.1□□□□□ -2.07
RNF144AP50876 MIR4771-1-201ENST00000582617 74 ntBASIC2.1□□□□□ -2.07
RNF144AP50876 MIR4448-201ENST00000584360 86 ntBASIC2.1□□□□□ -2.07
RNF144AP50876 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
RNF144AP50876 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.09□□□□□ -2.07
RNF144AP50876 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
RNF144AP50876 SNORD1A-201ENST00000364968 72 ntBASIC2.09□□□□□ -2.07
RNF144AP50876 RNU6-1065P-201ENST00000384513 106 ntBASIC2.09□□□□□ -2.07
RNF144AP50876 MIR451A-201ENST00000385059 72 ntBASIC2.09□□□□□ -2.07
RNF144AP50876 RNA5SP508-201ENST00000411327 119 ntBASIC2.09□□□□□ -2.07
RNF144AP50876 MIR3937-201ENST00000580135 106 ntBASIC2.09□□□□□ -2.07
RNF144AP50876 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
RNF144AP50876 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.09□□□□□ -2.08
RNF144AP50876 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
RNF144AP50876 MIR221-201ENST00000385135 110 ntBASIC2.08□□□□□ -2.08
RNF144AP50876 MIR6766-201ENST00000622641 72 ntBASIC2.08□□□□□ -2.08
RNF144AP50876 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
RNF144AP50876 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.08□□□□□ -2.08
RNF144AP50876 MIR302D-201ENST00000362275 68 ntBASIC2.07□□□□□ -2.08
RNF144AP50876 SNORD33-201ENST00000362761 85 ntBASIC2.07□□□□□ -2.08
RNF144AP50876 SNORD45.1-201ENST00000363181 77 ntBASIC2.07□□□□□ -2.08
RNF144AP50876 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
RNF144AP50876 SNORA24B-201ENST00000384176 131 ntBASIC2.07□□□□□ -2.08
RNF144AP50876 RNU6-630P-201ENST00000391258 106 ntBASIC2.07□□□□□ -2.08
RNF144AP50876 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.07□□□□□ -2.08
RNF144AP50876 MIR4299-201ENST00000577899 72 ntBASIC2.07□□□□□ -2.08
RNF144AP50876 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.07□□□□□ -2.08
RNF144AP50876 AC005520.4-201ENST00000604337 90 ntBASIC2.07□□□□□ -2.08
RNF144AP50876 U6.81-201ENST00000612550 106 ntBASIC2.07□□□□□ -2.08
RNF144AP50876 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
RNF144AP50876 MIR337-201ENST00000362281 93 ntBASIC2.06□□□□□ -2.08
RNF144AP50876 RNU6-824P-201ENST00000363724 104 ntBASIC2.06□□□□□ -2.08
RNF144AP50876 RNU4-52P-201ENST00000384209 138 ntBASIC2.06□□□□□ -2.08
RNF144AP50876 RNU6-301P-201ENST00000384277 107 ntBASIC2.06□□□□□ -2.08
RNF144AP50876 SNORD45A-201ENST00000384512 84 ntBASIC2.06□□□□□ -2.08
RNF144AP50876 RNU6-535P-201ENST00000384722 107 ntBASIC2.06□□□□□ -2.08
RNF144AP50876 RNU6-1057P-201ENST00000517162 102 ntBASIC2.06□□□□□ -2.08
RNF144AP50876 RNU6-165P-201ENST00000517170 99 ntBASIC2.06□□□□□ -2.08
RNF144AP50876 AC036111.3-201ENST00000526389 112 ntBASIC2.06□□□□□ -2.08
RNF144AP50876 MIR4298-201ENST00000584380 73 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 182.8 ms