Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 RNU6-735P-201ENST00000410612 107 ntBASIC-0.64□□□□□ -2.51
USF1P22415 RNU6-138P-201ENST00000515952 107 ntBASIC-0.64□□□□□ -2.51
USF1P22415 Y_RNA.797-201ENST00000515977 94 ntBASIC-0.64□□□□□ -2.51
USF1P22415 RNA5SP236-201ENST00000516169 116 ntBASIC-0.64□□□□□ -2.51
USF1P22415 RNU2-35P-201ENST00000516446 142 ntBASIC-0.64□□□□□ -2.51
USF1P22415 RNU6-175P-201ENST00000516896 107 ntBASIC-0.64□□□□□ -2.51
USF1P22415 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.64□□□□□ -2.51
USF1P22415 MIR548AG2-201ENST00000581228 64 ntBASIC-0.64□□□□□ -2.51
USF1P22415 MIR4801-201ENST00000582704 82 ntBASIC-0.64□□□□□ -2.51
USF1P22415 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.65□□□□□ -2.51
USF1P22415 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.65□□□□□ -2.51
USF1P22415 MIR181B2-201ENST00000385004 89 ntBASIC-0.65□□□□□ -2.51
USF1P22415 RNU4-69P-201ENST00000410677 143 ntBASIC-0.65□□□□□ -2.51
USF1P22415 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.65□□□□□ -2.51
USF1P22415 RNA5SP169-201ENST00000517268 117 ntBASIC-0.65□□□□□ -2.51
USF1P22415 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.65□□□□□ -2.51
USF1P22415 AC069503.3-201ENST00000618674 145 ntBASIC-0.65□□□□□ -2.51
USF1P22415 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.65□□□□□ -2.51
USF1P22415 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.66□□□□□ -2.52
USF1P22415 MIR519E-201ENST00000385075 84 ntBASIC-0.66□□□□□ -2.52
USF1P22415 RNU6-1109P-201ENST00000391187 107 ntBASIC-0.66□□□□□ -2.52
USF1P22415 RNU6-985P-201ENST00000410182 104 ntBASIC-0.66□□□□□ -2.52
USF1P22415 RNU7-195P-201ENST00000458793 62 ntBASIC-0.66□□□□□ -2.52
USF1P22415 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.66□□□□□ -2.52
USF1P22415 MIR548AX-201ENST00000580117 73 ntBASIC-0.66□□□□□ -2.52
USF1P22415 MIR548AE1-201ENST00000583292 70 ntBASIC-0.66□□□□□ -2.52
USF1P22415 U6.104-201ENST00000637979 90 ntBASIC-0.66□□□□□ -2.52
USF1P22415 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.67□□□□□ -2.52
USF1P22415 MIR539-201ENST00000365690 78 ntBASIC-0.67□□□□□ -2.52
USF1P22415 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.67□□□□□ -2.52
USF1P22415 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.67□□□□□ -2.52
USF1P22415 MIR206-201ENST00000384872 86 ntBASIC-0.67□□□□□ -2.52
USF1P22415 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.67□□□□□ -2.52
USF1P22415 SNORA3B-201ENST00000391305 131 ntBASIC-0.67□□□□□ -2.52
USF1P22415 SNORD63B-201ENST00000411005 70 ntBASIC-0.67□□□□□ -2.52
USF1P22415 RNU6-1137P-201ENST00000517073 99 ntBASIC-0.67□□□□□ -2.52
USF1P22415 RNA5SP66-201ENST00000517178 101 ntBASIC-0.67□□□□□ -2.52
USF1P22415 AP001328.1-201ENST00000528550 176 ntBASIC-0.67□□□□□ -2.52
USF1P22415 RNU2-4P-201ENST00000606190 192 ntBASIC-0.67□□□□□ -2.52
USF1P22415 AP001362.1-201ENST00000625165 124 ntBASIC-0.67□□□□□ -2.52
USF1P22415 MIR409-201ENST00000362237 79 ntBASIC-0.68□□□□□ -2.52
USF1P22415 SNORD114-14-201ENST00000362723 75 ntBASIC-0.68□□□□□ -2.52
USF1P22415 Y_RNA.292-201ENST00000364904 97 ntBASIC-0.68□□□□□ -2.52
USF1P22415 RNU6-524P-201ENST00000384270 107 ntBASIC-0.68□□□□□ -2.52
USF1P22415 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.68□□□□□ -2.52
USF1P22415 IGKV1-22-201ENST00000524313 326 ntBASIC-0.68□□□□□ -2.52
USF1P22415 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.68□□□□□ -2.52
USF1P22415 YWHAEP2-201ENST00000580066 112 ntBASIC-0.68□□□□□ -2.52
USF1P22415 MIR3171-201ENST00000584270 74 ntBASIC-0.68□□□□□ -2.52
USF1P22415 uc_338.10-201ENST00000621872 182 ntBASIC-0.68□□□□□ -2.52
