Protein–RNA interactions for Protein: P07197

NEFM, Neurofilament medium polypeptide, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFMP07197 Y_RNA.57-201ENST00000362806 113 ntBASIC1.93□□□□□ -2.1
NEFMP07197 Y_RNA.119-201ENST00000363301 96 ntBASIC1.93□□□□□ -2.1
NEFMP07197 RNU6-1065P-201ENST00000384513 106 ntBASIC1.93□□□□□ -2.1
NEFMP07197 MIR1185-1-201ENST00000408598 86 ntBASIC1.93□□□□□ -2.1
NEFMP07197 MIR4781-201ENST00000585250 76 ntBASIC1.93□□□□□ -2.1
NEFMP07197 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
NEFMP07197 SNORD115-37-201ENST00000363768 82 ntBASIC1.92□□□□□ -2.1
NEFMP07197 Y_RNA.313-201ENST00000365095 103 ntBASIC1.92□□□□□ -2.1
NEFMP07197 RPS29P23-201ENST00000458635 123 ntBASIC1.92□□□□□ -2.1
NEFMP07197 RNU6-850P-201ENST00000516934 103 ntBASIC1.92□□□□□ -2.1
NEFMP07197 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.92□□□□□ -2.1
NEFMP07197 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
NEFMP07197 RNU6-53P-201ENST00000365367 106 ntBASIC1.91□□□□□ -2.1
NEFMP07197 AP1B1P2-201ENST00000416196 106 ntBASIC1.91□□□□□ -2.1
NEFMP07197 AC079140.2-201ENST00000506193 142 ntBASIC1.91□□□□□ -2.1
NEFMP07197 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.91□□□□□ -2.1
NEFMP07197 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.91□□□□□ -2.1
NEFMP07197 SNORD115-27-201ENST00000364430 82 ntBASIC1.9□□□□□ -2.11
NEFMP07197 MIR18B-201ENST00000454574 71 ntBASIC1.9□□□□□ -2.11
NEFMP07197 AC093729.1-201ENST00000513074 128 ntBASIC1.9□□□□□ -2.11
NEFMP07197 RNU6-857P-201ENST00000515893 110 ntBASIC1.9□□□□□ -2.11
NEFMP07197 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.9□□□□□ -2.11
NEFMP07197 Y_RNA.244-201ENST00000364484 109 ntBASIC1.89□□□□□ -2.11
NEFMP07197 SNORD1A-201ENST00000364968 72 ntBASIC1.89□□□□□ -2.11
NEFMP07197 RNU6-580P-201ENST00000365159 107 ntBASIC1.89□□□□□ -2.11
NEFMP07197 RNU6-24P-201ENST00000384440 107 ntBASIC1.89□□□□□ -2.11
NEFMP07197 RNU4-83P-201ENST00000410863 133 ntBASIC1.89□□□□□ -2.11
NEFMP07197 AC245517.4-201ENST00000448601 281 ntBASIC1.89□□□□□ -2.11
NEFMP07197 RNU7-95P-201ENST00000459222 64 ntBASIC1.89□□□□□ -2.11
NEFMP07197 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.89□□□□□ -2.11
NEFMP07197 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.89□□□□□ -2.11
NEFMP07197 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.88□□□□□ -2.11
NEFMP07197 RNU6-652P-201ENST00000365488 107 ntBASIC1.88□□□□□ -2.11
NEFMP07197 RNU1-78P-201ENST00000391248 165 ntBASIC1.88□□□□□ -2.11
NEFMP07197 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.88□□□□□ -2.11
NEFMP07197 AC087499.7-201ENST00000441958 109 ntBASIC1.88□□□□□ -2.11
NEFMP07197 Y_RNA.648-201ENST00000459455 110 ntBASIC1.88□□□□□ -2.11
NEFMP07197 AC019176.1-201ENST00000518519 225 ntBASIC1.88□□□□□ -2.11
NEFMP07197 MIR3937-201ENST00000580135 106 ntBASIC1.88□□□□□ -2.11
NEFMP07197 MIR4422-201ENST00000581938 83 ntBASIC1.88□□□□□ -2.11
NEFMP07197 MIR7974-201ENST00000615835 79 ntBASIC1.88□□□□□ -2.11
NEFMP07197 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.87□□□□□ -2.11
NEFMP07197 RNU4-58P-201ENST00000363192 141 ntBASIC1.87□□□□□ -2.11
NEFMP07197 Y_RNA.316-201ENST00000365118 111 ntBASIC1.87□□□□□ -2.11
NEFMP07197 RNU6-524P-201ENST00000384270 107 ntBASIC1.87□□□□□ -2.11
NEFMP07197 MIR1236-201ENST00000408340 102 ntBASIC1.87□□□□□ -2.11
NEFMP07197 RNU6-321P-201ENST00000410912 106 ntBASIC1.87□□□□□ -2.11
NEFMP07197 BX276092.1-201ENST00000427368 251 ntBASIC1.87□□□□□ -2.11
NEFMP07197 RNU6-654P-201ENST00000364373 107 ntBASIC1.86□□□□□ -2.11
