Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 RNU6-1018P-201ENST00000516577 106 ntBASIC1.45□□□□□ -2.18
ERCC3P19447 AC025627.3-201ENST00000582078 182 ntBASIC1.45□□□□□ -2.18
ERCC3P19447 SNORD92-201ENST00000585078 85 ntBASIC1.45□□□□□ -2.18
ERCC3P19447 AC008608.1-201ENST00000603910 127 ntBASIC1.45□□□□□ -2.18
ERCC3P19447 AC096720.1-201ENST00000604441 183 ntBASIC1.45□□□□□ -2.18
ERCC3P19447 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.45□□□□□ -2.18
ERCC3P19447 RNU6-1313P-201ENST00000362622 102 ntBASIC1.44□□□□□ -2.18
ERCC3P19447 Y_RNA.163-201ENST00000363702 113 ntBASIC1.44□□□□□ -2.18
ERCC3P19447 RNU6-1335P-201ENST00000365426 107 ntBASIC1.44□□□□□ -2.18
ERCC3P19447 Y_RNA.659-201ENST00000515994 113 ntBASIC1.44□□□□□ -2.18
ERCC3P19447 RNU4-36P-201ENST00000364294 144 ntBASIC1.43□□□□□ -2.18
ERCC3P19447 RNA5SP255-201ENST00000516370 107 ntBASIC1.43□□□□□ -2.18
ERCC3P19447 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.43□□□□□ -2.18
ERCC3P19447 AL442128.1-201ENST00000615151 90 ntBASIC1.43□□□□□ -2.18
ERCC3P19447 MIR8066-201ENST00000617280 78 ntBASIC1.43□□□□□ -2.18
ERCC3P19447 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.43□□□□□ -2.18
ERCC3P19447 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
ERCC3P19447 SNORD114-27-201ENST00000363766 70 ntBASIC1.42□□□□□ -2.18
ERCC3P19447 MIR577-201ENST00000385196 96 ntBASIC1.42□□□□□ -2.18
ERCC3P19447 BX276092.1-201ENST00000427368 251 ntBASIC1.42□□□□□ -2.18
ERCC3P19447 AL353813.1-201ENST00000440700 253 ntBASIC1.42□□□□□ -2.18
ERCC3P19447 MIR4694-201ENST00000578534 80 ntBASIC1.42□□□□□ -2.18
ERCC3P19447 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
ERCC3P19447 RNY3P2-201ENST00000362918 102 ntBASIC1.41□□□□□ -2.18
ERCC3P19447 RNU1-93P-201ENST00000364704 169 ntBASIC1.41□□□□□ -2.18
ERCC3P19447 SNORA51.5-201ENST00000384126 131 ntBASIC1.41□□□□□ -2.18
ERCC3P19447 RNU6-1201P-201ENST00000384227 107 ntBASIC1.41□□□□□ -2.18
ERCC3P19447 MIR758-201ENST00000390227 88 ntBASIC1.41□□□□□ -2.18
ERCC3P19447 SNORD99-201ENST00000408612 74 ntBASIC1.41□□□□□ -2.18
ERCC3P19447 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.41□□□□□ -2.18
ERCC3P19447 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.4□□□□□ -2.18
ERCC3P19447 Y_RNA.42-201ENST00000362660 108 ntBASIC1.4□□□□□ -2.19
ERCC3P19447 RNU6-832P-201ENST00000363319 107 ntBASIC1.4□□□□□ -2.19
ERCC3P19447 RNU6-42P-201ENST00000384165 107 ntBASIC1.4□□□□□ -2.19
ERCC3P19447 RNU6-554P-201ENST00000410466 106 ntBASIC1.4□□□□□ -2.19
ERCC3P19447 AL031737.1-201ENST00000450125 223 ntBASIC1.4□□□□□ -2.19
ERCC3P19447 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.4□□□□□ -2.19
ERCC3P19447 MIR4661-201ENST00000582720 75 ntBASIC1.4□□□□□ -2.19
ERCC3P19447 AL078603.1-201ENST00000603824 313 ntBASIC1.4□□□□□ -2.19
ERCC3P19447 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
ERCC3P19447 SNORD38.1-201ENST00000363863 68 ntBASIC1.39□□□□□ -2.19
ERCC3P19447 RNU6-106P-201ENST00000384405 107 ntBASIC1.39□□□□□ -2.19
ERCC3P19447 RNA5SP220-201ENST00000516298 104 ntBASIC1.39□□□□□ -2.19
ERCC3P19447 RNU6-448P-201ENST00000517052 107 ntBASIC1.39□□□□□ -2.19
ERCC3P19447 AC011195.1-201ENST00000578177 177 ntBASIC1.39□□□□□ -2.19
ERCC3P19447 RNU6-90P-201ENST00000606352 106 ntBASIC1.39□□□□□ -2.19
ERCC3P19447 MIR450A1-201ENST00000362262 91 ntBASIC1.38□□□□□ -2.19
ERCC3P19447 Y_RNA.247-201ENST00000364500 92 ntBASIC1.38□□□□□ -2.19
ERCC3P19447 RNU6-756P-201ENST00000383997 107 ntBASIC1.38□□□□□ -2.19
