Protein–RNA interactions for Protein: P49746

THBS3, Thrombospondin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3P49746 SNORD115-27-201ENST00000364430 82 ntBASIC1.17□□□□□ -2.22
THBS3P49746 RNU6-242P-201ENST00000384359 107 ntBASIC1.17□□□□□ -2.22
THBS3P49746 RNU6-1065P-201ENST00000384513 106 ntBASIC1.17□□□□□ -2.22
THBS3P49746 RNA5SP225-201ENST00000410874 135 ntBASIC1.17□□□□□ -2.22
THBS3P49746 RPS27P16-201ENST00000425758 201 ntBASIC1.17□□□□□ -2.22
THBS3P49746 SNRPGP12-201ENST00000449481 213 ntBASIC1.17□□□□□ -2.22
THBS3P49746 snoU13.21-201ENST00000459368 105 ntBASIC1.17□□□□□ -2.22
THBS3P49746 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.17□□□□□ -2.22
THBS3P49746 AL161722.3-201ENST00000605789 2983 ntBASIC1.17□□□□□ -2.22
THBS3P49746 ZNF209P-201ENST00000593450 2304 ntBASIC1.16□□□□□ -2.22
THBS3P49746 RNU6-509P-201ENST00000363519 107 ntBASIC1.16□□□□□ -2.22
THBS3P49746 RNU6-1125P-201ENST00000363601 107 ntBASIC1.16□□□□□ -2.22
THBS3P49746 RNU6-580P-201ENST00000365159 107 ntBASIC1.16□□□□□ -2.22
THBS3P49746 RNU6-787P-201ENST00000384032 107 ntBASIC1.16□□□□□ -2.22
THBS3P49746 RNU6-480P-201ENST00000384332 107 ntBASIC1.16□□□□□ -2.22
THBS3P49746 Y_RNA.611-201ENST00000410682 108 ntBASIC1.16□□□□□ -2.22
THBS3P49746 AC048334.1-201ENST00000477975 159 ntBASIC1.16□□□□□ -2.22
THBS3P49746 TRMT112P2-201ENST00000512910 132 ntBASIC1.16□□□□□ -2.22
THBS3P49746 RNA5SP61-201ENST00000516453 100 ntBASIC1.16□□□□□ -2.22
THBS3P49746 RNU6-850P-201ENST00000516934 103 ntBASIC1.16□□□□□ -2.22
THBS3P49746 RNU1-92P-201ENST00000517017 135 ntBASIC1.16□□□□□ -2.22
THBS3P49746 MIR548BB-201ENST00000626714 66 ntBASIC1.16□□□□□ -2.22
THBS3P49746 SNORD33-201ENST00000362761 85 ntBASIC1.15□□□□□ -2.23
THBS3P49746 Y_RNA.57-201ENST00000362806 113 ntBASIC1.15□□□□□ -2.23
THBS3P49746 Y_RNA.226-201ENST00000364337 114 ntBASIC1.15□□□□□ -2.23
THBS3P49746 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
THBS3P49746 Y_RNA.588-201ENST00000391254 102 ntBASIC1.15□□□□□ -2.23
THBS3P49746 MIR1255A-201ENST00000408338 113 ntBASIC1.15□□□□□ -2.23
THBS3P49746 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.15□□□□□ -2.23
THBS3P49746 Y_RNA.685-201ENST00000516532 108 ntBASIC1.15□□□□□ -2.23
THBS3P49746 SNORA25.16-201ENST00000516741 121 ntBASIC1.15□□□□□ -2.23
THBS3P49746 MIR4491-201ENST00000581087 68 ntBASIC1.15□□□□□ -2.23
THBS3P49746 AC006160.2-201ENST00000637708 154 ntBASIC1.15□□□□□ -2.23
THBS3P49746 AC008163.1-202ENST00000636004 2889 ntBASIC1.14□□□□□ -2.23
THBS3P49746 RNU6-633P-201ENST00000362612 103 ntBASIC1.14□□□□□ -2.23
THBS3P49746 Y_RNA.118-201ENST00000363300 101 ntBASIC1.14□□□□□ -2.23
THBS3P49746 SNORA7.1-201ENST00000363750 139 ntBASIC1.14□□□□□ -2.23
THBS3P49746 Y_RNA.330-201ENST00000365230 109 ntBASIC1.14□□□□□ -2.23
THBS3P49746 RNU6-571P-201ENST00000384128 107 ntBASIC1.14□□□□□ -2.23
THBS3P49746 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.14□□□□□ -2.23
THBS3P49746 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.14□□□□□ -2.23
THBS3P49746 SNORD93-201ENST00000408813 74 ntBASIC1.14□□□□□ -2.23
THBS3P49746 AC015818.7-201ENST00000428754 109 ntBASIC1.14□□□□□ -2.23
THBS3P49746 AC087499.7-201ENST00000441958 109 ntBASIC1.14□□□□□ -2.23
THBS3P49746 RNU7-171P-201ENST00000459581 62 ntBASIC1.14□□□□□ -2.23
THBS3P49746 RNU6-638P-201ENST00000516582 104 ntBASIC1.14□□□□□ -2.23
THBS3P49746 RNU6-531P-201ENST00000516694 104 ntBASIC1.14□□□□□ -2.23
THBS3P49746 RN7SKP88-201ENST00000516847 250 ntBASIC1.14□□□□□ -2.23
THBS3P49746 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.14□□□□□ -2.23
THBS3P49746 7SK.8-201ENST00000612110 250 ntBASIC1.14□□□□□ -2.23
THBS3P49746 7SK.11-201ENST00000615477 250 ntBASIC1.14□□□□□ -2.23
THBS3P49746 MIR8066-201ENST00000617280 78 ntBASIC1.14□□□□□ -2.23
THBS3P49746 7SK.13-201ENST00000622040 250 ntBASIC1.14□□□□□ -2.23
THBS3P49746 MIR3202-2-201ENST00000635980 79 ntBASIC1.14□□□□□ -2.23
THBS3P49746 RNU1-36P-201ENST00000365130 165 ntBASIC1.13□□□□□ -2.23
THBS3P49746 Y_RNA.363-201ENST00000365529 113 ntBASIC1.13□□□□□ -2.23
THBS3P49746 SNORA72.6-201ENST00000384520 129 ntBASIC1.13□□□□□ -2.23
THBS3P49746 SNORA75.2-201ENST00000391138 150 ntBASIC1.13□□□□□ -2.23
THBS3P49746 SNORA75.3-201ENST00000391231 150 ntBASIC1.13□□□□□ -2.23
THBS3P49746 SNORD83.1-201ENST00000411362 77 ntBASIC1.13□□□□□ -2.23
THBS3P49746 AL161932.1-201ENST00000437408 146 ntBASIC1.13□□□□□ -2.23
THBS3P49746 MIR18B-201ENST00000454574 71 ntBASIC1.13□□□□□ -2.23
THBS3P49746 MIR4421-201ENST00000578133 69 ntBASIC1.13□□□□□ -2.23
THBS3P49746 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
THBS3P49746 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.12□□□□□ -2.23
THBS3P49746 AC023934.1-201ENST00000574529 2389 ntBASIC1.12□□□□□ -2.23
THBS3P49746 RNU6-403P-201ENST00000363163 104 ntBASIC1.12□□□□□ -2.23
THBS3P49746 Y_RNA.313-201ENST00000365095 103 ntBASIC1.12□□□□□ -2.23
THBS3P49746 Y_RNA.426-201ENST00000384068 113 ntBASIC1.12□□□□□ -2.23
THBS3P49746 Y_RNA.437-201ENST00000384113 113 ntBASIC1.12□□□□□ -2.23
THBS3P49746 MIR758-201ENST00000390227 88 ntBASIC1.12□□□□□ -2.23
THBS3P49746 RNU6-519P-201ENST00000410590 108 ntBASIC1.12□□□□□ -2.23
THBS3P49746 RNU6-1054P-201ENST00000411293 104 ntBASIC1.12□□□□□ -2.23
THBS3P49746 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.12□□□□□ -2.23
THBS3P49746 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.12□□□□□ -2.23
THBS3P49746 SNORA31.2-201ENST00000516019 134 ntBASIC1.12□□□□□ -2.23
THBS3P49746 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.12□□□□□ -2.23
THBS3P49746 MIR7111-201ENST00000619751 72 ntBASIC1.12□□□□□ -2.23
THBS3P49746 Y_RNA.327-201ENST00000365201 102 ntBASIC1.11□□□□□ -2.23
THBS3P49746 RNU6-524P-201ENST00000384270 107 ntBASIC1.11□□□□□ -2.23
THBS3P49746 MIR516A2-201ENST00000384888 90 ntBASIC1.11□□□□□ -2.23
THBS3P49746 MIR516A1-201ENST00000385033 90 ntBASIC1.11□□□□□ -2.23
THBS3P49746 MIR150-201ENST00000385048 84 ntBASIC1.11□□□□□ -2.23
THBS3P49746 RNU1-78P-201ENST00000391248 165 ntBASIC1.11□□□□□ -2.23
THBS3P49746 RPS29P23-201ENST00000458635 123 ntBASIC1.11□□□□□ -2.23
THBS3P49746 RNU7-85P-201ENST00000458851 63 ntBASIC1.11□□□□□ -2.23
THBS3P49746 RNU7-185P-201ENST00000459215 60 ntBASIC1.11□□□□□ -2.23
THBS3P49746 RNA5SP395-201ENST00000516567 118 ntBASIC1.11□□□□□ -2.23
THBS3P49746 AC036111.3-201ENST00000526389 112 ntBASIC1.11□□□□□ -2.23
THBS3P49746 MIR4666B-201ENST00000578142 81 ntBASIC1.11□□□□□ -2.23
THBS3P49746 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.11□□□□□ -2.23
THBS3P49746 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
THBS3P49746 RNU4-58P-201ENST00000363192 141 ntBASIC1.1□□□□□ -2.23
THBS3P49746 SNORD113.3-201ENST00000364630 78 ntBASIC1.1□□□□□ -2.23
THBS3P49746 RNU6-53P-201ENST00000365367 106 ntBASIC1.1□□□□□ -2.23
THBS3P49746 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.1□□□□□ -2.23
THBS3P49746 SNORD4B-201ENST00000459083 72 ntBASIC1.1□□□□□ -2.23
THBS3P49746 snoU13.11-201ENST00000459219 104 ntBASIC1.1□□□□□ -2.23
THBS3P49746 AC023827.1-201ENST00000569247 97 ntBASIC1.1□□□□□ -2.23
THBS3P49746 MIR4422-201ENST00000581938 83 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 189.4 ms