Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 RNU6-472P-201ENST00000384299 107 ntBASIC-1.19□□□□□ -2.6
CTSDP07339 RNU6-1215P-201ENST00000384441 102 ntBASIC-1.19□□□□□ -2.6
CTSDP07339 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.19□□□□□ -2.6
CTSDP07339 SNORD77B-201ENST00000391112 67 ntBASIC-1.19□□□□□ -2.6
CTSDP07339 RNU6-121P-201ENST00000410525 99 ntBASIC-1.19□□□□□ -2.6
CTSDP07339 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.19□□□□□ -2.6
CTSDP07339 RNU7-2P-201ENST00000516096 62 ntBASIC-1.19□□□□□ -2.6
CTSDP07339 RNA5SP470-201ENST00000516463 106 ntBASIC-1.19□□□□□ -2.6
CTSDP07339 RNU6-850P-201ENST00000516934 103 ntBASIC-1.19□□□□□ -2.6
CTSDP07339 RNY1P9-201ENST00000532431 109 ntBASIC-1.19□□□□□ -2.6
CTSDP07339 MIR378F-201ENST00000578143 78 ntBASIC-1.19□□□□□ -2.6
CTSDP07339 RNU2-4P-201ENST00000606190 192 ntBASIC-1.19□□□□□ -2.6
CTSDP07339 MIR8068-201ENST00000618032 68 ntBASIC-1.19□□□□□ -2.6
CTSDP07339 Y_RNA.35-201ENST00000362601 101 ntBASIC-1.2□□□□□ -2.6
CTSDP07339 snoU2_19.2-201ENST00000363024 80 ntBASIC-1.2□□□□□ -2.6
CTSDP07339 Y_RNA.275-201ENST00000364726 110 ntBASIC-1.2□□□□□ -2.6
CTSDP07339 SNORD115-35-201ENST00000365122 82 ntBASIC-1.2□□□□□ -2.6
CTSDP07339 RNU6-431P-201ENST00000383874 107 ntBASIC-1.2□□□□□ -2.6
CTSDP07339 MIR516A2-201ENST00000384888 90 ntBASIC-1.2□□□□□ -2.6
CTSDP07339 MIR516A1-201ENST00000385033 90 ntBASIC-1.2□□□□□ -2.6
CTSDP07339 SNORD64-201ENST00000386683 67 ntBASIC-1.2□□□□□ -2.6
CTSDP07339 RNU6-381P-201ENST00000391259 108 ntBASIC-1.2□□□□□ -2.6
CTSDP07339 RN7SKP19-201ENST00000516016 252 ntBASIC-1.2□□□□□ -2.6
CTSDP07339 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-1.2□□□□□ -2.6
CTSDP07339 AC080013.6-201ENST00000606185 215 ntBASIC-1.2□□□□□ -2.6
CTSDP07339 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-1.2□□□□□ -2.6
CTSDP07339 SNORD74.6-201ENST00000364796 70 ntBASIC-1.21□□□□□ -2.6
CTSDP07339 Y_RNA.447-201ENST00000384184 113 ntBASIC-1.21□□□□□ -2.6
CTSDP07339 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.21□□□□□ -2.6
CTSDP07339 RNU6-277P-201ENST00000516272 106 ntBASIC-1.21□□□□□ -2.6
CTSDP07339 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.21□□□□□ -2.6
CTSDP07339 MIR376B-201ENST00000614515 100 ntBASIC-1.21□□□□□ -2.6
CTSDP07339 Y_RNA.6-201ENST00000362350 114 ntBASIC-1.22□□□□□ -2.6
CTSDP07339 Y_RNA.64-201ENST00000362845 102 ntBASIC-1.22□□□□□ -2.6
CTSDP07339 RNU6-623P-201ENST00000363143 105 ntBASIC-1.22□□□□□ -2.6
CTSDP07339 RNA5SP192-201ENST00000364404 120 ntBASIC-1.22□□□□□ -2.6
CTSDP07339 Y_RNA.389-201ENST00000383924 113 ntBASIC-1.22□□□□□ -2.6
CTSDP07339 RNU6-476P-201ENST00000384726 107 ntBASIC-1.22□□□□□ -2.6
CTSDP07339 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.22□□□□□ -2.6
CTSDP07339 Y_RNA.596-201ENST00000410462 109 ntBASIC-1.22□□□□□ -2.6
CTSDP07339 SCARNA18B-201ENST00000458806 135 ntBASIC-1.22□□□□□ -2.6
CTSDP07339 SERF1AP1-201ENST00000514575 187 ntBASIC-1.22□□□□□ -2.6
CTSDP07339 AC009779.6-201ENST00000603972 165 ntBASIC-1.22□□□□□ -2.6
CTSDP07339 TRDV1-202ENST00000621643 102 ntBASIC-1.22□□□□□ -2.6
CTSDP07339 Y_RNA.31-201ENST00000362574 102 ntBASIC-1.23□□□□□ -2.61
CTSDP07339 Y_RNA.117-201ENST00000363294 101 ntBASIC-1.23□□□□□ -2.61
CTSDP07339 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.23□□□□□ -2.61
CTSDP07339 MT-TL1-201ENST00000386347 75 ntBASIC-1.23□□□□□ -2.61
CTSDP07339 AC097510.1-201ENST00000510945 133 ntBASIC-1.23□□□□□ -2.61
CTSDP07339 MIR3115-201ENST00000577915 68 ntBASIC-1.23□□□□□ -2.61