ERCC3P19447 RNU6-1113P-201ENST00000384348 107 ntBASIC1.38□□□□□ -2.19
ERCC3P19447 RNU6-535P-201ENST00000384722 107 ntBASIC1.38□□□□□ -2.19
ERCC3P19447 RNU6-765P-201ENST00000516916 99 ntBASIC1.38□□□□□ -2.19
ERCC3P19447 RNU6-1099P-201ENST00000363533 107 ntBASIC1.37□□□□□ -2.19
ERCC3P19447 RNA5SP117-201ENST00000365294 118 ntBASIC1.37□□□□□ -2.19
ERCC3P19447 Y_RNA.466-201ENST00000384294 113 ntBASIC1.37□□□□□ -2.19
ERCC3P19447 SNORA19.1-201ENST00000410656 129 ntBASIC1.37□□□□□ -2.19
ERCC3P19447 AC004941.2-201ENST00000427009 228 ntBASIC1.37□□□□□ -2.19
ERCC3P19447 Y_RNA.10-201ENST00000362371 110 ntBASIC1.36□□□□□ -2.19
ERCC3P19447 MIR520E-201ENST00000384867 87 ntBASIC1.36□□□□□ -2.19
ERCC3P19447 MIR548G-201ENST00000408442 89 ntBASIC1.36□□□□□ -2.19
ERCC3P19447 MIR6734-201ENST00000621166 68 ntBASIC1.36□□□□□ -2.19
ERCC3P19447 MIR6767-201ENST00000637302 66 ntBASIC1.36□□□□□ -2.19
ERCC3P19447 Y_RNA.536-201ENST00000384621 113 ntBASIC1.34□□□□□ -2.19
ERCC3P19447 SNORD45B-201ENST00000364617 72 ntBASIC1.33□□□□□ -2.2
ERCC3P19447 SNORD100-201ENST00000408573 76 ntBASIC1.33□□□□□ -2.2
ERCC3P19447 RPS29P1-201ENST00000465274 159 ntBASIC1.33□□□□□ -2.2
ERCC3P19447 MIR4295-201ENST00000585286 85 ntBASIC1.33□□□□□ -2.2
ERCC3P19447 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.33□□□□□ -2.2
ERCC3P19447 Y_RNA.377-201ENST00000365644 108 ntBASIC1.32□□□□□ -2.2
ERCC3P19447 MIR635-201ENST00000384830 98 ntBASIC1.32□□□□□ -2.2
ERCC3P19447 RNA5SP222-201ENST00000411039 105 ntBASIC1.32□□□□□ -2.2
ERCC3P19447 ACA64.5-201ENST00000516207 127 ntBASIC1.32□□□□□ -2.2
ERCC3P19447 RNU6-1006P-201ENST00000516998 103 ntBASIC1.32□□□□□ -2.2
ERCC3P19447 MIR548H5-201ENST00000580314 60 ntBASIC1.32□□□□□ -2.2
ERCC3P19447 MIR590-201ENST00000385008 97 ntBASIC1.31□□□□□ -2.2
ERCC3P19447 AC087343.1-201ENST00000477341 475 ntBASIC1.31□□□□□ -2.2
ERCC3P19447 AP003327.1-201ENST00000529684 127 ntBASIC1.31□□□□□ -2.2
ERCC3P19447 MIR3613-201ENST00000579844 87 ntBASIC1.31□□□□□ -2.2
ERCC3P19447 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
ERCC3P19447 RNU6-291P-201ENST00000384720 107 ntBASIC1.3□□□□□ -2.2
ERCC3P19447 MIR573-201ENST00000384964 99 ntBASIC1.3□□□□□ -2.2
ERCC3P19447 Y_RNA.601-201ENST00000410500 113 ntBASIC1.3□□□□□ -2.2
ERCC3P19447 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.3□□□□□ -2.2
ERCC3P19447 RNU6-850P-201ENST00000516934 103 ntBASIC1.3□□□□□ -2.2
ERCC3P19447 MIR3612-201ENST00000579753 87 ntBASIC1.3□□□□□ -2.2
ERCC3P19447 RNU7-10P-201ENST00000607194 63 ntBASIC1.3□□□□□ -2.2
ERCC3P19447 AC022709.1-201ENST00000615967 87 ntBASIC1.3□□□□□ -2.2
ERCC3P19447 HSBP1P2-201ENST00000299671 229 ntBASIC1.29□□□□□ -2.2
ERCC3P19447 Y_RNA.56-201ENST00000362798 112 ntBASIC1.29□□□□□ -2.2
ERCC3P19447 Y_RNA.81-201ENST00000362997 102 ntBASIC1.29□□□□□ -2.2
ERCC3P19447 Y_RNA.567-201ENST00000384736 106 ntBASIC1.29□□□□□ -2.2
ERCC3P19447 AC109327.2-201ENST00000448339 378 ntBASIC1.29□□□□□ -2.2
ERCC3P19447 SCARNA23-201ENST00000516060 130 ntBASIC1.29□□□□□ -2.2
ERCC3P19447 RNU6-469P-201ENST00000516253 101 ntBASIC1.29□□□□□ -2.2
ERCC3P19447 RNU6-795P-201ENST00000516323 103 ntBASIC1.29□□□□□ -2.2
ERCC3P19447 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
ERCC3P19447 RNU6-766P-201ENST00000362478 107 ntBASIC1.28□□□□□ -2.2
ERCC3P19447 RNU6-571P-201ENST00000384128 107 ntBASIC1.28□□□□□ -2.2
ERCC3P19447 AC002350.1-201ENST00000490759 375 ntBASIC1.28□□□□□ -2.2
ERCC3P19447 RNU6-904P-201ENST00000516206 101 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms