Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AC023934.1-201ENST00000574529 2389 ntBASIC0.41□□□□□ -2.34
COL5A1P20908 Y_RNA.127-201ENST00000363386 109 ntBASIC0.41□□□□□ -2.34
COL5A1P20908 Y_RNA.213-201ENST00000364178 111 ntBASIC0.41□□□□□ -2.34
COL5A1P20908 SNORD114-24-201ENST00000365029 72 ntBASIC0.41□□□□□ -2.34
COL5A1P20908 Y_RNA.344-201ENST00000365381 112 ntBASIC0.41□□□□□ -2.34
COL5A1P20908 RNU6-81P-201ENST00000365608 104 ntBASIC0.41□□□□□ -2.34
COL5A1P20908 MIR518A1-201ENST00000385068 85 ntBASIC0.41□□□□□ -2.34
COL5A1P20908 MIR605-201ENST00000385078 83 ntBASIC0.41□□□□□ -2.34
COL5A1P20908 AC244098.3-201ENST00000424803 96 ntBASIC0.41□□□□□ -2.34
COL5A1P20908 RNU6-1061P-201ENST00000516530 99 ntBASIC0.41□□□□□ -2.34
COL5A1P20908 MIR4771-2-201ENST00000577758 74 ntBASIC0.41□□□□□ -2.34
COL5A1P20908 AC090897.1-201ENST00000580909 226 ntBASIC0.41□□□□□ -2.34
COL5A1P20908 MIR4771-1-201ENST00000582617 74 ntBASIC0.41□□□□□ -2.34
COL5A1P20908 AL162726.3-218ENST00000636401 95 ntBASIC0.41□□□□□ -2.34
COL5A1P20908 MIR1-1-201ENST00000362147 71 ntBASIC0.4□□□□□ -2.35
COL5A1P20908 MIR30D-201ENST00000362283 70 ntBASIC0.4□□□□□ -2.35
COL5A1P20908 RNU6-1144P-201ENST00000384247 104 ntBASIC0.4□□□□□ -2.35
COL5A1P20908 RNU6-429P-201ENST00000384582 108 ntBASIC0.4□□□□□ -2.35
COL5A1P20908 RNU6-535P-201ENST00000384722 107 ntBASIC0.4□□□□□ -2.35
COL5A1P20908 MIR1827-201ENST00000408549 66 ntBASIC0.4□□□□□ -2.35
COL5A1P20908 AL606753.1-201ENST00000427435 87 ntBASIC0.4□□□□□ -2.35
COL5A1P20908 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.4□□□□□ -2.35
COL5A1P20908 RNU5E-3P-201ENST00000515913 68 ntBASIC0.4□□□□□ -2.35
COL5A1P20908 RNU6-781P-201ENST00000516377 101 ntBASIC0.4□□□□□ -2.35
COL5A1P20908 MTND5P18-201ENST00000445624 1801 ntBASIC0.4□□□□□ -2.35
COL5A1P20908 RNA5SP133-201ENST00000363368 119 ntBASIC0.39□□□□□ -2.35
COL5A1P20908 RNY4P6-201ENST00000363667 96 ntBASIC0.39□□□□□ -2.35
COL5A1P20908 RNA5SP205-201ENST00000364653 136 ntBASIC0.39□□□□□ -2.35
COL5A1P20908 MIR577-201ENST00000385196 96 ntBASIC0.39□□□□□ -2.35
COL5A1P20908 MIR1263-201ENST00000408324 86 ntBASIC0.39□□□□□ -2.35
COL5A1P20908 RPL39P34-201ENST00000477141 156 ntBASIC0.39□□□□□ -2.35
COL5A1P20908 AC022523.2-201ENST00000561045 150 ntBASIC0.39□□□□□ -2.35
COL5A1P20908 MIR4500-201ENST00000579472 76 ntBASIC0.39□□□□□ -2.35
COL5A1P20908 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
COL5A1P20908 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
COL5A1P20908 RNY4P3-201ENST00000365254 95 ntBASIC0.38□□□□□ -2.35
COL5A1P20908 MIR1257-201ENST00000408490 117 ntBASIC0.38□□□□□ -2.35
COL5A1P20908 RNU7-107P-201ENST00000459121 61 ntBASIC0.38□□□□□ -2.35
COL5A1P20908 RNU6-1333P-201ENST00000516162 93 ntBASIC0.38□□□□□ -2.35
COL5A1P20908 RNU6-1110P-201ENST00000516462 101 ntBASIC0.38□□□□□ -2.35
COL5A1P20908 MIR4679-2-201ENST00000578358 77 ntBASIC0.38□□□□□ -2.35
COL5A1P20908 MIR3163-201ENST00000581592 73 ntBASIC0.38□□□□□ -2.35
COL5A1P20908 Y_RNA.773-201ENST00000607168 90 ntBASIC0.38□□□□□ -2.35
COL5A1P20908 AC105081.1-201ENST00000617727 106 ntBASIC0.38□□□□□ -2.35
COL5A1P20908 RNU6-363P-201ENST00000362895 105 ntBASIC0.38□□□□□ -2.35
COL5A1P20908 Y_RNA.549-201ENST00000384657 102 ntBASIC0.38□□□□□ -2.35
COL5A1P20908 U8.15-201ENST00000390947 134 ntBASIC0.38□□□□□ -2.35
COL5A1P20908 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.38□□□□□ -2.35
COL5A1P20908 AC002429.1-201ENST00000437672 148 ntBASIC0.38□□□□□ -2.35
COL5A1P20908 AC002350.1-201ENST00000490759 375 ntBASIC0.38□□□□□ -2.35
