Protein–RNA interactions for Protein: P47972

NPTX2, Neuronal pentraxin-2, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPTX2P47972 MIR100-201ENST00000385259 80 ntBASIC1.13□□□□□ -2.23
NPTX2P47972 MIR1827-201ENST00000408549 66 ntBASIC1.13□□□□□ -2.23
NPTX2P47972 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.13□□□□□ -2.23
NPTX2P47972 RNA5SP89-201ENST00000410300 108 ntBASIC1.13□□□□□ -2.23
NPTX2P47972 AC067940.1-201ENST00000458411 300 ntBASIC1.13□□□□□ -2.23
NPTX2P47972 RNU6-531P-201ENST00000516694 104 ntBASIC1.13□□□□□ -2.23
NPTX2P47972 MIR4500-201ENST00000579472 76 ntBASIC1.13□□□□□ -2.23
NPTX2P47972 MIR8070-201ENST00000616510 88 ntBASIC1.13□□□□□ -2.23
NPTX2P47972 MIR8066-201ENST00000617280 78 ntBASIC1.13□□□□□ -2.23
NPTX2P47972 AC091304.10-201ENST00000641554 121 ntBASIC1.13□□□□□ -2.23
NPTX2P47972 HSBP1P2-201ENST00000299671 229 ntBASIC1.12□□□□□ -2.23
NPTX2P47972 Y_RNA.13-201ENST00000362403 112 ntBASIC1.12□□□□□ -2.23
NPTX2P47972 SNORD114-27-201ENST00000363766 70 ntBASIC1.12□□□□□ -2.23
NPTX2P47972 SNORD45B-201ENST00000364617 72 ntBASIC1.12□□□□□ -2.23
NPTX2P47972 SNORD38.2-201ENST00000384470 69 ntBASIC1.12□□□□□ -2.23
NPTX2P47972 MIR548G-201ENST00000408442 89 ntBASIC1.12□□□□□ -2.23
NPTX2P47972 SNORD124-201ENST00000459577 104 ntBASIC1.12□□□□□ -2.23
NPTX2P47972 RNU6-795P-201ENST00000516323 103 ntBASIC1.12□□□□□ -2.23
NPTX2P47972 RNU6-977P-201ENST00000516411 103 ntBASIC1.12□□□□□ -2.23
NPTX2P47972 RNU7-156P-201ENST00000517214 74 ntBASIC1.12□□□□□ -2.23
NPTX2P47972 MIR4804-201ENST00000581683 73 ntBASIC1.12□□□□□ -2.23
NPTX2P47972 MIR4661-201ENST00000582720 75 ntBASIC1.12□□□□□ -2.23
NPTX2P47972 MIR6082-201ENST00000613604 109 ntBASIC1.12□□□□□ -2.23
NPTX2P47972 AC012531.4-201ENST00000616509 177 ntBASIC1.12□□□□□ -2.23
NPTX2P47972 AP001318.4-201ENST00000616637 121 ntBASIC1.12□□□□□ -2.23
NPTX2P47972 MIR96-201ENST00000362288 78 ntBASIC1.11□□□□□ -2.23
NPTX2P47972 Y_RNA.42-201ENST00000362660 108 ntBASIC1.11□□□□□ -2.23
NPTX2P47972 RNU6-170P-201ENST00000362832 104 ntBASIC1.11□□□□□ -2.23
NPTX2P47972 RNU4-58P-201ENST00000363192 141 ntBASIC1.11□□□□□ -2.23
NPTX2P47972 RNU4-38P-201ENST00000364472 129 ntBASIC1.11□□□□□ -2.23
NPTX2P47972 MIR938-201ENST00000401216 83 ntBASIC1.11□□□□□ -2.23
NPTX2P47972 Y_RNA.676-201ENST00000516393 96 ntBASIC1.11□□□□□ -2.23
NPTX2P47972 MIR548Z-201ENST00000584743 97 ntBASIC1.11□□□□□ -2.23
NPTX2P47972 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.11□□□□□ -2.23
NPTX2P47972 Y_RNA.95-201ENST00000363079 95 ntBASIC1.1□□□□□ -2.23
NPTX2P47972 Y_RNA.107-201ENST00000363190 121 ntBASIC1.1□□□□□ -2.23
NPTX2P47972 Y_RNA.348-201ENST00000365403 103 ntBASIC1.1□□□□□ -2.23
NPTX2P47972 Y_RNA.466-201ENST00000384294 113 ntBASIC1.1□□□□□ -2.23
NPTX2P47972 RNU6-364P-201ENST00000384387 107 ntBASIC1.1□□□□□ -2.23
NPTX2P47972 MIR1276-201ENST00000408707 83 ntBASIC1.1□□□□□ -2.23
NPTX2P47972 SPINT5P-201ENST00000448174 155 ntBASIC1.1□□□□□ -2.23
NPTX2P47972 Y_RNA.677-201ENST00000516401 85 ntBASIC1.1□□□□□ -2.23
NPTX2P47972 MTND5P40-201ENST00000559945 246 ntBASIC1.1□□□□□ -2.23
NPTX2P47972 SNORD92-201ENST00000585078 85 ntBASIC1.1□□□□□ -2.23
NPTX2P47972 RNU6-90P-201ENST00000606352 106 ntBASIC1.1□□□□□ -2.23
NPTX2P47972 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
NPTX2P47972 Y_RNA.93-201ENST00000363066 109 ntBASIC1.09□□□□□ -2.23
NPTX2P47972 RNU6-1163P-201ENST00000364516 107 ntBASIC1.09□□□□□ -2.23
NPTX2P47972 AC004941.2-201ENST00000427009 228 ntBASIC1.09□□□□□ -2.23
NPTX2P47972 FABP5P4-201ENST00000437203 171 ntBASIC1.09□□□□□ -2.23
