Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 Y_RNA.701-201ENST00000516812 110 ntBASIC-0.54□□□□□ -2.5
MT-ND4P03905 RNU7-188P-201ENST00000517063 64 ntBASIC-0.54□□□□□ -2.5
MT-ND4P03905 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-0.54□□□□□ -2.5
MT-ND4P03905 MIR4263-201ENST00000584745 83 ntBASIC-0.54□□□□□ -2.5
MT-ND4P03905 MIR376B-201ENST00000614515 100 ntBASIC-0.54□□□□□ -2.5
MT-ND4P03905 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.54□□□□□ -2.5
MT-ND4P03905 RNA5SP205-201ENST00000364653 136 ntBASIC-0.55□□□□□ -2.5
MT-ND4P03905 Y_RNA.298-201ENST00000364960 107 ntBASIC-0.55□□□□□ -2.5
MT-ND4P03905 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.55□□□□□ -2.5
MT-ND4P03905 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.55□□□□□ -2.5
MT-ND4P03905 MTND2P23-201ENST00000422990 651 ntBASIC-0.55□□□□□ -2.5
MT-ND4P03905 AL117351.2-201ENST00000513571 157 ntBASIC-0.55□□□□□ -2.5
MT-ND4P03905 MIR548AG2-201ENST00000581228 64 ntBASIC-0.55□□□□□ -2.5
MT-ND4P03905 MIR3149-201ENST00000584629 83 ntBASIC-0.55□□□□□ -2.5
MT-ND4P03905 RNU6-867P-201ENST00000364956 107 ntBASIC-0.56□□□□□ -2.5
MT-ND4P03905 RNU6-616P-201ENST00000384353 107 ntBASIC-0.56□□□□□ -2.5
MT-ND4P03905 MIR519E-201ENST00000385075 84 ntBASIC-0.56□□□□□ -2.5
MT-ND4P03905 MIR548H3-201ENST00000408771 118 ntBASIC-0.56□□□□□ -2.5
MT-ND4P03905 SNORD126-201ENST00000459475 77 ntBASIC-0.56□□□□□ -2.5
MT-ND4P03905 AC044792.1-201ENST00000593294 196 ntBASIC-0.56□□□□□ -2.5
MT-ND4P03905 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.56□□□□□ -2.5
MT-ND4P03905 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.57□□□□□ -2.5
MT-ND4P03905 RNA5SP98-201ENST00000363158 137 ntBASIC-0.57□□□□□ -2.5
MT-ND4P03905 RNU6-508P-201ENST00000363231 103 ntBASIC-0.57□□□□□ -2.5
MT-ND4P03905 SNORD27-201ENST00000363981 72 ntBASIC-0.57□□□□□ -2.5
MT-ND4P03905 SNORD115-35-201ENST00000365122 82 ntBASIC-0.57□□□□□ -2.5
MT-ND4P03905 RNU6-571P-201ENST00000384128 107 ntBASIC-0.57□□□□□ -2.5
MT-ND4P03905 MIR181B2-201ENST00000385004 89 ntBASIC-0.57□□□□□ -2.5
MT-ND4P03905 MIR548F4-201ENST00000408515 105 ntBASIC-0.57□□□□□ -2.5
MT-ND4P03905 AC093423.1-201ENST00000440817 142 ntBASIC-0.57□□□□□ -2.5
MT-ND4P03905 SNORD127-201ENST00000458892 86 ntBASIC-0.57□□□□□ -2.5
MT-ND4P03905 Y_RNA.720-201ENST00000517166 92 ntBASIC-0.57□□□□□ -2.5
MT-ND4P03905 AC069503.3-201ENST00000618674 145 ntBASIC-0.57□□□□□ -2.5
MT-ND4P03905 uc_338.10-201ENST00000621872 182 ntBASIC-0.57□□□□□ -2.5
MT-ND4P03905 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.58□□□□□ -2.5
MT-ND4P03905 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.58□□□□□ -2.5
MT-ND4P03905 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.58□□□□□ -2.5
MT-ND4P03905 MIR617-201ENST00000385030 97 ntBASIC-0.58□□□□□ -2.5
MT-ND4P03905 SNORA75.5-201ENST00000391291 81 ntBASIC-0.58□□□□□ -2.5
MT-ND4P03905 AL603914.1-201ENST00000401964 204 ntBASIC-0.58□□□□□ -2.5
MT-ND4P03905 Y_RNA.651-201ENST00000459380 103 ntBASIC-0.58□□□□□ -2.5
MT-ND4P03905 YWHAEP2-201ENST00000580066 112 ntBASIC-0.58□□□□□ -2.5
MT-ND4P03905 AL590491.3-201ENST00000610731 82 ntBASIC-0.58□□□□□ -2.5
MT-ND4P03905 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.59□□□□□ -2.5
MT-ND4P03905 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-0.59□□□□□ -2.5
MT-ND4P03905 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.59□□□□□ -2.5
MT-ND4P03905 RNU6-1153P-201ENST00000516760 105 ntBASIC-0.59□□□□□ -2.5
MT-ND4P03905 RNU6-850P-201ENST00000516934 103 ntBASIC-0.59□□□□□ -2.5
MT-ND4P03905 MIR548AZ-201ENST00000616567 95 ntBASIC-0.59□□□□□ -2.5
MT-ND4P03905 MIR6759-201ENST00000638110 65 ntBASIC-0.59□□□□□ -2.5
