Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
ITGA4P13612 Y_RNA.190-201ENST00000363964 101 ntBASIC1.56□□□□□ -2.16
ITGA4P13612 RNU6-53P-201ENST00000365367 106 ntBASIC1.56□□□□□ -2.16
ITGA4P13612 RNU4-83P-201ENST00000410863 133 ntBASIC1.56□□□□□ -2.16
ITGA4P13612 SNRPGP12-201ENST00000449481 213 ntBASIC1.56□□□□□ -2.16
ITGA4P13612 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.56□□□□□ -2.16
ITGA4P13612 RNU7-40P-201ENST00000516397 64 ntBASIC1.56□□□□□ -2.16
ITGA4P13612 SNORA70.22-201ENST00000517160 124 ntBASIC1.56□□□□□ -2.16
ITGA4P13612 AC026421.1-201ENST00000519101 163 ntBASIC1.56□□□□□ -2.16
ITGA4P13612 MIR337-201ENST00000362281 93 ntBASIC1.55□□□□□ -2.16
ITGA4P13612 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.55□□□□□ -2.16
ITGA4P13612 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.55□□□□□ -2.16
ITGA4P13612 AC020891.4-201ENST00000605745 93 ntBASIC1.55□□□□□ -2.16
ITGA4P13612 RNU4-58P-201ENST00000363192 141 ntBASIC1.54□□□□□ -2.16
ITGA4P13612 RNY1P10-201ENST00000363268 113 ntBASIC1.54□□□□□ -2.16
ITGA4P13612 RNU6-1134P-201ENST00000365156 101 ntBASIC1.54□□□□□ -2.16
ITGA4P13612 SNORD58A-201ENST00000383875 65 ntBASIC1.54□□□□□ -2.16
ITGA4P13612 MIR222-201ENST00000384992 110 ntBASIC1.54□□□□□ -2.16
ITGA4P13612 RNU6-994P-201ENST00000410507 111 ntBASIC1.54□□□□□ -2.16
ITGA4P13612 AL157834.3-201ENST00000615543 103 ntBASIC1.54□□□□□ -2.16
ITGA4P13612 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
ITGA4P13612 SNORD116-10-201ENST00000363791 102 ntBASIC1.53□□□□□ -2.16
ITGA4P13612 SNORD73B-201ENST00000364394 72 ntBASIC1.53□□□□□ -2.16
ITGA4P13612 Y_RNA.327-201ENST00000365201 102 ntBASIC1.53□□□□□ -2.16
ITGA4P13612 MIR181B2-201ENST00000385004 89 ntBASIC1.53□□□□□ -2.16
ITGA4P13612 RPS26P5-201ENST00000418544 335 ntBASIC1.53□□□□□ -2.16
ITGA4P13612 RNU6-850P-201ENST00000516934 103 ntBASIC1.53□□□□□ -2.16
ITGA4P13612 RNU6-762P-201ENST00000517107 102 ntBASIC1.53□□□□□ -2.16
ITGA4P13612 Y_RNA.13-201ENST00000362403 112 ntBASIC1.52□□□□□ -2.17
ITGA4P13612 RNA5SP327-201ENST00000362494 101 ntBASIC1.52□□□□□ -2.17
ITGA4P13612 RNU6-1125P-201ENST00000363601 107 ntBASIC1.52□□□□□ -2.17
ITGA4P13612 RNU6-571P-201ENST00000384128 107 ntBASIC1.52□□□□□ -2.17
ITGA4P13612 RNU6-480P-201ENST00000384332 107 ntBASIC1.52□□□□□ -2.17
ITGA4P13612 MIR125B2-201ENST00000385128 89 ntBASIC1.52□□□□□ -2.17
ITGA4P13612 AL353770.2-201ENST00000620024 78 ntBASIC1.51□□□□□ -2.17
ITGA4P13612 AC025521.1-201ENST00000621624 286 ntBASIC1.51□□□□□ -2.17
ITGA4P13612 Y_RNA.57-201ENST00000362806 113 ntBASIC1.5□□□□□ -2.17
ITGA4P13612 RNU6-997P-201ENST00000384725 107 ntBASIC1.5□□□□□ -2.17
ITGA4P13612 SNORD12-201ENST00000391002 90 ntBASIC1.5□□□□□ -2.17
ITGA4P13612 AL513043.2-201ENST00000573941 143 ntBASIC1.5□□□□□ -2.17
ITGA4P13612 MIR4676-201ENST00000583078 72 ntBASIC1.5□□□□□ -2.17
ITGA4P13612 MIR6082-201ENST00000613604 109 ntBASIC1.5□□□□□ -2.17
ITGA4P13612 RNU6-369P-201ENST00000362515 102 ntBASIC1.49□□□□□ -2.17
ITGA4P13612 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
ITGA4P13612 SNORA25-201ENST00000384384 134 ntBASIC1.49□□□□□ -2.17
ITGA4P13612 AC002429.1-201ENST00000437672 148 ntBASIC1.49□□□□□ -2.17
ITGA4P13612 AC013244.2-201ENST00000603396 103 ntBASIC1.49□□□□□ -2.17
ITGA4P13612 MIR7974-201ENST00000615835 79 ntBASIC1.49□□□□□ -2.17
ITGA4P13612 MIR8066-201ENST00000617280 78 ntBASIC1.49□□□□□ -2.17
ITGA4P13612 Y_RNA.593-201ENST00000410292 98 ntBASIC1.48□□□□□ -2.17