NPTX2P47972 AC109327.2-201ENST00000448339 378 ntBASIC1.09□□□□□ -2.23
NPTX2P47972 SNRPGP12-201ENST00000449481 213 ntBASIC1.09□□□□□ -2.23
NPTX2P47972 RNU7-56P-201ENST00000458744 62 ntBASIC1.09□□□□□ -2.23
NPTX2P47972 RNU7-102P-201ENST00000458948 62 ntBASIC1.09□□□□□ -2.23
NPTX2P47972 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.09□□□□□ -2.23
NPTX2P47972 RNU6-765P-201ENST00000516916 99 ntBASIC1.09□□□□□ -2.23
NPTX2P47972 RNU6-158P-201ENST00000517104 100 ntBASIC1.09□□□□□ -2.23
NPTX2P47972 MIR4777-201ENST00000583710 86 ntBASIC1.09□□□□□ -2.23
NPTX2P47972 AC013244.2-201ENST00000603396 103 ntBASIC1.09□□□□□ -2.23
NPTX2P47972 MIR6767-201ENST00000637302 66 ntBASIC1.09□□□□□ -2.23
NPTX2P47972 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.24
NPTX2P47972 Y_RNA.173-201ENST00000363776 113 ntBASIC1.08□□□□□ -2.24
NPTX2P47972 MIR520F-201ENST00000384824 87 ntBASIC1.08□□□□□ -2.24
NPTX2P47972 SNORD89-201ENST00000390981 114 ntBASIC1.08□□□□□ -2.24
NPTX2P47972 MIR942-201ENST00000401111 86 ntBASIC1.08□□□□□ -2.24
NPTX2P47972 BX276092.1-201ENST00000427368 251 ntBASIC1.08□□□□□ -2.24
NPTX2P47972 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.08□□□□□ -2.24
NPTX2P47972 RNU6-1194P-201ENST00000516208 104 ntBASIC1.08□□□□□ -2.24
NPTX2P47972 RNU6-1110P-201ENST00000516462 101 ntBASIC1.08□□□□□ -2.24
NPTX2P47972 AC008608.1-201ENST00000603910 127 ntBASIC1.08□□□□□ -2.24
NPTX2P47972 RMST_2.1-201ENST00000617263 136 ntBASIC1.08□□□□□ -2.24
NPTX2P47972 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
NPTX2P47972 RNU6-640P-201ENST00000363693 105 ntBASIC1.07□□□□□ -2.24
NPTX2P47972 Y_RNA.467-201ENST00000384297 102 ntBASIC1.07□□□□□ -2.24
NPTX2P47972 RNU6-905P-201ENST00000384434 107 ntBASIC1.07□□□□□ -2.24
NPTX2P47972 MTATP8P2-201ENST00000435212 202 ntBASIC1.07□□□□□ -2.24
NPTX2P47972 SNORA40.13-201ENST00000516379 120 ntBASIC1.07□□□□□ -2.24
NPTX2P47972 MIR4439-201ENST00000583746 80 ntBASIC1.07□□□□□ -2.24
NPTX2P47972 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.07□□□□□ -2.24
NPTX2P47972 RNU6-571P-201ENST00000384128 107 ntBASIC1.06□□□□□ -2.24
NPTX2P47972 Y_RNA.567-201ENST00000384736 106 ntBASIC1.06□□□□□ -2.24
NPTX2P47972 RNU1-119P-201ENST00000391122 165 ntBASIC1.06□□□□□ -2.24
NPTX2P47972 U7.7-201ENST00000459276 60 ntBASIC1.06□□□□□ -2.24
NPTX2P47972 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.06□□□□□ -2.24
NPTX2P47972 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
NPTX2P47972 RNU1-93P-201ENST00000364704 169 ntBASIC1.05□□□□□ -2.24
NPTX2P47972 RNU7-61P-201ENST00000515897 61 ntBASIC1.05□□□□□ -2.24
NPTX2P47972 RNU6-850P-201ENST00000516934 103 ntBASIC1.05□□□□□ -2.24
NPTX2P47972 RNU6-86P-201ENST00000606534 107 ntBASIC1.05□□□□□ -2.24
NPTX2P47972 AL136317.1-201ENST00000612653 226 ntBASIC1.05□□□□□ -2.24
NPTX2P47972 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
NPTX2P47972 RNU6-1244P-201ENST00000363614 108 ntBASIC1.04□□□□□ -2.24
NPTX2P47972 RNU6-644P-201ENST00000391155 98 ntBASIC1.04□□□□□ -2.24
NPTX2P47972 SNORD100-201ENST00000408573 76 ntBASIC1.04□□□□□ -2.24
NPTX2P47972 Y_RNA.697-201ENST00000516776 113 ntBASIC1.04□□□□□ -2.24
NPTX2P47972 MIR101-2-201ENST00000362195 79 ntBASIC1.03□□□□□ -2.24
NPTX2P47972 RNU6-1335P-201ENST00000365426 107 ntBASIC1.03□□□□□ -2.24
NPTX2P47972 RNU6-813P-201ENST00000384691 107 ntBASIC1.03□□□□□ -2.24
NPTX2P47972 MIR520H-201ENST00000385126 88 ntBASIC1.03□□□□□ -2.24
NPTX2P47972 SNORD105-201ENST00000386910 85 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 172.3 ms