Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 Y_RNA.322-201ENST00000365151 102 ntBASIC-0.6□□□□□ -2.51
COL18A1P39060 SNORA32-201ENST00000384072 121 ntBASIC-0.6□□□□□ -2.51
COL18A1P39060 RBMX2P4-201ENST00000441256 376 ntBASIC-0.6□□□□□ -2.51
COL18A1P39060 SNORD2.1-201ENST00000458762 69 ntBASIC-0.6□□□□□ -2.51
COL18A1P39060 Y_RNA.650-201ENST00000459002 102 ntBASIC-0.6□□□□□ -2.51
COL18A1P39060 Y_RNA.777-201ENST00000516982 102 ntBASIC-0.6□□□□□ -2.51
COL18A1P39060 Y_RNA.771-201ENST00000598668 102 ntBASIC-0.6□□□□□ -2.51
COL18A1P39060 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-0.6□□□□□ -2.51
COL18A1P39060 Y_RNA.789-201ENST00000622480 102 ntBASIC-0.6□□□□□ -2.51
COL18A1P39060 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.6□□□□□ -2.51
COL18A1P39060 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.61□□□□□ -2.51
COL18A1P39060 RNU1-141P-201ENST00000364623 158 ntBASIC-0.61□□□□□ -2.51
COL18A1P39060 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.61□□□□□ -2.51
COL18A1P39060 Y_RNA.431-201ENST00000384086 102 ntBASIC-0.61□□□□□ -2.51
COL18A1P39060 RNU6-1009P-201ENST00000390996 107 ntBASIC-0.61□□□□□ -2.51
COL18A1P39060 RNU6-381P-201ENST00000391259 108 ntBASIC-0.61□□□□□ -2.51
COL18A1P39060 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.61□□□□□ -2.51
COL18A1P39060 Y_RNA.679-201ENST00000516416 91 ntBASIC-0.61□□□□□ -2.51
COL18A1P39060 RNU6-988P-201ENST00000519081 107 ntBASIC-0.61□□□□□ -2.51
COL18A1P39060 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.61□□□□□ -2.51
COL18A1P39060 MIR369-201ENST00000362155 70 ntBASIC-0.62□□□□□ -2.51
COL18A1P39060 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.62□□□□□ -2.51
COL18A1P39060 U8.6-201ENST00000364939 135 ntBASIC-0.62□□□□□ -2.51
COL18A1P39060 AC244250.2-201ENST00000418731 148 ntBASIC-0.62□□□□□ -2.51
COL18A1P39060 RNU7-13P-201ENST00000516413 62 ntBASIC-0.62□□□□□ -2.51
COL18A1P39060 Y_RNA.326-201ENST00000365176 113 ntBASIC-0.62□□□□□ -2.51
COL18A1P39060 SNORD42.2-201ENST00000365570 69 ntBASIC-0.62□□□□□ -2.51
COL18A1P39060 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.62□□□□□ -2.51
COL18A1P39060 Y_RNA.590-201ENST00000410140 107 ntBASIC-0.62□□□□□ -2.51
COL18A1P39060 MTND3P22-201ENST00000510932 243 ntBASIC-0.62□□□□□ -2.51
COL18A1P39060 RN7SKP19-201ENST00000516016 252 ntBASIC-0.62□□□□□ -2.51
COL18A1P39060 AL359881.1-201ENST00000602916 267 ntBASIC-0.62□□□□□ -2.51
COL18A1P39060 Y_RNA.210-201ENST00000364161 110 ntBASIC-0.63□□□□□ -2.51
COL18A1P39060 SNORD114-29-201ENST00000364819 70 ntBASIC-0.63□□□□□ -2.51
COL18A1P39060 Y_RNA.403-201ENST00000383977 101 ntBASIC-0.63□□□□□ -2.51
COL18A1P39060 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.63□□□□□ -2.51
COL18A1P39060 RNU7-48P-201ENST00000458875 63 ntBASIC-0.63□□□□□ -2.51
COL18A1P39060 AC069503.3-201ENST00000618674 145 ntBASIC-0.63□□□□□ -2.51
COL18A1P39060 Y_RNA.26-201ENST00000362539 101 ntBASIC-0.64□□□□□ -2.51
COL18A1P39060 RNU6-978P-201ENST00000364371 103 ntBASIC-0.64□□□□□ -2.51
COL18A1P39060 MIR4282-201ENST00000583613 67 ntBASIC-0.64□□□□□ -2.51
COL18A1P39060 MIR4795-201ENST00000584182 89 ntBASIC-0.64□□□□□ -2.51
COL18A1P39060 AL590491.3-201ENST00000610731 82 ntBASIC-0.64□□□□□ -2.51
COL18A1P39060 AC011603.4-201ENST00000611325 277 ntBASIC-0.64□□□□□ -2.51
COL18A1P39060 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.65□□□□□ -2.51
COL18A1P39060 SNORA25.7-201ENST00000364375 127 ntBASIC-0.65□□□□□ -2.51
COL18A1P39060 Y_RNA.262-201ENST00000364641 102 ntBASIC-0.65□□□□□ -2.51
COL18A1P39060 Y_RNA.455-201ENST00000384230 98 ntBASIC-0.65□□□□□ -2.51
COL18A1P39060 MIR519A1-201ENST00000385257 85 ntBASIC-0.65□□□□□ -2.51
COL18A1P39060 RNU6-651P-201ENST00000411040 105 ntBASIC-0.65□□□□□ -2.51