ITGA4P13612 RNA5SP247-201ENST00000411181 105 ntBASIC1.48□□□□□ -2.17
ITGA4P13612 SNORA72.7-201ENST00000516349 94 ntBASIC1.48□□□□□ -2.17
ITGA4P13612 RNU7-156P-201ENST00000517214 74 ntBASIC1.48□□□□□ -2.17
ITGA4P13612 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
ITGA4P13612 Y_RNA.17-201ENST00000362433 111 ntBASIC1.47□□□□□ -2.17
ITGA4P13612 Y_RNA.42-201ENST00000362660 108 ntBASIC1.47□□□□□ -2.17
ITGA4P13612 RNU6-392P-201ENST00000364926 101 ntBASIC1.47□□□□□ -2.17
ITGA4P13612 MIR1302-4-201ENST00000408701 150 ntBASIC1.47□□□□□ -2.17
ITGA4P13612 RNU6-1194P-201ENST00000516208 104 ntBASIC1.47□□□□□ -2.17
ITGA4P13612 MIR101-2-201ENST00000362195 79 ntBASIC1.46□□□□□ -2.18
ITGA4P13612 RNU6-364P-201ENST00000384387 107 ntBASIC1.46□□□□□ -2.18
ITGA4P13612 MIR100-201ENST00000385259 80 ntBASIC1.46□□□□□ -2.18
ITGA4P13612 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
ITGA4P13612 SNORD100-201ENST00000408573 76 ntBASIC1.46□□□□□ -2.18
ITGA4P13612 RNU6-765P-201ENST00000516916 99 ntBASIC1.46□□□□□ -2.18
ITGA4P13612 AC068338.1-201ENST00000565567 176 ntBASIC1.46□□□□□ -2.18
ITGA4P13612 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
ITGA4P13612 MIR450A2-201ENST00000385022 100 ntBASIC1.45□□□□□ -2.18
ITGA4P13612 MIR938-201ENST00000401216 83 ntBASIC1.45□□□□□ -2.18
ITGA4P13612 RNY4P29-201ENST00000410801 97 ntBASIC1.45□□□□□ -2.18
ITGA4P13612 RNU1-123P-201ENST00000458950 160 ntBASIC1.45□□□□□ -2.18
ITGA4P13612 RNU6-977P-201ENST00000516411 103 ntBASIC1.45□□□□□ -2.18
ITGA4P13612 MIR4804-201ENST00000581683 73 ntBASIC1.45□□□□□ -2.18
ITGA4P13612 SNORD92-201ENST00000585078 85 ntBASIC1.45□□□□□ -2.18
ITGA4P13612 AC062037.1-201ENST00000605302 128 ntBASIC1.45□□□□□ -2.18
ITGA4P13612 MIR8070-201ENST00000616510 88 ntBASIC1.45□□□□□ -2.18
ITGA4P13612 AC027335.2-201ENST00000624030 375 ntBASIC1.45□□□□□ -2.18
ITGA4P13612 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.45□□□□□ -2.18
ITGA4P13612 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
ITGA4P13612 MIR494-201ENST00000349529 81 ntBASIC1.44□□□□□ -2.18
ITGA4P13612 MIR1-1-201ENST00000362147 71 ntBASIC1.44□□□□□ -2.18
ITGA4P13612 SNORD116-22-201ENST00000384430 92 ntBASIC1.44□□□□□ -2.18
ITGA4P13612 MIR516A2-201ENST00000384888 90 ntBASIC1.44□□□□□ -2.18
ITGA4P13612 MIR516A1-201ENST00000385033 90 ntBASIC1.44□□□□□ -2.18
ITGA4P13612 SNORA26.2-201ENST00000390922 122 ntBASIC1.44□□□□□ -2.18
ITGA4P13612 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.44□□□□□ -2.18
ITGA4P13612 Y_RNA.609-201ENST00000410669 89 ntBASIC1.44□□□□□ -2.18
ITGA4P13612 RNU6-402P-201ENST00000410678 103 ntBASIC1.44□□□□□ -2.18
ITGA4P13612 AC067940.1-201ENST00000458411 300 ntBASIC1.44□□□□□ -2.18
ITGA4P13612 RPS29P23-201ENST00000458635 123 ntBASIC1.44□□□□□ -2.18
ITGA4P13612 RNU7-102P-201ENST00000458948 62 ntBASIC1.44□□□□□ -2.18
ITGA4P13612 MIR6078-201ENST00000611069 100 ntBASIC1.44□□□□□ -2.18
ITGA4P13612 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
ITGA4P13612 SNORD26-201ENST00000384147 75 ntBASIC1.43□□□□□ -2.18
ITGA4P13612 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.43□□□□□ -2.18
ITGA4P13612 Y_RNA.697-201ENST00000516776 113 ntBASIC1.43□□□□□ -2.18
ITGA4P13612 MIR4668-201ENST00000582284 70 ntBASIC1.43□□□□□ -2.18
ITGA4P13612 Y_RNA.226-201ENST00000364337 114 ntBASIC1.42□□□□□ -2.18
ITGA4P13612 RNY1P4-201ENST00000384595 115 ntBASIC1.42□□□□□ -2.18
ITGA4P13612 MIR1827-201ENST00000408549 66 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 154.8 ms