COL5A1P20908 RNU7-2P-201ENST00000516096 62 ntBASIC0.38□□□□□ -2.35
COL5A1P20908 RNU6-412P-201ENST00000516434 106 ntBASIC0.38□□□□□ -2.35
COL5A1P20908 RNU7-156P-201ENST00000517214 74 ntBASIC0.38□□□□□ -2.35
COL5A1P20908 AC141846.1-201ENST00000568348 142 ntBASIC0.38□□□□□ -2.35
COL5A1P20908 RNU6-94P-201ENST00000607728 107 ntBASIC0.38□□□□□ -2.35
COL5A1P20908 MIR1255B1-201ENST00000636325 63 ntBASIC0.38□□□□□ -2.35
COL5A1P20908 Y_RNA.281-201ENST00000364774 94 ntBASIC0.37□□□□□ -2.35
COL5A1P20908 RNU6-1335P-201ENST00000365426 107 ntBASIC0.37□□□□□ -2.35
COL5A1P20908 Y_RNA.362-201ENST00000365518 110 ntBASIC0.37□□□□□ -2.35
COL5A1P20908 SNORD83.1-201ENST00000411362 77 ntBASIC0.37□□□□□ -2.35
COL5A1P20908 TMSB4XP3-201ENST00000445144 114 ntBASIC0.37□□□□□ -2.35
COL5A1P20908 RNU6-659P-201ENST00000516454 104 ntBASIC0.37□□□□□ -2.35
COL5A1P20908 AL442128.1-201ENST00000615151 90 ntBASIC0.37□□□□□ -2.35
COL5A1P20908 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.37□□□□□ -2.35
COL5A1P20908 RNU6-403P-201ENST00000363163 104 ntBASIC0.36□□□□□ -2.35
COL5A1P20908 RNU6-832P-201ENST00000363319 107 ntBASIC0.36□□□□□ -2.35
COL5A1P20908 Y_RNA.309-201ENST00000365046 111 ntBASIC0.36□□□□□ -2.35
COL5A1P20908 Y_RNA.353-201ENST00000365440 108 ntBASIC0.36□□□□□ -2.35
COL5A1P20908 Y_RNA.536-201ENST00000384621 113 ntBASIC0.36□□□□□ -2.35
COL5A1P20908 MIR548A3-201ENST00000385297 97 ntBASIC0.36□□□□□ -2.35
COL5A1P20908 RNU6-1154P-201ENST00000391001 104 ntBASIC0.36□□□□□ -2.35
COL5A1P20908 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.36□□□□□ -2.35
COL5A1P20908 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.36□□□□□ -2.35
COL5A1P20908 snoU13.19-201ENST00000459148 104 ntBASIC0.36□□□□□ -2.35
COL5A1P20908 PDCD5P2-201ENST00000507570 312 ntBASIC0.36□□□□□ -2.35
COL5A1P20908 SNORD33.1-201ENST00000516213 88 ntBASIC0.36□□□□□ -2.35
COL5A1P20908 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.36□□□□□ -2.35
COL5A1P20908 MIR548AE2-201ENST00000583456 67 ntBASIC0.36□□□□□ -2.35
COL5A1P20908 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.36□□□□□ -2.35
COL5A1P20908 MIR376B-201ENST00000614515 100 ntBASIC0.36□□□□□ -2.35
COL5A1P20908 uc_338.17-201ENST00000619633 179 ntBASIC0.36□□□□□ -2.35
COL5A1P20908 U6.109-201ENST00000636749 87 ntBASIC0.36□□□□□ -2.35
COL5A1P20908 AL157777.2-201ENST00000258070 137 ntBASIC0.36□□□□□ -2.35
COL5A1P20908 Y_RNA.35-201ENST00000362601 101 ntBASIC0.36□□□□□ -2.35
COL5A1P20908 SNORD113-1-201ENST00000365321 69 ntBASIC0.36□□□□□ -2.35
COL5A1P20908 SNORD116-14-201ENST00000383894 92 ntBASIC0.36□□□□□ -2.35
COL5A1P20908 SNORD116-17-201ENST00000383929 92 ntBASIC0.36□□□□□ -2.35
COL5A1P20908 SNORD116-15-201ENST00000384445 92 ntBASIC0.36□□□□□ -2.35
COL5A1P20908 SNORD116-19-201ENST00000384729 92 ntBASIC0.36□□□□□ -2.35
COL5A1P20908 MIR635-201ENST00000384830 98 ntBASIC0.36□□□□□ -2.35
COL5A1P20908 MIR573-201ENST00000384964 99 ntBASIC0.36□□□□□ -2.35
COL5A1P20908 SNORD77B-201ENST00000391112 67 ntBASIC0.36□□□□□ -2.35
COL5A1P20908 SNORA31.14-201ENST00000516728 116 ntBASIC0.36□□□□□ -2.35
COL5A1P20908 Y_RNA.697-201ENST00000516776 113 ntBASIC0.36□□□□□ -2.35
COL5A1P20908 AL512310.12-203ENST00000640543 90 ntBASIC0.36□□□□□ -2.35
COL5A1P20908 MIR101-2-201ENST00000362195 79 ntBASIC0.35□□□□□ -2.35
COL5A1P20908 Y_RNA.155-201ENST00000363632 101 ntBASIC0.35□□□□□ -2.35
COL5A1P20908 RNU6-1107P-201ENST00000364817 104 ntBASIC0.35□□□□□ -2.35
COL5A1P20908 RNY1P2-201ENST00000364820 117 ntBASIC0.35□□□□□ -2.35
COL5A1P20908 U8.6-201ENST00000364939 135 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms