Protein–RNA interactions for Protein: P08247

SYP, Synaptophysin, humanhuman

Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPP08247 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
SYPP08247 Y_RNA.57-201ENST00000362806 113 ntBASIC1.68□□□□□ -2.14
SYPP08247 RNU6-509P-201ENST00000363519 107 ntBASIC1.68□□□□□ -2.14
SYPP08247 Y_RNA.191-201ENST00000363972 113 ntBASIC1.68□□□□□ -2.14
SYPP08247 RNU1-36P-201ENST00000365130 165 ntBASIC1.68□□□□□ -2.14
SYPP08247 Y_RNA.355-201ENST00000365462 98 ntBASIC1.68□□□□□ -2.14
SYPP08247 SNORD93-201ENST00000408813 74 ntBASIC1.68□□□□□ -2.14
SYPP08247 RNU7-95P-201ENST00000459222 64 ntBASIC1.68□□□□□ -2.14
SYPP08247 RNU7-171P-201ENST00000459581 62 ntBASIC1.68□□□□□ -2.14
SYPP08247 RN7SKP88-201ENST00000516847 250 ntBASIC1.68□□□□□ -2.14
SYPP08247 7SK.8-201ENST00000612110 250 ntBASIC1.68□□□□□ -2.14
SYPP08247 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.68□□□□□ -2.14
SYPP08247 7SK.11-201ENST00000615477 250 ntBASIC1.68□□□□□ -2.14
SYPP08247 7SK.13-201ENST00000622040 250 ntBASIC1.68□□□□□ -2.14
SYPP08247 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SYPP08247 SNORA75.2-201ENST00000391138 150 ntBASIC1.67□□□□□ -2.14
SYPP08247 SNORA75.3-201ENST00000391231 150 ntBASIC1.67□□□□□ -2.14
SYPP08247 snoU13.21-201ENST00000459368 105 ntBASIC1.67□□□□□ -2.14
SYPP08247 RNU6-531P-201ENST00000516694 104 ntBASIC1.67□□□□□ -2.14
SYPP08247 SNORA25.16-201ENST00000516741 121 ntBASIC1.67□□□□□ -2.14
SYPP08247 MIR3202-2-201ENST00000635980 79 ntBASIC1.67□□□□□ -2.14
SYPP08247 RNU6-228P-201ENST00000362700 106 ntBASIC1.66□□□□□ -2.14
SYPP08247 RNU6-1124P-201ENST00000384169 107 ntBASIC1.66□□□□□ -2.14
SYPP08247 SNORA31.2-201ENST00000516019 134 ntBASIC1.66□□□□□ -2.14
SYPP08247 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.66□□□□□ -2.14
SYPP08247 MIR548BB-201ENST00000626714 66 ntBASIC1.66□□□□□ -2.14
SYPP08247 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.66□□□□□ -2.14
SYPP08247 RNU4-58P-201ENST00000363192 141 ntBASIC1.65□□□□□ -2.15
SYPP08247 SNORD113.3-201ENST00000364630 78 ntBASIC1.65□□□□□ -2.15
SYPP08247 Y_RNA.327-201ENST00000365201 102 ntBASIC1.65□□□□□ -2.15
SYPP08247 Y_RNA.330-201ENST00000365230 109 ntBASIC1.65□□□□□ -2.15
SYPP08247 Y_RNA.363-201ENST00000365529 113 ntBASIC1.65□□□□□ -2.15
SYPP08247 RNU6-787P-201ENST00000384032 107 ntBASIC1.65□□□□□ -2.15
SYPP08247 Y_RNA.611-201ENST00000410682 108 ntBASIC1.65□□□□□ -2.15
SYPP08247 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.65□□□□□ -2.15
SYPP08247 RNU7-185P-201ENST00000459215 60 ntBASIC1.65□□□□□ -2.15
SYPP08247 RNU6-902P-201ENST00000517212 91 ntBASIC1.65□□□□□ -2.15
SYPP08247 AC036111.3-201ENST00000526389 112 ntBASIC1.65□□□□□ -2.15
SYPP08247 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.65□□□□□ -2.15
SYPP08247 AC006160.2-201ENST00000637708 154 ntBASIC1.65□□□□□ -2.15
SYPP08247 AC023934.1-201ENST00000574529 2389 ntBASIC1.64□□□□□ -2.15
SYPP08247 SNORD115-27-201ENST00000364430 82 ntBASIC1.64□□□□□ -2.15
SYPP08247 RNA5SP363-201ENST00000365072 115 ntBASIC1.64□□□□□ -2.15
SYPP08247 RNU6-53P-201ENST00000365367 106 ntBASIC1.64□□□□□ -2.15
SYPP08247 Y_RNA.426-201ENST00000384068 113 ntBASIC1.64□□□□□ -2.15
SYPP08247 MIR934-201ENST00000401241 83 ntBASIC1.64□□□□□ -2.15
SYPP08247 AC087499.7-201ENST00000441958 109 ntBASIC1.64□□□□□ -2.15
SYPP08247 MIR4419B-201ENST00000577260 68 ntBASIC1.64□□□□□ -2.15
SYPP08247 MIR4666B-201ENST00000578142 81 ntBASIC1.64□□□□□ -2.15
