Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 MIR3681-201ENST00000580089 72 ntBASIC-1.23□□□□□ -2.61
HLA-DQB2P05538 Y_RNA.35-201ENST00000362601 101 ntBASIC-1.24□□□□□ -2.61
HLA-DQB2P05538 Y_RNA.60-201ENST00000362831 98 ntBASIC-1.24□□□□□ -2.61
HLA-DQB2P05538 Y_RNA.215-201ENST00000364204 112 ntBASIC-1.24□□□□□ -2.61
HLA-DQB2P05538 Y_RNA.299-201ENST00000364973 94 ntBASIC-1.24□□□□□ -2.61
HLA-DQB2P05538 Y_RNA.315-201ENST00000365117 102 ntBASIC-1.24□□□□□ -2.61
HLA-DQB2P05538 Y_RNA.389-201ENST00000383924 113 ntBASIC-1.24□□□□□ -2.61
HLA-DQB2P05538 Y_RNA.785-201ENST00000384290 109 ntBASIC-1.24□□□□□ -2.61
HLA-DQB2P05538 MTATP6P23-201ENST00000440153 476 ntBASIC-1.24□□□□□ -2.61
HLA-DQB2P05538 SPINT5P-201ENST00000448174 155 ntBASIC-1.24□□□□□ -2.61
HLA-DQB2P05538 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.24□□□□□ -2.61
HLA-DQB2P05538 RNY3P15-201ENST00000516297 97 ntBASIC-1.24□□□□□ -2.61
HLA-DQB2P05538 SNORA40.17-201ENST00000517256 115 ntBASIC-1.24□□□□□ -2.61
HLA-DQB2P05538 IGHVII-40-1-201ENST00000517316 58 ntBASIC-1.24□□□□□ -2.61
HLA-DQB2P05538 MIR5704-201ENST00000584029 77 ntBASIC-1.24□□□□□ -2.61
HLA-DQB2P05538 MIR6086-201ENST00000638065 55 ntBASIC-1.24□□□□□ -2.61
HLA-DQB2P05538 Y_RNA.19-201ENST00000362462 99 ntBASIC-1.25□□□□□ -2.61
HLA-DQB2P05538 Y_RNA.52-201ENST00000362760 96 ntBASIC-1.25□□□□□ -2.61
HLA-DQB2P05538 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.25□□□□□ -2.61
HLA-DQB2P05538 RNU6-806P-201ENST00000365147 105 ntBASIC-1.25□□□□□ -2.61
HLA-DQB2P05538 MIR517B-201ENST00000385102 67 ntBASIC-1.25□□□□□ -2.61
HLA-DQB2P05538 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.25□□□□□ -2.61
HLA-DQB2P05538 RNU7-164P-201ENST00000459221 62 ntBASIC-1.25□□□□□ -2.61
HLA-DQB2P05538 RNU6-240P-201ENST00000516098 97 ntBASIC-1.25□□□□□ -2.61
HLA-DQB2P05538 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.25□□□□□ -2.61
HLA-DQB2P05538 AL442663.2-201ENST00000554385 511 ntBASIC-1.25□□□□□ -2.61
HLA-DQB2P05538 AC021443.1-201ENST00000604478 211 ntBASIC-1.25□□□□□ -2.61
HLA-DQB2P05538 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-1.25□□□□□ -2.61
HLA-DQB2P05538 AL365265.1-201ENST00000621045 234 ntBASIC-1.25□□□□□ -2.61
HLA-DQB2P05538 Y_RNA.70-201ENST00000362886 110 ntBASIC-1.26□□□□□ -2.61
HLA-DQB2P05538 Y_RNA.82-201ENST00000363000 102 ntBASIC-1.26□□□□□ -2.61
HLA-DQB2P05538 Y_RNA.92-201ENST00000363043 102 ntBASIC-1.26□□□□□ -2.61
HLA-DQB2P05538 RNU6-103P-201ENST00000363686 107 ntBASIC-1.26□□□□□ -2.61