NEFMP07197 SNORD4B-201ENST00000459083 72 ntBASIC1.86□□□□□ -2.11
NEFMP07197 AC019288.1-201ENST00000557918 224 ntBASIC1.86□□□□□ -2.11
NEFMP07197 MIR3664-201ENST00000579074 99 ntBASIC1.86□□□□□ -2.11
NEFMP07197 uc_338.6-201ENST00000613544 171 ntBASIC1.86□□□□□ -2.11
NEFMP07197 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
NEFMP07197 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
NEFMP07197 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
NEFMP07197 SNORA7.1-201ENST00000363750 139 ntBASIC1.85□□□□□ -2.11
NEFMP07197 SNORA72.6-201ENST00000384520 129 ntBASIC1.85□□□□□ -2.11
NEFMP07197 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
NEFMP07197 SNORD93-201ENST00000408813 74 ntBASIC1.85□□□□□ -2.11
NEFMP07197 RNA5SP61-201ENST00000516453 100 ntBASIC1.85□□□□□ -2.11
NEFMP07197 MIR4421-201ENST00000578133 69 ntBASIC1.85□□□□□ -2.11
NEFMP07197 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.84□□□□□ -2.11
NEFMP07197 RNU6-1194P-201ENST00000516208 104 ntBASIC1.84□□□□□ -2.11
NEFMP07197 MIR4491-201ENST00000581087 68 ntBASIC1.84□□□□□ -2.11
NEFMP07197 AL359821.1-201ENST00000605519 182 ntBASIC1.84□□□□□ -2.11
NEFMP07197 Y_RNA.226-201ENST00000364337 114 ntBASIC1.83□□□□□ -2.12
NEFMP07197 RNU1-36P-201ENST00000365130 165 ntBASIC1.83□□□□□ -2.12
NEFMP07197 Y_RNA.588-201ENST00000391254 102 ntBASIC1.83□□□□□ -2.12
NEFMP07197 RNU6-1254P-201ENST00000391266 104 ntBASIC1.83□□□□□ -2.12
NEFMP07197 RNA5SP95-201ENST00000410319 137 ntBASIC1.83□□□□□ -2.12
NEFMP07197 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.83□□□□□ -2.12
NEFMP07197 TRMT112P2-201ENST00000512910 132 ntBASIC1.83□□□□□ -2.12
NEFMP07197 AC140658.3-201ENST00000567603 271 ntBASIC1.83□□□□□ -2.12
NEFMP07197 MIR26B-201ENST00000362251 77 ntBASIC1.82□□□□□ -2.12
NEFMP07197 RNU6-1296P-201ENST00000383879 107 ntBASIC1.82□□□□□ -2.12
NEFMP07197 RNU6-243P-201ENST00000391140 107 ntBASIC1.82□□□□□ -2.12
NEFMP07197 RNU6-531P-201ENST00000516694 104 ntBASIC1.82□□□□□ -2.12
NEFMP07197 RNU6-165P-201ENST00000517170 99 ntBASIC1.82□□□□□ -2.12
NEFMP07197 AL512310.8-201ENST00000550183 120 ntBASIC1.82□□□□□ -2.12
NEFMP07197 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.81□□□□□ -2.12
NEFMP07197 RNU4-32P-201ENST00000363404 141 ntBASIC1.81□□□□□ -2.12
NEFMP07197 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
NEFMP07197 RNU7-85P-201ENST00000458851 63 ntBASIC1.81□□□□□ -2.12
NEFMP07197 SNORA25.16-201ENST00000516741 121 ntBASIC1.81□□□□□ -2.12
NEFMP07197 AL157834.3-201ENST00000615543 103 ntBASIC1.81□□□□□ -2.12
NEFMP07197 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.81□□□□□ -2.12
NEFMP07197 RNU6-403P-201ENST00000363163 104 ntBASIC1.8□□□□□ -2.12
NEFMP07197 Y_RNA.221-201ENST00000364248 96 ntBASIC1.8□□□□□ -2.12
NEFMP07197 MIR1257-201ENST00000408490 117 ntBASIC1.8□□□□□ -2.12
NEFMP07197 RNU6-1054P-201ENST00000411293 104 ntBASIC1.8□□□□□ -2.12
NEFMP07197 RNU6-902P-201ENST00000517212 91 ntBASIC1.8□□□□□ -2.12
NEFMP07197 RNU7-10P-201ENST00000607194 63 ntBASIC1.8□□□□□ -2.12
NEFMP07197 MIR4662A-201ENST00000637499 67 ntBASIC1.8□□□□□ -2.12
NEFMP07197 SNORD36A-201ENST00000362874 73 ntBASIC1.79□□□□□ -2.12
NEFMP07197 MIR516A2-201ENST00000384888 90 ntBASIC1.79□□□□□ -2.12
NEFMP07197 MIR516A1-201ENST00000385033 90 ntBASIC1.79□□□□□ -2.12
NEFMP07197 MIR150-201ENST00000385048 84 ntBASIC1.79□□□□□ -2.12
NEFMP07197 RNU6-65P-201ENST00000516332 98 ntBASIC1.79□□□□□ -2.12
NEFMP07197 MIR4712-201ENST00000583750 82 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 270.5 ms