Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 MIR4714-201ENST00000580728 77 ntBASIC0.63□□□□□ -2.31
PTPN9P43378 MIR3910-1-201ENST00000580936 111 ntBASIC0.63□□□□□ -2.31
PTPN9P43378 MIR376B-201ENST00000614515 100 ntBASIC0.63□□□□□ -2.31
PTPN9P43378 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.63□□□□□ -2.31
PTPN9P43378 MIR1255B1-201ENST00000636325 63 ntBASIC0.63□□□□□ -2.31
PTPN9P43378 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
PTPN9P43378 Y_RNA.32-201ENST00000362589 110 ntBASIC0.62□□□□□ -2.31
PTPN9P43378 RNU4-67P-201ENST00000364569 141 ntBASIC0.62□□□□□ -2.31
PTPN9P43378 Y_RNA.344-201ENST00000365381 112 ntBASIC0.62□□□□□ -2.31
PTPN9P43378 SNORA36.2-201ENST00000384004 127 ntBASIC0.62□□□□□ -2.31
PTPN9P43378 MIR548I2-201ENST00000408348 149 ntBASIC0.62□□□□□ -2.31
PTPN9P43378 MIR1912-201ENST00000410389 80 ntBASIC0.62□□□□□ -2.31
PTPN9P43378 SNORA31.14-201ENST00000516728 116 ntBASIC0.62□□□□□ -2.31
PTPN9P43378 AC018659.1-201ENST00000551083 169 ntBASIC0.62□□□□□ -2.31
PTPN9P43378 MIR3678-201ENST00000578455 94 ntBASIC0.62□□□□□ -2.31
PTPN9P43378 AC132825.6-201ENST00000638861 357 ntBASIC0.62□□□□□ -2.31
PTPN9P43378 RNU6-1313P-201ENST00000362622 102 ntBASIC0.61□□□□□ -2.31
PTPN9P43378 Y_RNA.85-201ENST00000363014 111 ntBASIC0.61□□□□□ -2.31
PTPN9P43378 Y_RNA.362-201ENST00000365518 110 ntBASIC0.61□□□□□ -2.31
PTPN9P43378 Y_RNA.507-201ENST00000384500 99 ntBASIC0.61□□□□□ -2.31
PTPN9P43378 Y_RNA.649-201ENST00000459077 103 ntBASIC0.61□□□□□ -2.31
PTPN9P43378 AL162726.3-218ENST00000636401 95 ntBASIC0.61□□□□□ -2.31
PTPN9P43378 SNORD113-1-201ENST00000365321 69 ntBASIC0.6□□□□□ -2.31
PTPN9P43378 Y_RNA.360-201ENST00000365512 102 ntBASIC0.6□□□□□ -2.31
PTPN9P43378 SNORD38.2-201ENST00000384470 69 ntBASIC0.6□□□□□ -2.31
PTPN9P43378 Y_RNA.525-201ENST00000384570 113 ntBASIC0.6□□□□□ -2.31
PTPN9P43378 RNU6-1333P-201ENST00000516162 93 ntBASIC0.6□□□□□ -2.31
PTPN9P43378 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.6□□□□□ -2.31
PTPN9P43378 Y_RNA.353-201ENST00000365440 108 ntBASIC0.59□□□□□ -2.31
PTPN9P43378 RNY1P8-201ENST00000383970 114 ntBASIC0.59□□□□□ -2.31
PTPN9P43378 RNU6-571P-201ENST00000384128 107 ntBASIC0.59□□□□□ -2.31
PTPN9P43378 RNU6-1117P-201ENST00000384525 104 ntBASIC0.59□□□□□ -2.31
PTPN9P43378 MIR92A1-201ENST00000385233 78 ntBASIC0.59□□□□□ -2.31
PTPN9P43378 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.59□□□□□ -2.31
PTPN9P43378 SNORD33.1-201ENST00000516213 88 ntBASIC0.59□□□□□ -2.31
PTPN9P43378 RN7SKP12-201ENST00000516275 143 ntBASIC0.59□□□□□ -2.31
PTPN9P43378 RNA5SP94-201ENST00000516917 108 ntBASIC0.59□□□□□ -2.31
PTPN9P43378 AC007012.1-201ENST00000567192 175 ntBASIC0.59□□□□□ -2.31
PTPN9P43378 AC138869.1-201ENST00000568623 124 ntBASIC0.59□□□□□ -2.31
PTPN9P43378 MIR4500-201ENST00000579472 76 ntBASIC0.59□□□□□ -2.31
PTPN9P43378 MIR4639-201ENST00000584938 69 ntBASIC0.59□□□□□ -2.31
PTPN9P43378 AL670379.3-201ENST00000605040 251 ntBASIC0.59□□□□□ -2.31
PTPN9P43378 Y_RNA.309-201ENST00000365046 111 ntBASIC0.58□□□□□ -2.32
PTPN9P43378 RNU6-409P-201ENST00000384114 104 ntBASIC0.58□□□□□ -2.32
PTPN9P43378 MIR34C-201ENST00000384831 77 ntBASIC0.58□□□□□ -2.32
PTPN9P43378 MIR548A3-201ENST00000385297 97 ntBASIC0.58□□□□□ -2.32
PTPN9P43378 AC244505.6-201ENST00000452829 130 ntBASIC0.58□□□□□ -2.32
PTPN9P43378 RNA5SP121-201ENST00000516537 101 ntBASIC0.58□□□□□ -2.32
PTPN9P43378 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.58□□□□□ -2.32
PTPN9P43378 Y_RNA.118-201ENST00000363300 101 ntBASIC0.57□□□□□ -2.32