HLA-DQB2P05538 RNU6-770P-201ENST00000363929 105 ntBASIC-1.26□□□□□ -2.61
HLA-DQB2P05538 Y_RNA.235-201ENST00000364412 102 ntBASIC-1.26□□□□□ -2.61
HLA-DQB2P05538 Y_RNA.306-201ENST00000365015 102 ntBASIC-1.26□□□□□ -2.61
HLA-DQB2P05538 Y_RNA.312-201ENST00000365089 102 ntBASIC-1.26□□□□□ -2.61
HLA-DQB2P05538 Y_RNA.322-201ENST00000365151 102 ntBASIC-1.26□□□□□ -2.61
HLA-DQB2P05538 RNU4-17P-201ENST00000365598 141 ntBASIC-1.26□□□□□ -2.61
HLA-DQB2P05538 ELOCP20-201ENST00000422460 345 ntBASIC-1.26□□□□□ -2.61
HLA-DQB2P05538 AL161932.1-201ENST00000437408 146 ntBASIC-1.26□□□□□ -2.61
HLA-DQB2P05538 Y_RNA.650-201ENST00000459002 102 ntBASIC-1.26□□□□□ -2.61
HLA-DQB2P05538 AC022137.1-201ENST00000483735 151 ntBASIC-1.26□□□□□ -2.61
HLA-DQB2P05538 Y_RNA.777-201ENST00000516982 102 ntBASIC-1.26□□□□□ -2.61
HLA-DQB2P05538 Y_RNA.771-201ENST00000598668 102 ntBASIC-1.26□□□□□ -2.61
HLA-DQB2P05538 AC087741.2-201ENST00000619415 172 ntBASIC-1.26□□□□□ -2.61
HLA-DQB2P05538 TRDV1-202ENST00000621643 102 ntBASIC-1.26□□□□□ -2.61
HLA-DQB2P05538 Y_RNA.789-201ENST00000622480 102 ntBASIC-1.26□□□□□ -2.61
HLA-DQB2P05538 U6.100-201ENST00000636230 99 ntBASIC-1.26□□□□□ -2.61
HLA-DQB2P05538 Y_RNA.26-201ENST00000362539 101 ntBASIC-1.27□□□□□ -2.61
HLA-DQB2P05538 Y_RNA.197-201ENST00000364004 102 ntBASIC-1.27□□□□□ -2.61
HLA-DQB2P05538 RNU6-973P-201ENST00000364690 107 ntBASIC-1.27□□□□□ -2.61
HLA-DQB2P05538 RNU6-101P-201ENST00000410323 104 ntBASIC-1.27□□□□□ -2.61
HLA-DQB2P05538 MTND5P22-201ENST00000458380 195 ntBASIC-1.27□□□□□ -2.61
HLA-DQB2P05538 RNU7-123P-201ENST00000515911 60 ntBASIC-1.27□□□□□ -2.61
HLA-DQB2P05538 RNU6-1338P-201ENST00000516328 91 ntBASIC-1.27□□□□□ -2.61
HLA-DQB2P05538 AC138907.4-201ENST00000570107 226 ntBASIC-1.27□□□□□ -2.61
HLA-DQB2P05538 Y_RNA.44-201ENST00000362676 108 ntBASIC-1.28□□□□□ -2.61
HLA-DQB2P05538 Y_RNA.214-201ENST00000364201 112 ntBASIC-1.28□□□□□ -2.61
HLA-DQB2P05538 RNY4P3-201ENST00000365254 95 ntBASIC-1.28□□□□□ -2.61
HLA-DQB2P05538 Y_RNA.447-201ENST00000384184 113 ntBASIC-1.28□□□□□ -2.61
HLA-DQB2P05538 RNU6-616P-201ENST00000384353 107 ntBASIC-1.28□□□□□ -2.61
HLA-DQB2P05538 RNU6-1109P-201ENST00000391187 107 ntBASIC-1.28□□□□□ -2.61
HLA-DQB2P05538 Y_RNA.596-201ENST00000410462 109 ntBASIC-1.28□□□□□ -2.61
HLA-DQB2P05538 AP000533.3-201ENST00000447704 118 ntBASIC-1.28□□□□□ -2.61
HLA-DQB2P05538 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.28□□□□□ -2.61
HLA-DQB2P05538 Y_RNA.84-201ENST00000363011 104 ntBASIC-1.29□□□□□ -2.62