COL18A1P39060 MTND5P20-201ENST00000448677 143 ntBASIC-0.65□□□□□ -2.51
COL18A1P39060 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.65□□□□□ -2.51
COL18A1P39060 RNU7-188P-201ENST00000517063 64 ntBASIC-0.65□□□□□ -2.51
COL18A1P39060 MIR548AE2-201ENST00000583456 67 ntBASIC-0.65□□□□□ -2.51
COL18A1P39060 RNU4-17P-201ENST00000365598 141 ntBASIC-0.65□□□□□ -2.51
COL18A1P39060 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.65□□□□□ -2.51
COL18A1P39060 MIR1246-201ENST00000636535 73 ntBASIC-0.65□□□□□ -2.51
COL18A1P39060 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.66□□□□□ -2.52
COL18A1P39060 RNU6-690P-201ENST00000365242 106 ntBASIC-0.66□□□□□ -2.52
COL18A1P39060 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.66□□□□□ -2.52
COL18A1P39060 MIR617-201ENST00000385030 97 ntBASIC-0.66□□□□□ -2.52
COL18A1P39060 RNU6-578P-201ENST00000390980 103 ntBASIC-0.66□□□□□ -2.52
COL18A1P39060 RNU4-69P-201ENST00000410677 143 ntBASIC-0.66□□□□□ -2.52
COL18A1P39060 MTND5P40-201ENST00000559945 246 ntBASIC-0.66□□□□□ -2.52
COL18A1P39060 YWHAEP2-201ENST00000580066 112 ntBASIC-0.66□□□□□ -2.52
COL18A1P39060 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.67□□□□□ -2.52
COL18A1P39060 SNORD114-11-201ENST00000363738 75 ntBASIC-0.67□□□□□ -2.52
COL18A1P39060 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.67□□□□□ -2.52
COL18A1P39060 RNU6-480P-201ENST00000384332 107 ntBASIC-0.67□□□□□ -2.52
COL18A1P39060 RNA5SP66-201ENST00000517178 101 ntBASIC-0.67□□□□□ -2.52
COL18A1P39060 AL442663.2-201ENST00000554385 511 ntBASIC-0.67□□□□□ -2.52
COL18A1P39060 MIR335-201ENST00000362173 94 ntBASIC-0.68□□□□□ -2.52
COL18A1P39060 Y_RNA.158-201ENST00000363651 101 ntBASIC-0.68□□□□□ -2.52
COL18A1P39060 Y_RNA.505-201ENST00000384489 102 ntBASIC-0.68□□□□□ -2.52
COL18A1P39060 MT-TD-201ENST00000387419 68 ntBASIC-0.68□□□□□ -2.52
COL18A1P39060 SNORD63B-201ENST00000411005 70 ntBASIC-0.68□□□□□ -2.52
COL18A1P39060 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-0.68□□□□□ -2.52
COL18A1P39060 RNU7-195P-201ENST00000458793 62 ntBASIC-0.68□□□□□ -2.52
COL18A1P39060 MIR4432-201ENST00000581823 84 ntBASIC-0.68□□□□□ -2.52
COL18A1P39060 Y_RNA.128-201ENST00000363391 112 ntBASIC-0.68□□□□□ -2.52
COL18A1P39060 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.68□□□□□ -2.52
COL18A1P39060 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.68□□□□□ -2.52
COL18A1P39060 AC113195.1-201ENST00000579952 141 ntBASIC-0.68□□□□□ -2.52
COL18A1P39060 SNORD114-14-201ENST00000362723 75 ntBASIC-0.69□□□□□ -2.52
COL18A1P39060 RNU6-524P-201ENST00000384270 107 ntBASIC-0.69□□□□□ -2.52
COL18A1P39060 MIR206-201ENST00000384872 86 ntBASIC-0.69□□□□□ -2.52
COL18A1P39060 MTND5P22-201ENST00000458380 195 ntBASIC-0.69□□□□□ -2.52
COL18A1P39060 RNU2-35P-201ENST00000516446 142 ntBASIC-0.69□□□□□ -2.52
COL18A1P39060 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.69□□□□□ -2.52
COL18A1P39060 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.69□□□□□ -2.52
COL18A1P39060 AP001362.1-201ENST00000625165 124 ntBASIC-0.69□□□□□ -2.52
COL18A1P39060 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.7□□□□□ -2.52
COL18A1P39060 SNORD115-44-201ENST00000365391 82 ntBASIC-0.7□□□□□ -2.52
COL18A1P39060 RNU6-1109P-201ENST00000391187 107 ntBASIC-0.7□□□□□ -2.52
COL18A1P39060 AL603914.1-201ENST00000401964 204 ntBASIC-0.7□□□□□ -2.52
COL18A1P39060 AC093423.1-201ENST00000440817 142 ntBASIC-0.7□□□□□ -2.52
COL18A1P39060 RNU6-732P-201ENST00000516033 103 ntBASIC-0.7□□□□□ -2.52
COL18A1P39060 RNU6-287P-201ENST00000516230 98 ntBASIC-0.7□□□□□ -2.52
COL18A1P39060 MIR4473-201ENST00000583731 91 ntBASIC-0.7□□□□□ -2.52
COL18A1P39060 AC009779.6-201ENST00000603972 165 ntBASIC-0.7□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 254.5 ms