PTPN9P43378 SNORD18A-201ENST00000363753 72 ntBASIC0.57□□□□□ -2.32
PTPN9P43378 MIR519A1-201ENST00000385257 85 ntBASIC0.57□□□□□ -2.32
PTPN9P43378 RNU6-816P-201ENST00000390914 107 ntBASIC0.57□□□□□ -2.32
PTPN9P43378 RNU6-1268P-201ENST00000391214 107 ntBASIC0.57□□□□□ -2.32
PTPN9P43378 RNU6-1239P-201ENST00000391310 107 ntBASIC0.57□□□□□ -2.32
PTPN9P43378 SNRPGP12-201ENST00000449481 213 ntBASIC0.57□□□□□ -2.32
PTPN9P43378 RNU6-62P-201ENST00000516526 102 ntBASIC0.57□□□□□ -2.32
PTPN9P43378 AC022709.1-201ENST00000615967 87 ntBASIC0.57□□□□□ -2.32
PTPN9P43378 uc_338.17-201ENST00000619633 179 ntBASIC0.57□□□□□ -2.32
PTPN9P43378 MIR635-201ENST00000384830 98 ntBASIC0.56□□□□□ -2.32
PTPN9P43378 RNU6-679P-201ENST00000391003 106 ntBASIC0.56□□□□□ -2.32
PTPN9P43378 RNU4-54P-201ENST00000516428 129 ntBASIC0.56□□□□□ -2.32
PTPN9P43378 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.56□□□□□ -2.32
PTPN9P43378 AC092634.7-201ENST00000621022 103 ntBASIC0.56□□□□□ -2.32
PTPN9P43378 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.56□□□□□ -2.32
PTPN9P43378 RNA5SP347-201ENST00000362445 119 ntBASIC0.55□□□□□ -2.32
PTPN9P43378 Y_RNA.155-201ENST00000363632 101 ntBASIC0.55□□□□□ -2.32
PTPN9P43378 SNORD38.1-201ENST00000363863 68 ntBASIC0.55□□□□□ -2.32
PTPN9P43378 RNA5SP499-201ENST00000363982 119 ntBASIC0.55□□□□□ -2.32
PTPN9P43378 RNU6-1229P-201ENST00000364295 107 ntBASIC0.55□□□□□ -2.32
PTPN9P43378 RNU6-945P-201ENST00000383947 107 ntBASIC0.55□□□□□ -2.32
PTPN9P43378 RNU6-22P-201ENST00000384355 107 ntBASIC0.55□□□□□ -2.32
PTPN9P43378 SNORD28-201ENST00000384706 75 ntBASIC0.55□□□□□ -2.32
PTPN9P43378 MIR644A-201ENST00000385262 94 ntBASIC0.55□□□□□ -2.32
PTPN9P43378 SNORA7.5-201ENST00000410672 110 ntBASIC0.55□□□□□ -2.32
PTPN9P43378 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.55□□□□□ -2.32
PTPN9P43378 AC092628.1-201ENST00000436250 252 ntBASIC0.55□□□□□ -2.32
PTPN9P43378 RNU6-479P-201ENST00000516348 105 ntBASIC0.55□□□□□ -2.32
PTPN9P43378 RNU6-1006P-201ENST00000516998 103 ntBASIC0.55□□□□□ -2.32
PTPN9P43378 RNU6-789P-201ENST00000517105 102 ntBASIC0.55□□□□□ -2.32
PTPN9P43378 MIR6828-201ENST00000636181 60 ntBASIC0.55□□□□□ -2.32
PTPN9P43378 RNU6-834P-201ENST00000362367 110 ntBASIC0.54□□□□□ -2.32
PTPN9P43378 RNU6-170P-201ENST00000362832 104 ntBASIC0.54□□□□□ -2.32
PTPN9P43378 Y_RNA.377-201ENST00000365644 108 ntBASIC0.54□□□□□ -2.32
PTPN9P43378 RNU6-1168P-201ENST00000390831 104 ntBASIC0.54□□□□□ -2.32
PTPN9P43378 AL353813.1-201ENST00000440700 253 ntBASIC0.54□□□□□ -2.32
PTPN9P43378 AC097635.1-201ENST00000450678 155 ntBASIC0.54□□□□□ -2.32
PTPN9P43378 AL157398.1-201ENST00000452981 186 ntBASIC0.54□□□□□ -2.32
PTPN9P43378 SCARNA16.5-201ENST00000517114 183 ntBASIC0.54□□□□□ -2.32
PTPN9P43378 RNA5SP47-201ENST00000517230 109 ntBASIC0.54□□□□□ -2.32
PTPN9P43378 AL035470.1-201ENST00000622571 220 ntBASIC0.54□□□□□ -2.32
PTPN9P43378 AL512310.12-203ENST00000640543 90 ntBASIC0.54□□□□□ -2.32
PTPN9P43378 SNORA63.5-201ENST00000363548 123 ntBASIC0.53□□□□□ -2.32
PTPN9P43378 RNA5SP245-201ENST00000364239 121 ntBASIC0.53□□□□□ -2.32
PTPN9P43378 RNA5SP205-201ENST00000364653 136 ntBASIC0.53□□□□□ -2.32
PTPN9P43378 Y_RNA.281-201ENST00000364774 94 ntBASIC0.53□□□□□ -2.32
PTPN9P43378 RNU6-1201P-201ENST00000384227 107 ntBASIC0.53□□□□□ -2.32
PTPN9P43378 RNU6-880P-201ENST00000384526 107 ntBASIC0.53□□□□□ -2.32
PTPN9P43378 Y_RNA.567-201ENST00000384736 106 ntBASIC0.53□□□□□ -2.32
PTPN9P43378 MIR6515-201ENST00000619843 57 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 175.1 ms