USF1P22415 RNU6-170P-201ENST00000362832 104 ntBASIC-0.69□□□□□ -2.52
USF1P22415 Y_RNA.138-201ENST00000363462 102 ntBASIC-0.69□□□□□ -2.52
USF1P22415 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.69□□□□□ -2.52
USF1P22415 Y_RNA.216-201ENST00000364205 93 ntBASIC-0.69□□□□□ -2.52
USF1P22415 Y_RNA.308-201ENST00000365043 101 ntBASIC-0.69□□□□□ -2.52
USF1P22415 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.69□□□□□ -2.52
USF1P22415 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.69□□□□□ -2.52
USF1P22415 RNU6-455P-201ENST00000384681 107 ntBASIC-0.69□□□□□ -2.52
USF1P22415 MIR9-2-201ENST00000384838 87 ntBASIC-0.69□□□□□ -2.52
USF1P22415 MT-TQ-201ENST00000387372 72 ntBASIC-0.69□□□□□ -2.52
USF1P22415 SNORD77B-201ENST00000391112 67 ntBASIC-0.69□□□□□ -2.52
USF1P22415 AC138907.4-201ENST00000570107 226 ntBASIC-0.69□□□□□ -2.52
USF1P22415 MIR4643-201ENST00000577473 78 ntBASIC-0.69□□□□□ -2.52
USF1P22415 AC021443.1-201ENST00000604478 211 ntBASIC-0.69□□□□□ -2.52
USF1P22415 Y_RNA.202-201ENST00000364083 110 ntBASIC-0.7□□□□□ -2.52
USF1P22415 SNORD114-29-201ENST00000364819 70 ntBASIC-0.7□□□□□ -2.52
USF1P22415 Y_RNA.352-201ENST00000365439 102 ntBASIC-0.7□□□□□ -2.52
USF1P22415 MIR617-201ENST00000385030 97 ntBASIC-0.7□□□□□ -2.52
USF1P22415 MIR1302-6-201ENST00000408466 90 ntBASIC-0.7□□□□□ -2.52
USF1P22415 RNU7-164P-201ENST00000459221 62 ntBASIC-0.7□□□□□ -2.52
USF1P22415 RNU7-106P-201ENST00000459514 67 ntBASIC-0.7□□□□□ -2.52
USF1P22415 RNU6-240P-201ENST00000516098 97 ntBASIC-0.7□□□□□ -2.52
USF1P22415 Y_RNA.76-201ENST00000362931 109 ntBASIC-0.71□□□□□ -2.52
USF1P22415 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.71□□□□□ -2.52
USF1P22415 MTATP6P21-201ENST00000440681 189 ntBASIC-0.71□□□□□ -2.52
USF1P22415 SNORD57-201ENST00000448188 72 ntBASIC-0.71□□□□□ -2.52
USF1P22415 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.71□□□□□ -2.52
USF1P22415 MTND1P19-201ENST00000511780 315 ntBASIC-0.71□□□□□ -2.52
USF1P22415 RNY3P16-201ENST00000516338 101 ntBASIC-0.71□□□□□ -2.52
USF1P22415 Y_RNA.182-201ENST00000363880 111 ntBASIC-0.72□□□□□ -2.52
USF1P22415 RNU6-275P-201ENST00000364910 107 ntBASIC-0.72□□□□□ -2.52
USF1P22415 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.72□□□□□ -2.52
USF1P22415 RNU6-571P-201ENST00000384128 107 ntBASIC-0.72□□□□□ -2.52
USF1P22415 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.72□□□□□ -2.52
USF1P22415 MTATP6P23-201ENST00000440153 476 ntBASIC-0.72□□□□□ -2.52
USF1P22415 RNU7-2P-201ENST00000516096 62 ntBASIC-0.72□□□□□ -2.52
USF1P22415 AC020661.2-201ENST00000560114 134 ntBASIC-0.72□□□□□ -2.52
USF1P22415 AC093726.3-201ENST00000637588 150 ntBASIC-0.72□□□□□ -2.52
USF1P22415 SNORD115-44-201ENST00000365391 82 ntBASIC-0.73□□□□□ -2.53
USF1P22415 RNU6-47P-201ENST00000383866 107 ntBASIC-0.73□□□□□ -2.53
USF1P22415 RNU6-154P-201ENST00000384306 106 ntBASIC-0.73□□□□□ -2.53
USF1P22415 RNU6-493P-201ENST00000391321 108 ntBASIC-0.73□□□□□ -2.53
USF1P22415 RNU7-123P-201ENST00000515911 60 ntBASIC-0.73□□□□□ -2.53
USF1P22415 MIR8062-201ENST00000621515 85 ntBASIC-0.73□□□□□ -2.53
USF1P22415 Y_RNA.54-201ENST00000362766 105 ntBASIC-0.74□□□□□ -2.53
USF1P22415 Y_RNA.277-201ENST00000364754 102 ntBASIC-0.74□□□□□ -2.53
USF1P22415 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.74□□□□□ -2.53
USF1P22415 Y_RNA.461-201ENST00000384263 103 ntBASIC-0.74□□□□□ -2.53
USF1P22415 RNU6-472P-201ENST00000384299 107 ntBASIC-0.74□□□□□ -2.53
USF1P22415 Y_RNA.483-201ENST00000384380 101 ntBASIC-0.74□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 177.8 ms