SYPP08247 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.64□□□□□ -2.15
SYPP08247 RNU6-403P-201ENST00000363163 104 ntBASIC1.63□□□□□ -2.15
SYPP08247 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.63□□□□□ -2.15
SYPP08247 RNU6-519P-201ENST00000410590 108 ntBASIC1.63□□□□□ -2.15
SYPP08247 SNORD83.1-201ENST00000411362 77 ntBASIC1.63□□□□□ -2.15
SYPP08247 RNU6-638P-201ENST00000516582 104 ntBASIC1.63□□□□□ -2.15
SYPP08247 MIR3122-201ENST00000577243 73 ntBASIC1.63□□□□□ -2.15
SYPP08247 SNORA72.6-201ENST00000384520 129 ntBASIC1.62□□□□□ -2.15
SYPP08247 SNORA67.6-201ENST00000391093 99 ntBASIC1.62□□□□□ -2.15
SYPP08247 MIR1257-201ENST00000408490 117 ntBASIC1.62□□□□□ -2.15
SYPP08247 RNU6-1194P-201ENST00000516208 104 ntBASIC1.62□□□□□ -2.15
SYPP08247 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.62□□□□□ -2.15
SYPP08247 RNU6-934P-201ENST00000365154 107 ntBASIC1.61□□□□□ -2.15
SYPP08247 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.61□□□□□ -2.15
SYPP08247 Y_RNA.648-201ENST00000459455 110 ntBASIC1.61□□□□□ -2.15
SYPP08247 snoU13.18-201ENST00000459483 104 ntBASIC1.61□□□□□ -2.15
SYPP08247 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.61□□□□□ -2.15
SYPP08247 SNORD36A-201ENST00000362874 73 ntBASIC1.6□□□□□ -2.15
SYPP08247 RNU1-42P-201ENST00000364033 160 ntBASIC1.6□□□□□ -2.15
SYPP08247 Y_RNA.224-201ENST00000364308 111 ntBASIC1.6□□□□□ -2.15
SYPP08247 RNU6-392P-201ENST00000364926 101 ntBASIC1.6□□□□□ -2.15
SYPP08247 SNORD48-201ENST00000364953 64 ntBASIC1.6□□□□□ -2.15
SYPP08247 MIR516A2-201ENST00000384888 90 ntBASIC1.6□□□□□ -2.15
SYPP08247 MIR516A1-201ENST00000385033 90 ntBASIC1.6□□□□□ -2.15
SYPP08247 MIR1255A-201ENST00000408338 113 ntBASIC1.6□□□□□ -2.15
SYPP08247 RNU7-85P-201ENST00000458851 63 ntBASIC1.6□□□□□ -2.15
SYPP08247 SNORD4B-201ENST00000459083 72 ntBASIC1.6□□□□□ -2.15
SYPP08247 RNU7-21P-201ENST00000459430 62 ntBASIC1.6□□□□□ -2.15
SYPP08247 RNA5SP395-201ENST00000516567 118 ntBASIC1.6□□□□□ -2.15
SYPP08247 AC106800.4-201ENST00000614905 153 ntBASIC1.6□□□□□ -2.15
SYPP08247 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.59□□□□□ -2.15
SYPP08247 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
SYPP08247 SNORA7.1-201ENST00000363750 139 ntBASIC1.59□□□□□ -2.15
SYPP08247 MIR519C-201ENST00000385053 87 ntBASIC1.59□□□□□ -2.15
SYPP08247 MIR517C-201ENST00000385103 95 ntBASIC1.59□□□□□ -2.15
SYPP08247 RNU6-1254P-201ENST00000391266 104 ntBASIC1.59□□□□□ -2.15
SYPP08247 SNORD111-201ENST00000408139 94 ntBASIC1.59□□□□□ -2.15
SYPP08247 RNA5SP225-201ENST00000410874 135 ntBASIC1.59□□□□□ -2.15
SYPP08247 AL591704.2-201ENST00000421658 181 ntBASIC1.59□□□□□ -2.15
SYPP08247 AC015818.7-201ENST00000428754 109 ntBASIC1.59□□□□□ -2.15
SYPP08247 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.59□□□□□ -2.15
SYPP08247 RNU1-92P-201ENST00000517017 135 ntBASIC1.59□□□□□ -2.15
SYPP08247 MIR6082-201ENST00000613604 109 ntBASIC1.59□□□□□ -2.15
SYPP08247 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.58□□□□□ -2.16
SYPP08247 Y_RNA.13-201ENST00000362403 112 ntBASIC1.58□□□□□ -2.16
SYPP08247 Y_RNA.437-201ENST00000384113 113 ntBASIC1.58□□□□□ -2.16
SYPP08247 RNU6-524P-201ENST00000384270 107 ntBASIC1.58□□□□□ -2.16
SYPP08247 SNORA80D-201ENST00000384488 135 ntBASIC1.58□□□□□ -2.16
SYPP08247 RNU6-910P-201ENST00000390844 107 ntBASIC1.58□□□□□ -2.16
SYPP08247 SNORD100-201ENST00000408573 76 ntBASIC1.58□□□□□ -2.16
SYPP08247 Y_RNA.607-201ENST00000410597 98 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 203.4 ms