CTSDP07339 MIR3165-201ENST00000579874 75 ntBASIC-1.23□□□□□ -2.61
CTSDP07339 MIR6854-201ENST00000614935 69 ntBASIC-1.23□□□□□ -2.61
CTSDP07339 AC087741.2-201ENST00000619415 172 ntBASIC-1.23□□□□□ -2.61
CTSDP07339 Y_RNA.142-201ENST00000363491 102 ntBASIC-1.24□□□□□ -2.61
CTSDP07339 RNU6-103P-201ENST00000363686 107 ntBASIC-1.24□□□□□ -2.61
CTSDP07339 Y_RNA.207-201ENST00000364142 106 ntBASIC-1.24□□□□□ -2.61
CTSDP07339 RNU6-905P-201ENST00000384434 107 ntBASIC-1.24□□□□□ -2.61
CTSDP07339 MIR216B-201ENST00000390186 82 ntBASIC-1.24□□□□□ -2.61
CTSDP07339 RNU6-876P-201ENST00000391295 104 ntBASIC-1.24□□□□□ -2.61
CTSDP07339 AL121914.1-201ENST00000450188 156 ntBASIC-1.24□□□□□ -2.61
CTSDP07339 RNA5SP236-201ENST00000516169 116 ntBASIC-1.24□□□□□ -2.61
CTSDP07339 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.24□□□□□ -2.61
CTSDP07339 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-1.24□□□□□ -2.61
CTSDP07339 MIR382-201ENST00000637119 76 ntBASIC-1.24□□□□□ -2.61
CTSDP07339 MIR582-201ENST00000365731 98 ntBASIC-1.25□□□□□ -2.61
CTSDP07339 RNU6-1254P-201ENST00000391266 104 ntBASIC-1.25□□□□□ -2.61
CTSDP07339 SNORD57-201ENST00000448188 72 ntBASIC-1.25□□□□□ -2.61
CTSDP07339 SNORD2.1-201ENST00000458762 69 ntBASIC-1.25□□□□□ -2.61
CTSDP07339 RNU7-164P-201ENST00000459221 62 ntBASIC-1.25□□□□□ -2.61
CTSDP07339 SNORA40.15-201ENST00000516884 107 ntBASIC-1.25□□□□□ -2.61
CTSDP07339 AC021443.1-201ENST00000604478 211 ntBASIC-1.25□□□□□ -2.61
CTSDP07339 U6.100-201ENST00000636230 99 ntBASIC-1.25□□□□□ -2.61
CTSDP07339 MIR4320-201ENST00000636981 65 ntBASIC-1.25□□□□□ -2.61
CTSDP07339 MIR1302-1-201ENST00000637932 143 ntBASIC-1.25□□□□□ -2.61
CTSDP07339 Y_RNA.16-201ENST00000362421 102 ntBASIC-1.26□□□□□ -2.61
CTSDP07339 Y_RNA.52-201ENST00000362760 96 ntBASIC-1.26□□□□□ -2.61
CTSDP07339 RNU4-32P-201ENST00000363404 141 ntBASIC-1.26□□□□□ -2.61
CTSDP07339 Y_RNA.214-201ENST00000364201 112 ntBASIC-1.26□□□□□ -2.61
CTSDP07339 RNU4-17P-201ENST00000365598 141 ntBASIC-1.26□□□□□ -2.61
CTSDP07339 Y_RNA.437-201ENST00000384113 113 ntBASIC-1.26□□□□□ -2.61
CTSDP07339 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.26□□□□□ -2.61
CTSDP07339 MIR147A-201ENST00000385079 72 ntBASIC-1.26□□□□□ -2.61
CTSDP07339 MIR1252-201ENST00000408861 65 ntBASIC-1.26□□□□□ -2.61
CTSDP07339 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-1.26□□□□□ -2.61
CTSDP07339 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-1.26□□□□□ -2.61
CTSDP07339 AC138907.4-201ENST00000570107 226 ntBASIC-1.26□□□□□ -2.61
CTSDP07339 SNORD27-201ENST00000363981 72 ntBASIC-1.27□□□□□ -2.61
CTSDP07339 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.27□□□□□ -2.61
CTSDP07339 Y_RNA.318-201ENST00000365131 97 ntBASIC-1.27□□□□□ -2.61
CTSDP07339 Y_RNA.360-201ENST00000365512 102 ntBASIC-1.27□□□□□ -2.61
CTSDP07339 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-1.27□□□□□ -2.61
CTSDP07339 Y_RNA.601-201ENST00000410500 113 ntBASIC-1.27□□□□□ -2.61
CTSDP07339 AL161932.1-201ENST00000437408 146 ntBASIC-1.27□□□□□ -2.61
CTSDP07339 Y_RNA.632-201ENST00000459189 102 ntBASIC-1.27□□□□□ -2.61
CTSDP07339 SNORD19B-201ENST00000459623 84 ntBASIC-1.27□□□□□ -2.61
CTSDP07339 RNU7-123P-201ENST00000515911 60 ntBASIC-1.27□□□□□ -2.61
CTSDP07339 RNU6-240P-201ENST00000516098 97 ntBASIC-1.27□□□□□ -2.61
CTSDP07339 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-1.27□□□□□ -2.61
CTSDP07339 MIR4306-201ENST00000583390 91 ntBASIC-1.27□□□□□ -2.61
CTSDP07339 AC073869.6-201ENST00000640656 341 ntBASIC-1.27□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 301 ms