MT-ND4P03905 SNORD114-11-201ENST00000363738 75 ntBASIC-0.6□□□□□ -2.51
MT-ND4P03905 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.6□□□□□ -2.51
MT-ND4P03905 RNU6-1227P-201ENST00000383981 107 ntBASIC-0.6□□□□□ -2.51
MT-ND4P03905 RNU6-588P-201ENST00000410281 105 ntBASIC-0.6□□□□□ -2.51
MT-ND4P03905 AC107027.2-201ENST00000512197 115 ntBASIC-0.6□□□□□ -2.51
MT-ND4P03905 MIR548AE1-201ENST00000583292 70 ntBASIC-0.6□□□□□ -2.51
MT-ND4P03905 AP001180.6-201ENST00000584918 159 ntBASIC-0.6□□□□□ -2.51
MT-ND4P03905 MIR6779-201ENST00000617283 64 ntBASIC-0.6□□□□□ -2.51
MT-ND4P03905 MIR7111-201ENST00000619751 72 ntBASIC-0.6□□□□□ -2.51
MT-ND4P03905 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.61□□□□□ -2.51
MT-ND4P03905 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.61□□□□□ -2.51
MT-ND4P03905 MIR34C-201ENST00000384831 77 ntBASIC-0.61□□□□□ -2.51
MT-ND4P03905 MIR516A2-201ENST00000384888 90 ntBASIC-0.61□□□□□ -2.51
MT-ND4P03905 MIR516A1-201ENST00000385033 90 ntBASIC-0.61□□□□□ -2.51
MT-ND4P03905 MIR196A2-201ENST00000385189 110 ntBASIC-0.61□□□□□ -2.51
MT-ND4P03905 RNU6-918P-201ENST00000391219 106 ntBASIC-0.61□□□□□ -2.51
MT-ND4P03905 SNORD58.1-201ENST00000391313 66 ntBASIC-0.61□□□□□ -2.51
MT-ND4P03905 RNY4P20-201ENST00000516678 93 ntBASIC-0.61□□□□□ -2.51
MT-ND4P03905 AC087741.2-201ENST00000619415 172 ntBASIC-0.61□□□□□ -2.51
MT-ND4P03905 MIR6844-201ENST00000637122 62 ntBASIC-0.61□□□□□ -2.51
MT-ND4P03905 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.61□□□□□ -2.51
MT-ND4P03905 RNY1P11-201ENST00000363759 113 ntBASIC-0.62□□□□□ -2.51
MT-ND4P03905 RNU6-309P-201ENST00000364573 106 ntBASIC-0.62□□□□□ -2.51
MT-ND4P03905 Y_RNA.288-201ENST00000364854 92 ntBASIC-0.62□□□□□ -2.51
MT-ND4P03905 Y_RNA.337-201ENST00000365312 102 ntBASIC-0.62□□□□□ -2.51
MT-ND4P03905 SNORD115-44-201ENST00000365391 82 ntBASIC-0.62□□□□□ -2.51
MT-ND4P03905 Y_RNA.422-201ENST00000384054 114 ntBASIC-0.62□□□□□ -2.51
MT-ND4P03905 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.62□□□□□ -2.51
MT-ND4P03905 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.62□□□□□ -2.51
MT-ND4P03905 Y_RNA.556-201ENST00000384677 113 ntBASIC-0.62□□□□□ -2.51
MT-ND4P03905 RNU6-175P-201ENST00000516896 107 ntBASIC-0.62□□□□□ -2.51
MT-ND4P03905 MIR4460-201ENST00000577862 86 ntBASIC-0.62□□□□□ -2.51
MT-ND4P03905 SNORD114-29-201ENST00000364819 70 ntBASIC-0.63□□□□□ -2.51
MT-ND4P03905 SNORA32.3-201ENST00000384772 121 ntBASIC-0.63□□□□□ -2.51
MT-ND4P03905 MIR2113-201ENST00000459007 91 ntBASIC-0.63□□□□□ -2.51
MT-ND4P03905 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.63□□□□□ -2.51
MT-ND4P03905 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.63□□□□□ -2.51
MT-ND4P03905 FTX_2.1-201ENST00000618816 94 ntBASIC-0.63□□□□□ -2.51
MT-ND4P03905 Y_RNA.47-201ENST00000362697 108 ntBASIC-0.64□□□□□ -2.51
MT-ND4P03905 RNU6-797P-201ENST00000363101 109 ntBASIC-0.64□□□□□ -2.51
MT-ND4P03905 SNORD18B-201ENST00000365659 72 ntBASIC-0.64□□□□□ -2.51
MT-ND4P03905 MIR539-201ENST00000365690 78 ntBASIC-0.64□□□□□ -2.51
MT-ND4P03905 SNORA51.5-201ENST00000384126 131 ntBASIC-0.64□□□□□ -2.51
MT-ND4P03905 RNU6-284P-201ENST00000411105 106 ntBASIC-0.64□□□□□ -2.51
MT-ND4P03905 RNU6-287P-201ENST00000516230 98 ntBASIC-0.64□□□□□ -2.51
MT-ND4P03905 AL117187.1-201ENST00000555482 181 ntBASIC-0.64□□□□□ -2.51
MT-ND4P03905 AC108081.1-201ENST00000604358 221 ntBASIC-0.64□□□□□ -2.51
MT-ND4P03905 AL137067.1-201ENST00000615933 120 ntBASIC-0.64□□□□□ -2.51
MT-ND4P03905 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.64□□□□□ -2.51
MT-ND4P03905 Y_RNA.20-201ENST00000362479 113 ntBASIC-0.65□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 184.9 ms