HLA-DQB2P05538 Y_RNA.207-201ENST00000364142 106 ntBASIC-1.29□□□□□ -2.62
HLA-DQB2P05538 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.29□□□□□ -2.62
HLA-DQB2P05538 SNORD115-35-201ENST00000365122 82 ntBASIC-1.29□□□□□ -2.62
HLA-DQB2P05538 Y_RNA.416-201ENST00000384014 113 ntBASIC-1.29□□□□□ -2.62
HLA-DQB2P05538 MIR34C-201ENST00000384831 77 ntBASIC-1.29□□□□□ -2.62
HLA-DQB2P05538 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.29□□□□□ -2.62
HLA-DQB2P05538 MIR4744-201ENST00000581563 82 ntBASIC-1.29□□□□□ -2.62
HLA-DQB2P05538 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-1.29□□□□□ -2.62
HLA-DQB2P05538 Y_RNA.360-201ENST00000365512 102 ntBASIC-1.3□□□□□ -2.62
HLA-DQB2P05538 Y_RNA.590-201ENST00000410140 107 ntBASIC-1.3□□□□□ -2.62
HLA-DQB2P05538 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-1.3□□□□□ -2.62
HLA-DQB2P05538 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.3□□□□□ -2.62
HLA-DQB2P05538 SNORD27-201ENST00000363981 72 ntBASIC-1.31□□□□□ -2.62
HLA-DQB2P05538 Y_RNA.276-201ENST00000364732 109 ntBASIC-1.31□□□□□ -2.62
HLA-DQB2P05538 Y_RNA.579-201ENST00000390939 94 ntBASIC-1.31□□□□□ -2.62
HLA-DQB2P05538 RNU6-1254P-201ENST00000391266 104 ntBASIC-1.31□□□□□ -2.62
HLA-DQB2P05538 FGF7P4-201ENST00000509595 295 ntBASIC-1.31□□□□□ -2.62
HLA-DQB2P05538 Y_RNA.679-201ENST00000516416 91 ntBASIC-1.31□□□□□ -2.62
HLA-DQB2P05538 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.31□□□□□ -2.62
HLA-DQB2P05538 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.32□□□□□ -2.62
HLA-DQB2P05538 Y_RNA.437-201ENST00000384113 113 ntBASIC-1.32□□□□□ -2.62
HLA-DQB2P05538 Y_RNA.556-201ENST00000384677 113 ntBASIC-1.32□□□□□ -2.62
HLA-DQB2P05538 RNU6-476P-201ENST00000384726 107 ntBASIC-1.32□□□□□ -2.62
HLA-DQB2P05538 RNU6-243P-201ENST00000391140 107 ntBASIC-1.32□□□□□ -2.62
HLA-DQB2P05538 AL500527.2-201ENST00000454105 95 ntBASIC-1.32□□□□□ -2.62
HLA-DQB2P05538 MIR6854-201ENST00000614935 69 ntBASIC-1.32□□□□□ -2.62
HLA-DQB2P05538 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.33□□□□□ -2.62
HLA-DQB2P05538 Y_RNA.518-201ENST00000384552 113 ntBASIC-1.33□□□□□ -2.62
HLA-DQB2P05538 Y_RNA.521-201ENST00000384560 114 ntBASIC-1.33□□□□□ -2.62
HLA-DQB2P05538 RNU6-578P-201ENST00000390980 103 ntBASIC-1.33□□□□□ -2.62
HLA-DQB2P05538 AC138393.2-201ENST00000414742 246 ntBASIC-1.33□□□□□ -2.62
HLA-DQB2P05538 SNORD2-201ENST00000459163 69 ntBASIC-1.33□□□□□ -2.62
HLA-DQB2P05538 AC097510.1-201ENST00000510945 133 ntBASIC-1.33□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 186.6 ms